EnhancerDB
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  3. vista39964[chr3:11759856-11760132]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39964[chr3:11759856-11760132]
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Tissue distribution of vista39964
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Transcription factor that possibly regulate vista39964[chr3:11759856-11760132]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 11759896 11762413 POLR2A UCSC Txn Factor no Conserved 108528209
chr3 11759860 11759868 NR4A2 JASPAR yes 446645
chr3 11759860 11759868 NR4A2 JASPAR yes 70937522
chr3 11759860 11759873 EOMES JASPAR yes 446646
chr3 11759860 11759873 EOMES JASPAR yes 70937523
chr3 11759863 11759873 SREBF1 JASPAR yes 446647
chr3 11759863 11759873 SREBF2 JASPAR yes 446648
chr3 11759863 11759873 SREBF1 JASPAR yes 70937524
chr3 11759863 11759873 SREBF2 JASPAR yes 70937525
chr3 11759864 11759872 MGA JASPAR yes 446649
chr3 11759864 11759872 MGA JASPAR yes 70937526
chr3 11759865 11759880 RUNX2 JASPAR yes 446650
chr3 11759865 11759880 RUNX2 JASPAR yes 70937527
chr3 11759899 11759917 ESR2 JASPAR yes 446651
chr3 11759899 11759917 ESR2 JASPAR yes 70937528
chr3 11759924 11759935 E2F6 JASPAR yes 446652
chr3 11759924 11759935 E2F6 JASPAR yes 70937529
chr3 11759938 11759959 MAFG JASPAR yes 446653
chr3 11759938 11759959 MAFG JASPAR yes 70937530
chr3 11759940 11759951 NRF1 JASPAR yes 446654
chr3 11759940 11759951 NRF1 JASPAR yes 70937531
chr3 11759953 11759957 YY1 TRANSFAC yes 446655
chr3 11759953 11759957 YY1 TRANSFAC yes 70937532
chr3 11759965 11759976 FLI1 JASPAR yes 446656
chr3 11759965 11759976 FLI1 JASPAR yes 70937533
chr3 11759968 11759977 SRY JASPAR yes 446657
chr3 11759968 11759977 SRY JASPAR yes 70937534
chr3 11759970 11759979 SOX9 JASPAR yes 446658
chr3 11759970 11759979 SOX9 JASPAR yes 70937535
chr3 11760013 11760027 RXRB JASPAR yes 446659
chr3 11760013 11760027 RXRG JASPAR yes 446660
chr3 11760013 11760027 RXRB JASPAR yes 70937536
chr3 11760013 11760027 RXRG JASPAR yes 70937537
chr3 11760028 11760037 POU3F4 JASPAR yes 446661
chr3 11760028 11760037 POU3F4 JASPAR yes 70937538
chr3 11760033 11760036 MYB TRANSFAC yes 446662
chr3 11760033 11760036 MYB TRANSFAC yes 70937539
chr3 11760039 11760051 POU2F1 JASPAR yes 446663
chr3 11760039 11760051 POU2F1 JASPAR yes 70937540
chr3 11760040 11760053 POU2F2 JASPAR yes 446664
chr3 11760040 11760053 POU2F2 JASPAR yes 70937541
chr3 11760041 11760050 POU3F4 JASPAR yes 446665
chr3 11760041 11760050 POU5F1B JASPAR yes 446666
chr3 11760041 11760050 POU3F4 JASPAR yes 70937542
chr3 11760041 11760050 POU5F1B JASPAR yes 70937543
chr3 11760049 11760060 ESRRA JASPAR yes 446667
chr3 11760049 11760060 ESRRB JASPAR yes 446668
chr3 11760049 11760060 ESRRA JASPAR yes 70937544
chr3 11760049 11760060 ESRRB JASPAR yes 70937545
chr3 11760050 11760058 NR4A2 JASPAR yes 446669
chr3 11760050 11760058 NR4A2 JASPAR yes 70937546
