EnhancerDB
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  3. vista39972[chr3:12163583-12163954]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39972[chr3:12163583-12163954]
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Tissue distribution of vista39972
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Transcription factor that possibly regulate vista39972[chr3:12163583-12163954]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 12163583 12163588 GATA1 TRANSFAC yes 460206
chr3 12163583 12163588 GATA1 TRANSFAC yes 70937784
chr3 12163584 12163600 RFX2 JASPAR yes 460207
chr3 12163584 12163600 RFX3 JASPAR yes 460208
chr3 12163584 12163600 RFX4 JASPAR yes 460209
chr3 12163584 12163600 RFX2 JASPAR yes 70937785
chr3 12163584 12163600 RFX3 JASPAR yes 70937786
chr3 12163584 12163600 RFX4 JASPAR yes 70937787
chr3 12163585 12163604 RFX2 JASPAR yes 460210
chr3 12163585 12163604 RFX2 JASPAR yes 70937788
chr3 12163587 12163602 RFX5 JASPAR yes 460211
chr3 12163587 12163602 RFX5 JASPAR yes 70937789
chr3 12163615 12163628 ZBTB18 JASPAR yes 460212
chr3 12163615 12163628 ZBTB18 JASPAR yes 70937790
chr3 12163640 12163654 POU1F1 JASPAR yes 460213
chr3 12163640 12163654 POU1F1 JASPAR yes 70937791
chr3 12163641 12163653 POU3F1 JASPAR yes 460214
chr3 12163641 12163653 POU3F2 JASPAR yes 460215
chr3 12163641 12163653 POU3F1 JASPAR yes 70937792
chr3 12163641 12163653 POU3F2 JASPAR yes 70937793
chr3 12163641 12163654 POU3F3 JASPAR yes 460216
chr3 12163641 12163654 POU3F3 JASPAR yes 70937794
chr3 12163642 12163654 POU2F1 JASPAR yes 460217
chr3 12163642 12163654 POU2F1 JASPAR yes 70937795
chr3 12163643 12163652 POU3F4 JASPAR yes 460218
chr3 12163643 12163652 POU5F1B JASPAR yes 460219
chr3 12163643 12163652 POU3F4 JASPAR yes 70937796
chr3 12163643 12163652 POU5F1B JASPAR yes 70937797
chr3 12163645 12163659 POU4F1 JASPAR yes 460220
chr3 12163645 12163659 POU4F1 JASPAR yes 70937798
chr3 12163645 12163661 POU4F2 JASPAR yes 460221
chr3 12163645 12163661 POU4F2 JASPAR yes 70937799
chr3 12163648 12163662 POU4F1 JASPAR yes 460222
chr3 12163648 12163662 POU4F1 JASPAR yes 70937800
chr3 12163650 12163654 TEAD2 TRANSFAC yes 460223
chr3 12163650 12163654 TEAD2 TRANSFAC yes 70937801
chr3 12163650 12163655 TBP TRANSFAC yes 460224
chr3 12163650 12163655 TBP TRANSFAC yes 70937802
chr3 12163650 12163656 TFIID TRANSFAC yes 460225
chr3 12163650 12163656 TFIID TRANSFAC yes 70937803
chr3 12163653 12163666 DUXA JASPAR yes 460226
chr3 12163653 12163666 DUXA JASPAR yes 70937804
chr3 12163654 12163665 DUX4 JASPAR yes 460227
chr3 12163654 12163665 PHOX2A JASPAR yes 460228
chr3 12163654 12163665 PROP1 JASPAR yes 460229
chr3 12163654 12163665 DUX4 JASPAR yes 70937805
chr3 12163654 12163665 PHOX2A JASPAR yes 70937806
chr3 12163654 12163665 PROP1 JASPAR yes 70937807
chr3 12163676 12163690 FOXF2 JASPAR yes 460230
chr3 12163676 12163690 FOXF2 JASPAR yes 70937808
chr3 12163677 12163688 FOXH1 JASPAR yes 460231
chr3 12163677 12163688 FOXH1 JASPAR yes 70937809
chr3 12163681 12163689 FOXG1 JASPAR yes 460232
chr3 12163681 12163689 FOXG1 JASPAR yes 70937810
chr3 12163684 12163702 MAFF JASPAR yes 460233
chr3 12163684 12163702 MAFF JASPAR yes 70937811
chr3 12163686 12163690 YY1 TRANSFAC yes 460234
chr3 12163686 12163690 YY1 TRANSFAC yes 70937812
chr3 12163686 12163701 MAFK JASPAR yes 460235
chr3 12163686 12163701 MAFK JASPAR yes 70937813
chr3 12163700 12163718 RARA JASPAR yes 460236
chr3 12163700 12163718 RARA JASPAR yes 70937814
chr3 12163704 12163719 LEF1 JASPAR yes 460237
chr3 12163704 12163719 LEF1 JASPAR yes 70937815
chr3 12163705 12163719 TCF7L2 JASPAR yes 460238
chr3 12163705 12163719 TCF7L2 JASPAR yes 70937816
