EnhancerDB
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  3. vista39974[chr3:12219674-12219854]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39974[chr3:12219674-12219854]
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Tissue distribution of vista39974
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Transcription factor that possibly regulate vista39974[chr3:12219674-12219854]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 12219670 12219685 RUNX2 JASPAR yes 461961
chr3 12219670 12219685 RUNX2 JASPAR yes 70937910
chr3 12219697 12219704 E2F1 TRANSFAC yes 461962
chr3 12219697 12219704 E2F1 TRANSFAC yes 70937911
chr3 12219711 12219726 TFAP2C JASPAR yes 461963
chr3 12219711 12219726 TFAP2C JASPAR yes 70937912
chr3 12219712 12219724 INSM1 JASPAR yes 461964
chr3 12219712 12219724 INSM1 JASPAR yes 70937913
chr3 12219717 12219722 SP1 TRANSFAC yes 461965
chr3 12219717 12219722 SP1 TRANSFAC yes 70937914
chr3 12219741 12219745 H1TF2 TRANSFAC yes 461966
chr3 12219741 12219745 NFE TRANSFAC yes 461967
chr3 12219741 12219745 SRF TRANSFAC yes 461968
chr3 12219741 12219745 H1TF2 TRANSFAC yes 70937915
chr3 12219741 12219745 NFE TRANSFAC yes 70937916
chr3 12219741 12219745 SRF TRANSFAC yes 70937917
chr3 12219742 12219753 FLI1 JASPAR yes 461969
chr3 12219742 12219753 FLI1 JASPAR yes 70937918
chr3 12219743 12219753 ERF JASPAR yes 461970
chr3 12219743 12219753 ERG JASPAR yes 461971
chr3 12219743 12219753 ETS1 JASPAR yes 461972
chr3 12219743 12219753 FLI1 JASPAR yes 461973
chr3 12219743 12219753 ERF JASPAR yes 70937919
chr3 12219743 12219753 ERG JASPAR yes 70937920
chr3 12219743 12219753 ETS1 JASPAR yes 70937921
chr3 12219743 12219753 FLI1 JASPAR yes 70937922
chr3 12219743 12219754 ETV2 JASPAR yes 461974
chr3 12219743 12219754 ETV2 JASPAR yes 70937923
chr3 12219743 12219756 ELF1 JASPAR yes 461975
chr3 12219743 12219756 ELF1 JASPAR yes 70937924
chr3 12219744 12219752 FEV JASPAR yes 461976
chr3 12219744 12219752 FEV JASPAR yes 70937925
chr3 12219749 12219753 NFE TRANSFAC yes 461977
chr3 12219749 12219753 NFE TRANSFAC yes 70937926
chr3 12219755 12219773 MAFF JASPAR yes 461978
chr3 12219755 12219773 MAFF JASPAR yes 70937927
chr3 12219757 12219768 NRL JASPAR yes 461979
chr3 12219757 12219768 NRL JASPAR yes 70937928
chr3 12219757 12219772 MAFK JASPAR yes 461980
chr3 12219757 12219772 MAFK JASPAR yes 70937929
chr3 12219757 12219778 MAFG JASPAR yes 461981
chr3 12219757 12219778 MAFG JASPAR yes 70937930
chr3 12219778 12219786 EHF JASPAR yes 461982
chr3 12219778 12219786 EHF JASPAR yes 70937931
chr3 12219794 12219798 LFA1 TRANSFAC yes 461983
chr3 12219794 12219798 LFA1 TRANSFAC yes 70937932
chr3 12219794 12219806 NHLH1 JASPAR yes 461984
chr3 12219794 12219806 NHLH1 JASPAR yes 70937933
chr3 12219795 12219805 MSC JASPAR yes 461985
chr3 12219795 12219805 NHLH1 JASPAR yes 461986
chr3 12219795 12219805 MSC JASPAR yes 70937934
chr3 12219795 12219805 NHLH1 JASPAR yes 70937935
chr3 12219795 12219807 TAL1 JASPAR yes 461987
chr3 12219795 12219807 TAL1 JASPAR yes 70937936
chr3 12219801 12219815 TLX1 JASPAR yes 461988
chr3 12219801 12219815 TLX1 JASPAR yes 70937937
chr3 12219825 12219836 BATF JASPAR yes 461989
chr3 12219825 12219836 BATF JASPAR yes 70937938
chr3 12219827 12219838 FOSL1 JASPAR yes 461990
chr3 12219827 12219838 FOSL1 JASPAR yes 70937939
chr3 12219828 12219839 JUNB JASPAR yes 461991
chr3 12219828 12219839 JUNB JASPAR yes 70937940
chr3 12219828 12219842 JUN JASPAR yes 461992
chr3 12219828 12219842 JUN JASPAR yes 70937941
chr3 12219846 12219851 ETS2 TRANSFAC yes 461993
chr3 12219846 12219851 ETS2 TRANSFAC yes 70937942
chr3 12219848 12219856 EHF JASPAR yes 461994
chr3 12219848 12219856 EHF JASPAR yes 70937943
chr3 12219854 12219875 REST JASPAR yes 461995
chr3 12219854 12219875 REST JASPAR yes 70937944
SNP sites on vista39974[chr3:12219674-12219854]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 12219797 rs6768462 G T
LFA1 MSC NHLH1 TAL1
6552881
Genes possibly regulated by vista39974[chr3:12219674-12219854]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 12194551 12200851 - TIMP4 ENSG00000157150.4 12200851 0.96 0.95 3414 81177
Expression level of Genes
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miRNAs possibly regulated by vista39974[chr3:12219674-12219854]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results