EnhancerDB
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  3. vista39962[chr3:11645125-11645451]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39962[chr3:11645125-11645451]
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Tissue distribution of vista39962
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Transcription factor that possibly regulate vista39962[chr3:11645125-11645451]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 11645123 11645359 CEBPB UCSC Txn Factor no Conserved 108528208
chr3 11645125 11645138 DUXA JASPAR yes 435366
chr3 11645125 11645138 DUXA JASPAR yes 70937469
chr3 11645126 11645137 DUX4 JASPAR yes 435367
chr3 11645126 11645137 DUX4 JASPAR yes 70937470
chr3 11645126 11645141 MAFK JASPAR yes 435368
chr3 11645126 11645141 MAFK JASPAR yes 70937471
chr3 11645135 11645147 YY1 JASPAR yes 435369
chr3 11645135 11645147 YY1 JASPAR yes 70937472
chr3 11645144 11645154 TFAP4 JASPAR yes 435370
chr3 11645144 11645154 TFAP4 JASPAR yes 70937473
chr3 11645150 11645167 RXRA JASPAR yes 435371
chr3 11645150 11645167 RXRA JASPAR yes 70937474
chr3 11645186 11645200 TLX1 JASPAR yes 435372
chr3 11645186 11645200 TLX1 JASPAR yes 70937475
chr3 11645221 11645233 ZBTB7B JASPAR yes 435373
chr3 11645221 11645233 ZBTB7C JASPAR yes 435374
chr3 11645221 11645233 ZBTB7B JASPAR yes 70937476
chr3 11645221 11645233 ZBTB7C JASPAR yes 70937477
chr3 11645231 11645242 RUNX1 JASPAR yes 435375
chr3 11645231 11645242 RUNX1 JASPAR yes 70937478
chr3 11645237 11645241 ESR1 TRANSFAC yes 435376
chr3 11645237 11645241 ESR1 TRANSFAC yes 70937479
chr3 11645243 11645247 YY1 TRANSFAC yes 435377
chr3 11645243 11645247 YY1 TRANSFAC yes 70937480
chr3 11645243 11645256 ATF4 JASPAR yes 435378
chr3 11645243 11645256 ATF4 JASPAR yes 70937481
chr3 11645254 11645267 ZBTB18 JASPAR yes 435379
chr3 11645254 11645267 ZBTB18 JASPAR yes 70937482
chr3 11645256 11645266 MSC JASPAR yes 435380
chr3 11645256 11645266 MSC JASPAR yes 70937483
chr3 11645266 11645279 SCRT2 JASPAR yes 435381
chr3 11645266 11645279 SCRT2 JASPAR yes 70937484
chr3 11645272 11645291 RFX2 JASPAR yes 435382
chr3 11645272 11645291 RFX2 JASPAR yes 70937485
chr3 11645274 11645289 RFX5 JASPAR yes 435383
chr3 11645274 11645289 RFX5 JASPAR yes 70937486
chr3 11645276 11645292 RFX2 JASPAR yes 435384
chr3 11645276 11645292 RFX3 JASPAR yes 435385
chr3 11645276 11645292 RFX4 JASPAR yes 435386
chr3 11645276 11645292 RFX5 JASPAR yes 435387
chr3 11645276 11645292 RFX2 JASPAR yes 70937487
chr3 11645276 11645292 RFX3 JASPAR yes 70937488
chr3 11645276 11645292 RFX4 JASPAR yes 70937489
chr3 11645276 11645292 RFX5 JASPAR yes 70937490
chr3 11645282 11645292 NFATC3 JASPAR yes 435388
chr3 11645282 11645292 NFATC3 JASPAR yes 70937491
chr3 11645284 11645291 NFATC2 JASPAR yes 435389
chr3 11645284 11645291 NFATC2 JASPAR yes 70937492
chr3 11645285 11645293 FOXO3 JASPAR yes 435390
chr3 11645285 11645293 FOXO3 JASPAR yes 70937493
chr3 11645316 11645334 SRF JASPAR yes 435391
chr3 11645316 11645334 SRF JASPAR yes 70937494
chr3 11645336 11645347 BATF JASPAR yes 435392
