EnhancerDB
  1. Home
  2. Enhancers
  3. vista39966[chr3:11950645-11950991]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39966[chr3:11950645-11950991]
Back to top
Tissue distribution of vista39966
Back to top
Transcription factor that possibly regulate vista39966[chr3:11950645-11950991]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 11950646 11950651 SP1 TRANSFAC yes 70937593
chr3 11950646 11950658 GLI2 JASPAR yes 70937594
chr3 11950655 11950669 CREB3L1 JASPAR yes 70937595
chr3 11950656 11950666 MAX JASPAR yes 70937596
chr3 11950656 11950667 USF2 JASPAR yes 70937597
chr3 11950656 11950668 HES5 JASPAR yes 70937598
chr3 11950656 11950668 HES7 JASPAR yes 70937599
chr3 11950657 11950667 BHLHE40 JASPAR yes 70937600
chr3 11950657 11950667 HEY1 JASPAR yes 70937601
chr3 11950657 11950667 HEY2 JASPAR yes 70937602
chr3 11950657 11950667 MAX JASPAR yes 70937603
chr3 11950657 11950667 MLX JASPAR yes 70937604
chr3 11950657 11950667 MNT JASPAR yes 70937605
chr3 11950657 11950667 TFE3 JASPAR yes 70937606
chr3 11950657 11950667 TFEB JASPAR yes 70937607
chr3 11950657 11950668 USF2 JASPAR yes 70937608
chr3 11950658 11950665 USF1 JASPAR yes 70937609
chr3 11950658 11950668 MAX JASPAR yes 70937610
chr3 11950659 11950664 MYC TRANSFAC yes 70937611
chr3 11950659 11950664 USF1 TRANSFAC yes 70937612
chr3 11950659 11950664 USF2 TRANSFAC yes 70937613
chr3 11950662 11950671 HIC2 JASPAR yes 70937614
chr3 11950689 11950710 ZNF263 JASPAR yes 70937615
chr3 11950709 11950713 YY1 TRANSFAC yes 70937616
chr3 11950711 11950719 GATA3 JASPAR yes 70937617
chr3 11950727 11950739 YY1 JASPAR yes 70937618
chr3 11950730 11950736 YY1 JASPAR yes 70937619
chr3 11950749 11950753 NFE TRANSFAC yes 70937620
chr3 11950749 11950754 GATA1 TRANSFAC yes 70937621
chr3 11950749 11950755 GATA3 JASPAR yes 70937622
chr3 11950777 11950783 ETS1 JASPAR yes 70937623
chr3 11950786 11950795 SNAI2 JASPAR yes 70937624
chr3 11950786 11950796 TCF4 JASPAR yes 70937625
chr3 11950788 11950797 ZEB1 JASPAR yes 70937626
chr3 11950790 11950795 SP1 TRANSFAC yes 70937627
chr3 11950792 11950798 ESR1 TRANSFAC yes 70937628
chr3 11950792 11950810 ESR1 JASPAR yes 70937629
chr3 11950794 11950798 ESR1 TRANSFAC yes 70937630
chr3 11950848 11950853 SP1 TRANSFAC yes 70937631
chr3 11950860 11950865 SP1 TRANSFAC yes 70937632
chr3 11950871 11950882 USF1 JASPAR yes 70937633
chr3 11950872 11950882 TFE3 JASPAR yes 70937634
chr3 11950872 11950882 TFEB JASPAR yes 70937635
chr3 11950872 11950882 TFEC JASPAR yes 70937636
chr3 11950872 11950883 USF2 JASPAR yes 70937637
chr3 11950873 11950883 MAX JASPAR yes 70937638
chr3 11950894 11950915 IRF1 JASPAR yes 70937639
chr3 11950896 11950911 IRF9 JASPAR yes 70937640
chr3 11950898 11950913 STAT2 JASPAR yes 70937641
chr3 11950899 11950911 IRF1 JASPAR yes 70937642
chr3 11950904 11950925 IRF1 JASPAR yes 70937643
chr3 11950906 11950921 IRF9 JASPAR yes 70937644
chr3 11950907 11950912 ETS2 TRANSFAC yes 70937645
chr3 11950908 11950922 STAT1 JASPAR yes 70937646
chr3 11950908 11950923 STAT2 JASPAR yes 70937647
chr3 11950909 11950921 IRF1 JASPAR yes 70937648
chr3 11950929 11950944 ESR2 JASPAR yes 70937649
chr3 11950933 11950951 ESR1 JASPAR yes 70937650
chr3 11950940 11950950 SP1 JASPAR yes 70937651
chr3 11950940 11950960 RREB1 JASPAR yes 70937652
chr3 11950941 11950951 SP1 JASPAR yes 70937653
chr3 11950951 11950966 HNF1A JASPAR yes 70937654
chr3 11950952 11950965 HNF1B JASPAR yes 70937655
chr3 11950958 11950962 YY1 TRANSFAC yes 70937656
SNP sites on vista39966[chr3:11950645-11950991]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 11950654 rs72494908 C T
GLI2
6552335
chr3 11950663 rs149046217 G T
BHLHE40 CREB3L1 HES5 HES7 HEY1 HEY2 HIC2 MAX MLX MNT MYC TFE3 TFEB USF1 USF2
6552336
chr3 11950677 rs143102501 T C no 6552337
chr3 11950682 rs62246116 C T no 6552338
chr3 11950686 rs62246117 T C no 6552339
chr3 11950736 rs13314820 C T
YY1
6552340
chr3 11950778 rs187795976 C T
ETS1
6552341
chr3 11950779 rs111668452 G A
ETS1
6552342
chr3 11950784 rs28429146 G A no 6552343
chr3 11950810 rs13064371 A G
ESR1
6552344
chr3 11950831 rs113656907 G A,C no 6552345
chr3 11950837 rs115366002 C A no 6552346
chr3 11950850 rs76555564 C A
SP1
6552347
chr3 11950851 rs116006076 G A
SP1
6552348
chr3 11950878 rs79487241 G A
MAX TFE3 TFEB TFEC USF1 USF2
6552349
chr3 11950881 rs79525349 G A
MAX TFE3 TFEB TFEC USF1 USF2
6552350
chr3 11950883 rs13087071 T C
MAX USF2
6552351
chr3 11950887 rs74430499 G T no 6552352
chr3 11950889 rs13087073 T A no 6552353
chr3 11950904 rs190757191 C T
IRF1 IRF9 STAT2
6552354
chr3 11950921 rs13064676 C A,G
IRF1 IRF9 STAT1 STAT2
6552355
chr3 11950935 rs76376298 G A
ESR1 ESR2
6552356
Genes possibly regulated by vista39966[chr3:11950645-11950991]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 11831916 11888393 - TAMM41 ENSG00000144559.6 11888393 0.7 0.99 3413 37748
Expression level of Genes
Back to top
miRNAs possibly regulated by vista39966[chr3:11950645-11950991]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results