chr3 11760051 11760061 RORA JASPAR yes 446670
chr3 11760051 11760061 RORA JASPAR yes 70937547
chr3 11760051 11760065 RXRB JASPAR yes 446671
chr3 11760051 11760065 RXRG JASPAR yes 446672
chr3 11760051 11760065 RXRB JASPAR yes 70937548
chr3 11760051 11760065 RXRG JASPAR yes 70937549
chr3 11760066 11760078 POU2F1 JASPAR yes 446673
chr3 11760066 11760078 POU2F1 JASPAR yes 70937550
chr3 11760066 11760079 POU3F3 JASPAR yes 446674
chr3 11760066 11760079 POU3F3 JASPAR yes 70937551
chr3 11760066 11760080 POU1F1 JASPAR yes 446675
chr3 11760066 11760080 POU1F1 JASPAR yes 70937552
chr3 11760067 11760079 POU3F1 JASPAR yes 446676
chr3 11760067 11760079 POU3F2 JASPAR yes 446677
chr3 11760067 11760079 POU3F1 JASPAR yes 70937553
chr3 11760067 11760079 POU3F2 JASPAR yes 70937554
chr3 11760067 11760080 POU2F2 JASPAR yes 446678
chr3 11760067 11760080 POU2F2 JASPAR yes 70937555
chr3 11760073 11760083 PAX3 JASPAR yes 446679
chr3 11760073 11760083 PAX7 JASPAR yes 446680
chr3 11760073 11760083 PAX3 JASPAR yes 70937556
chr3 11760073 11760083 PAX7 JASPAR yes 70937557
chr3 11760074 11760095 IRF1 JASPAR yes 446681
chr3 11760074 11760095 IRF1 JASPAR yes 70937558
chr3 11760075 11760096 IRF1 JASPAR yes 446682
chr3 11760075 11760096 IRF1 JASPAR yes 70937559
chr3 11760080 11760095 MEF2C JASPAR yes 446683
chr3 11760080 11760095 MEF2C JASPAR yes 70937560
chr3 11760095 11760110 MEF2A JASPAR yes 446684
chr3 11760095 11760110 MEF2A JASPAR yes 70937561
chr3 11760097 11760109 MEF2D JASPAR yes 446685
chr3 11760097 11760109 MEF2D JASPAR yes 70937562
chr3 11760099 11760103 YY1 TRANSFAC yes 446686
chr3 11760099 11760103 YY1 TRANSFAC yes 70937563
chr3 11760104 11760111 SPIB JASPAR yes 446687
chr3 11760104 11760111 SPIB JASPAR yes 70937564
chr3 11760110 11760120 MYF6 JASPAR yes 446688
chr3 11760110 11760120 MYF6 JASPAR yes 70937565
chr3 11760113 11760126 SMAD2 JASPAR yes 446689
chr3 11760113 11760126 SMAD2 JASPAR yes 70937566
SNP sites on vista39964[chr3:11759856-11760132]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 11759916 rs117840031 T C
ESR2 POLR2A
6551315
chr3 11759922 rs138534072 C G
POLR2A
6551316
chr3 11759963 rs144133110 C A
POLR2A
6551317
chr3 11759984 rs186640435 T C
POLR2A
6551318
chr3 11760013 rs570618906 AAG A
POLR2A RXRB RXRG
6551319
chr3 11760080 rs147330107 A ATT
IRF1 MEF2C PAX3 PAX7 POLR2A POU1F1 POU2F2
6551320
chr3 11760080 rs567896491 A ATT
IRF1 MEF2C PAX3 PAX7 POLR2A POU1F1 POU2F2
6551321
chr3 11760104 rs78260553 T A
MEF2A MEF2D POLR2A SPIB
6551322
Genes possibly regulated by vista39964[chr3:11759856-11760132]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 11597544 11762220 - VGLL4 ENSG00000144560.9 11762220 0.79 1.0 3412 97912
Expression level of Genes
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miRNAs possibly regulated by vista39964[chr3:11759856-11760132]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results