EnhancerDB
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  3. vista39978[chr3:12234951-12235397]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39978[chr3:12234951-12235397]
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Tissue distribution of vista39978
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Transcription factor that possibly regulate vista39978[chr3:12234951-12235397]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 12234917 12235373 JUND UCSC Txn Factor no Conserved 108528217
chr3 12234931 12235308 STAT3 UCSC Txn Factor no Conserved 108528218
chr3 12234947 12235302 RUNX3 UCSC Txn Factor no Conserved 108528219
chr3 12234951 12235326 NFIC UCSC Txn Factor no Conserved 108528220
chr3 12234955 12235299 FOSL2 UCSC Txn Factor no Conserved 108528221
chr3 12234985 12235305 MAFK UCSC Txn Factor no Conserved 108528222
chr3 12234988 12235284 ATF2 UCSC Txn Factor no Conserved 108528223
chr3 12234996 12235318 FOS UCSC Txn Factor no Conserved 108528224
chr3 12235014 12235256 MEF2A UCSC Txn Factor no Conserved 108528225
chr3 12234940 12234955 PRDM1 JASPAR yes 462817
chr3 12234940 12234955 PRDM1 JASPAR yes 70938057
chr3 12234946 12234967 ZNF263 JASPAR yes 462818
chr3 12234946 12234967 ZNF263 JASPAR yes 70938058
chr3 12234957 12234970 NR2F1 JASPAR yes 462819
chr3 12234957 12234970 NR2F1 JASPAR yes 70938059
chr3 12234959 12234974 TFAP2C JASPAR yes 462820
chr3 12234959 12234974 TFAP2C JASPAR yes 70938060
chr3 12234961 12234975 EBF1 JASPAR yes 462821
chr3 12234961 12234975 EBF1 JASPAR yes 70938061
chr3 12234968 12234989 ZNF263 JASPAR yes 462822
chr3 12234968 12234989 ZNF263 JASPAR yes 70938062
chr3 12234972 12234993 ZNF263 JASPAR yes 462823
chr3 12234972 12234993 ZNF263 JASPAR yes 70938063
chr3 12234995 12235007 PKNOX1 JASPAR yes 462824
chr3 12234995 12235007 PKNOX2 JASPAR yes 462825
chr3 12234995 12235007 TGIF1 JASPAR yes 462826
chr3 12234995 12235007 TGIF2 JASPAR yes 462827
chr3 12234995 12235007 PKNOX1 JASPAR yes 70938064
chr3 12234995 12235007 PKNOX2 JASPAR yes 70938065
chr3 12234995 12235007 TGIF1 JASPAR yes 70938066
chr3 12234995 12235007 TGIF2 JASPAR yes 70938067
chr3 12235010 12235023 NR2F1 JASPAR yes 462828
chr3 12235010 12235023 NR2F1 JASPAR yes 70938068
chr3 12235033 12235044 FOS JASPAR yes 462829
chr3 12235033 12235044 FOS JASPAR yes 70938069
chr3 12235035 12235041 JUN TRANSFAC yes 462830
chr3 12235035 12235041 JUN TRANSFAC yes 70938070
chr3 12235039 12235042 MYB TRANSFAC yes 462831
chr3 12235039 12235042 MYB TRANSFAC yes 70938071
chr3 12235071 12235075 TEAD2 TRANSFAC yes 462832
chr3 12235071 12235075 TEAD2 TRANSFAC yes 70938072
chr3 12235086 12235092 TBP TRANSFAC yes 462833
chr3 12235086 12235092 TBP TRANSFAC yes 70938073
chr3 12235091 12235102 FOS JASPAR yes 462834
chr3 12235091 12235102 JUND JASPAR yes 462835
chr3 12235091 12235102 FOS JASPAR yes 70938074
chr3 12235091 12235102 JUND JASPAR yes 70938075
chr3 12235092 12235101 JDP2 JASPAR yes 462836
chr3 12235092 12235101 JDP2 JASPAR yes 70938076
chr3 12235092 12235103 FOSL2 JASPAR yes 462837
chr3 12235092 12235103 JUNB JASPAR yes 462838
chr3 12235092 12235103 FOSL2 JASPAR yes 70938077
chr3 12235092 12235103 JUNB JASPAR yes 70938078
chr3 12235092 12235106 JUN JASPAR yes 462839
chr3 12235092 12235106 JUN JASPAR yes 70938079
chr3 12235093 12235104 BATF JASPAR yes 462840
chr3 12235093 12235104 BATF JASPAR yes 70938080
chr3 12235102 12235115 ZBTB18 JASPAR yes 462841