chr3 11645336 11645347 BATF JASPAR yes 70937495
chr3 11645345 11645356 GCM1 JASPAR yes 435393
chr3 11645345 11645356 GCM1 JASPAR yes 70937496
chr3 11645363 11645384 IRF1 JASPAR yes 435394
chr3 11645363 11645384 IRF1 JASPAR yes 70937497
chr3 11645365 11645380 IRF9 JASPAR yes 435395
chr3 11645365 11645380 IRF9 JASPAR yes 70937498
chr3 11645366 11645372 ETS1 JASPAR yes 435396
chr3 11645366 11645372 ETS1 JASPAR yes 70937499
chr3 11645366 11645380 IRF7 JASPAR yes 435397
chr3 11645366 11645380 IRF7 JASPAR yes 70937500
chr3 11645367 11645381 STAT1 JASPAR yes 435398
chr3 11645367 11645381 STAT1 JASPAR yes 70937501
chr3 11645367 11645382 STAT2 JASPAR yes 435399
chr3 11645367 11645382 STAT2 JASPAR yes 70937502
chr3 11645367 11645385 IRF2 JASPAR yes 435400
chr3 11645367 11645385 IRF2 JASPAR yes 70937503
chr3 11645368 11645380 IRF1 JASPAR yes 435401
chr3 11645368 11645380 IRF1 JASPAR yes 70937504
chr3 11645395 11645416 ZNF263 JASPAR yes 435402
chr3 11645395 11645416 ZNF263 JASPAR yes 70937505
chr3 11645404 11645425 ZNF263 JASPAR yes 435403
chr3 11645404 11645425 ZNF263 JASPAR yes 70937506
chr3 11645406 11645412 SP1 TRANSFAC yes 435404
chr3 11645406 11645412 SP1 TRANSFAC yes 70937507
chr3 11645406 11645416 SP1 JASPAR yes 435405
chr3 11645406 11645416 SP1 JASPAR yes 70937508
chr3 11645410 11645416 MZF1 JASPAR yes 435406
chr3 11645410 11645416 MZF1 JASPAR yes 70937509
chr3 11645415 11645425 NFATC3 JASPAR yes 435407
chr3 11645415 11645425 NFATC3 JASPAR yes 70937510
chr3 11645424 11645435 HOXC13 JASPAR yes 435408
chr3 11645424 11645435 HOXC13 JASPAR yes 70937511
chr3 11645441 11645456 FOXA1 JASPAR yes 435409
chr3 11645441 11645456 FOXA1 JASPAR yes 70937512
chr3 11645443 11645455 FOXC2 JASPAR yes 435410
chr3 11645443 11645455 FOXC2 JASPAR yes 70937513
chr3 11645443 11645457 POU1F1 JASPAR yes 435411
chr3 11645443 11645457 POU1F1 JASPAR yes 70937514
chr3 11645444 11645455 FOXC1 JASPAR yes 435412
chr3 11645444 11645455 FOXC1 JASPAR yes 70937515
chr3 11645445 11645456 FOXA1 JASPAR yes 435413
chr3 11645445 11645456 FOXA1 JASPAR yes 70937516
chr3 11645448 11645462 POU4F1 JASPAR yes 435414
chr3 11645448 11645462 POU4F1 JASPAR yes 70937517
chr3 11645448 11645464 POU4F2 JASPAR yes 435415
chr3 11645448 11645464 POU4F3 JASPAR yes 435416
chr3 11645448 11645464 POU4F2 JASPAR yes 70937518
chr3 11645448 11645464 POU4F3 JASPAR yes 70937519
chr3 11645451 11645455 YY1 TRANSFAC yes 435417
chr3 11645451 11645455 YY1 TRANSFAC yes 70937520
chr3 11645451 11645465 NR2F1 JASPAR yes 435418
chr3 11645451 11645465 NR2F1 JASPAR yes 70937521
SNP sites on vista39962[chr3:11645125-11645451]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 11645141 rs181024263 T C
CEBPB MAFK YY1
6550077
chr3 11645183 rs185858058 C T
CEBPB
6550078
chr3 11645358 rs148870319 A G
CEBPB
6550079
chr3 11645368 rs143568431 G A
ETS1 IRF1 IRF2 IRF7 IRF9 STAT1 STAT2
6550080
Genes possibly regulated by vista39962[chr3:11645125-11645451]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista39962[chr3:11645125-11645451]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results