chr3 12163743 12163758 SOX21 JASPAR yes 460239
chr3 12163743 12163758 SOX21 JASPAR yes 70937817
chr3 12163743 12163759 SOX8 JASPAR yes 460240
chr3 12163743 12163759 SOX8 JASPAR yes 70937818
chr3 12163745 12163760 PRDM1 JASPAR yes 460241
chr3 12163745 12163760 PRDM1 JASPAR yes 70937819
chr3 12163748 12163763 FOXP1 JASPAR yes 460242
chr3 12163748 12163763 FOXP1 JASPAR yes 70937820
chr3 12163749 12163764 STAT2 JASPAR yes 460243
chr3 12163749 12163764 STAT2 JASPAR yes 70937821
chr3 12163756 12163771 STAT1 JASPAR yes 460244
chr3 12163756 12163771 STAT1 JASPAR yes 70937822
chr3 12163758 12163769 STAT1 JASPAR yes 460245
chr3 12163758 12163769 STAT3 JASPAR yes 460246
chr3 12163758 12163769 STAT1 JASPAR yes 70937823
chr3 12163758 12163769 STAT3 JASPAR yes 70937824
chr3 12163759 12163772 ELF3 JASPAR yes 460247
chr3 12163759 12163772 ELF3 JASPAR yes 70937825
chr3 12163774 12163788 NR2F1 JASPAR yes 460248
chr3 12163774 12163788 NR2F1 JASPAR yes 70937826
chr3 12163805 12163817 MEF2D JASPAR yes 460249
chr3 12163805 12163817 MEF2D JASPAR yes 70937827
chr3 12163813 12163816 MYB TRANSFAC yes 460250
chr3 12163813 12163816 MYB TRANSFAC yes 70937828
chr3 12163826 12163837 FOXH1 JASPAR yes 460251
chr3 12163826 12163837 FOXH1 JASPAR yes 70937829
chr3 12163837 12163850 HSF1 JASPAR yes 460252
chr3 12163837 12163850 HSF1 JASPAR yes 70937830
chr3 12163840 12163851 STAT3 JASPAR yes 460253
chr3 12163840 12163851 STAT3 JASPAR yes 70937831
chr3 12163864 12163879 MEF2C JASPAR yes 460254
chr3 12163864 12163879 MEF2C JASPAR yes 70937832
chr3 12163864 12163885 IRF1 JASPAR yes 460255
chr3 12163864 12163885 IRF1 JASPAR yes 70937833
chr3 12163865 12163880 MEF2A JASPAR yes 460256
chr3 12163865 12163880 MEF2A JASPAR yes 70937834
chr3 12163866 12163878 MEF2D JASPAR yes 460257
chr3 12163866 12163878 MEF2D JASPAR yes 70937835
chr3 12163867 12163881 IRF7 JASPAR yes 460258
chr3 12163867 12163881 IRF7 JASPAR yes 70937836
chr3 12163868 12163883 PRDM1 JASPAR yes 460259
chr3 12163868 12163883 STAT2 JASPAR yes 460260
chr3 12163868 12163883 PRDM1 JASPAR yes 70937837
chr3 12163868 12163883 STAT2 JASPAR yes 70937838
chr3 12163868 12163886 IRF2 JASPAR yes 460261
chr3 12163868 12163886 IRF2 JASPAR yes 70937839
chr3 12163869 12163881 IRF1 JASPAR yes 460262
chr3 12163869 12163881 IRF1 JASPAR yes 70937840
chr3 12163898 12163902 TEAD2 TRANSFAC yes 460263
chr3 12163898 12163902 TEAD2 TRANSFAC yes 70937841
chr3 12163919 12163930 EBF1 JASPAR yes 460264
chr3 12163919 12163930 EBF1 JASPAR yes 70937842
chr3 12163920 12163931 EBF1 JASPAR yes 460265
chr3 12163920 12163931 EBF1 JASPAR yes 70937843
chr3 12163927 12163932 GATA2 JASPAR yes 460266
chr3 12163927 12163932 GATA2 JASPAR yes 70937844
chr3 12163933 12163937 NFE TRANSFAC yes 460267
chr3 12163933 12163937 NFE TRANSFAC yes 70937845
chr3 12163942 12163945 MYB TRANSFAC yes 460268
chr3 12163942 12163945 MYB TRANSFAC yes 70937846
chr3 12163953 12163959 LEF1 TRANSFAC yes 460269
chr3 12163953 12163959 TCF4 TRANSFAC yes 460270
chr3 12163953 12163959 LEF1 TRANSFAC yes 70937847
chr3 12163953 12163959 TCF4 TRANSFAC yes 70937848
SNP sites on vista39972[chr3:12163583-12163954]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 12163840 rs376373169 A C
HSF1 STAT3
6552732
Genes possibly regulated by vista39972[chr3:12163583-12163954]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 12194551 12200851 - TIMP4 ENSG00000157150.4 12200851 0.96 0.95 3414 63103
Expression level of Genes
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miRNAs possibly regulated by vista39972[chr3:12163583-12163954]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results