chr3 12235102 12235115 ZBTB18 JASPAR yes 70938081
chr3 12235107 12235122 JUND JASPAR yes 462842
chr3 12235107 12235122 JUND JASPAR yes 70938082
chr3 12235108 12235121 JUN JASPAR yes 462843
chr3 12235108 12235121 JUN JASPAR yes 70938083
chr3 12235110 12235122 JDP2 JASPAR yes 462844
chr3 12235110 12235122 JDP2 JASPAR yes 70938084
chr3 12235118 12235133 RUNX2 JASPAR yes 462845
chr3 12235118 12235133 RUNX2 JASPAR yes 70938085
chr3 12235125 12235140 RUNX2 JASPAR yes 462846
chr3 12235125 12235140 RUNX2 JASPAR yes 70938086
chr3 12235126 12235135 RUNX2 JASPAR yes 462847
chr3 12235126 12235135 RUNX2 JASPAR yes 70938087
chr3 12235126 12235136 RUNX3 JASPAR yes 462848
chr3 12235126 12235136 RUNX3 JASPAR yes 70938088
chr3 12235126 12235137 RUNX1 JASPAR yes 462849
chr3 12235126 12235137 RUNX1 JASPAR yes 70938089
chr3 12235126 12235141 SCRT1 JASPAR yes 462850
chr3 12235126 12235141 SCRT1 JASPAR yes 70938090
chr3 12235130 12235140 NKX2-3 JASPAR yes 462851
chr3 12235130 12235140 NKX2-3 JASPAR yes 70938091
chr3 12235141 12235145 YY1 TRANSFAC yes 462852
chr3 12235141 12235145 YY1 TRANSFAC yes 70938092
chr3 12235146 12235160 JUN JASPAR yes 462853
chr3 12235146 12235160 JUN JASPAR yes 70938093
chr3 12235148 12235159 BATF JASPAR yes 462854
chr3 12235148 12235159 BATF JASPAR yes 70938094
chr3 12235149 12235160 FOSL2 JASPAR yes 462855
chr3 12235149 12235160 JUNB JASPAR yes 462856
chr3 12235149 12235160 FOSL2 JASPAR yes 70938095
chr3 12235149 12235160 JUNB JASPAR yes 70938096
chr3 12235150 12235161 FOS JASPAR yes 462857
chr3 12235150 12235161 FOSL1 JASPAR yes 462858
chr3 12235150 12235161 JUND JASPAR yes 462859
chr3 12235150 12235161 NFE2 JASPAR yes 462860
chr3 12235150 12235161 FOS JASPAR yes 70938097
chr3 12235150 12235161 FOSL1 JASPAR yes 70938098
chr3 12235150 12235161 JUND JASPAR yes 70938099
chr3 12235150 12235161 NFE2 JASPAR yes 70938100
chr3 12235151 12235160 JDP2 JASPAR yes 462861
chr3 12235151 12235160 JDP2 JASPAR yes 70938101
chr3 12235151 12235162 FOSL2 JASPAR yes 462862
chr3 12235151 12235162 JUNB JASPAR yes 462863
chr3 12235151 12235162 NFE2L2 JASPAR yes 462864
chr3 12235151 12235162 FOSL2 JASPAR yes 70938102
chr3 12235151 12235162 JUNB JASPAR yes 70938103
chr3 12235151 12235162 NFE2L2 JASPAR yes 70938104
chr3 12235151 12235165 JUN JASPAR yes 462865
chr3 12235151 12235165 JUN JASPAR yes 70938105
chr3 12235152 12235159 JUN TRANSFAC yes 462866
chr3 12235152 12235159 JUN TRANSFAC yes 70938106
chr3 12235152 12235163 BATF JASPAR yes 462867
chr3 12235152 12235163 BATF JASPAR yes 70938107
chr3 12235192 12235196 YY1 TRANSFAC yes 462868
chr3 12235192 12235196 YY1 TRANSFAC yes 70938108
chr3 12235200 12235218 ESR2 JASPAR yes 462869
chr3 12235200 12235218 ESR2 JASPAR yes 70938109
chr3 12235202 12235217 ESR2 JASPAR yes 462870
chr3 12235202 12235217 ESR2 JASPAR yes 70938110
chr3 12235203 12235207 ESR1 TRANSFAC yes 462871
chr3 12235203 12235207 ESR1 TRANSFAC yes 70938111
chr3 12235208 12235229 REST JASPAR yes 462872
chr3 12235208 12235229 REST JASPAR yes 70938112
chr3 12235223 12235234 ESRRB JASPAR yes 462873
chr3 12235223 12235234 ESRRB JASPAR yes 70938113
chr3 12235227 12235239 BHLHE23 JASPAR yes 462874
chr3 12235227 12235239 BHLHE23 JASPAR yes 70938114
chr3 12235228 12235238 BHLHE22 JASPAR yes 462875
chr3 12235228 12235238 NEUROD2 JASPAR yes 462876
chr3 12235228 12235238 OLIG1 JASPAR yes 462877
chr3 12235228 12235238 OLIG2 JASPAR yes 462878
chr3 12235228 12235238 OLIG3 JASPAR yes 462879
chr3 12235228 12235238 BHLHE22 JASPAR yes 70938115
chr3 12235228 12235238 NEUROD2 JASPAR yes 70938116
chr3 12235228 12235238 OLIG1 JASPAR yes 70938117
chr3 12235228 12235238 OLIG2 JASPAR yes 70938118
chr3 12235228 12235238 OLIG3 JASPAR yes 70938119
chr3 12235243 12235260 ZNF410 JASPAR yes 462880
chr3 12235243 12235260 ZNF410 JASPAR yes 70938120
chr3 12235258 12235279 ZNF263 JASPAR yes 462881
chr3 12235258 12235279 ZNF263 JASPAR yes 70938121
chr3 12235259 12235279 RREB1 JASPAR yes 462882
chr3 12235259 12235279 RREB1 JASPAR yes 70938122
chr3 12235260 12235280 RREB1 JASPAR yes 462883
chr3 12235260 12235280 RREB1 JASPAR yes 70938123
chr3 12235261 12235266 SP1 TRANSFAC yes 462884
chr3 12235261 12235266 SP1 TRANSFAC yes 70938124
chr3 12235265 12235277 INSM1 JASPAR yes 462885
chr3 12235265 12235277 INSM1 JASPAR yes 70938125
chr3 12235270 12235280 SP1 JASPAR yes 462886
chr3 12235270 12235280 SP1 JASPAR yes 70938126
chr3 12235273 12235278 SP1 TRANSFAC yes 462887
chr3 12235273 12235278 SP1 TRANSFAC yes 70938127
chr3 12235275 12235280 TFAP2A TRANSFAC yes 462888
chr3 12235275 12235280 TFAP2A TRANSFAC yes 70938128
chr3 12235275 12235281 MZF1 JASPAR yes 462889
chr3 12235275 12235281 MZF1 JASPAR yes 70938129
chr3 12235276 12235287 NFKB1 JASPAR yes 462890
chr3 12235276 12235287 NFKB1 JASPAR yes 70938130
chr3 12235277 12235282 ETS2 TRANSFAC yes 462891
chr3 12235277 12235282 ETS2 TRANSFAC yes 70938131
chr3 12235277 12235287 NFKB1 JASPAR yes 462892
chr3 12235277 12235287 REL JASPAR yes 462893
chr3 12235277 12235287 NFKB1 JASPAR yes 70938132
chr3 12235277 12235287 REL JASPAR yes 70938133
chr3 12235277 12235288 NFKB1 JASPAR yes 462894
chr3 12235277 12235288 NFKB1 JASPAR yes 70938134
chr3 12235312 12235318 TBP TRANSFAC yes 462895
chr3 12235312 12235318 TBP TRANSFAC yes 70938135
chr3 12235322 12235333 EBF1 JASPAR yes 462896
chr3 12235322 12235333 EBF1 JASPAR yes 70938136
chr3 12235335 12235340 ETS2 TRANSFAC yes 462897
chr3 12235335 12235340 ETS2 TRANSFAC yes 70938137
chr3 12235352 12235364 PBX1 JASPAR yes 462898
chr3 12235352 12235364 PBX1 JASPAR yes 70938138
chr3 12235353 12235367 ONECUT3 JASPAR yes 462899
chr3 12235353 12235367 ONECUT3 JASPAR yes 70938139
chr3 12235358 12235374 POU4F3 JASPAR yes 462900
chr3 12235358 12235374 POU4F3 JASPAR yes 70938140
chr3 12235360 12235372 FOXI1 JASPAR yes 462901
chr3 12235360 12235372 FOXI1 JASPAR yes 70938141
chr3 12235381 12235392 HOXA10 JASPAR yes 462902
chr3 12235381 12235392 HOXA10 JASPAR yes 70938142
chr3 12235381 12235395 GATA2 JASPAR yes 462903
chr3 12235381 12235395 GATA2 JASPAR yes 70938143
SNP sites on vista39978[chr3:12234951-12235397]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 12234979 rs73125117 G A
FOSL2 JUND NFIC RUNX3 STAT3 ZNF263
6552989
chr3 12234999 rs73813150 C A
ATF2 FOS FOSL2 JUND MAFK NFIC PKNOX1 PKNOX2 RUNX3 STAT3 TGIF1 TGIF2
6552990
chr3 12235117 rs59924847 G T
ATF2 FOS FOSL2 JDP2 JUN JUND MAFK MEF2A NFIC RUNX3 STAT3
6552991
Genes possibly regulated by vista39978[chr3:12234951-12235397]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 12194551 12200851 - TIMP4 ENSG00000157150.4 12200851 0.96 0.95 3414 65900
chr3 12328867 12475855 + PPARG ENSG00000132170.15 12328867 0.9 1.0 3415 6530
Expression level of Genes
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miRNAs possibly regulated by vista39978[chr3:12234951-12235397]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results