EnhancerDB
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  3. vista39983[chr3:12350153-12350305]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39983[chr3:12350153-12350305]
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Tissue distribution of vista39983
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Transcription factor that possibly regulate vista39983[chr3:12350153-12350305]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 12349990 12350377 EP300 UCSC Txn Factor no Conserved 108528234
chr3 12349995 12350319 FOSL2 UCSC Txn Factor no Conserved 108528235
chr3 12350150 12350160 NFATC3 JASPAR yes 471556
chr3 12350150 12350160 NFATC3 JASPAR yes 70938452
chr3 12350158 12350174 SOX4 JASPAR yes 471557
chr3 12350158 12350174 SOX4 JASPAR yes 70938453
chr3 12350168 12350172 YY1 TRANSFAC yes 471558
chr3 12350168 12350172 YY1 TRANSFAC yes 70938454
chr3 12350195 12350200 SP1 TRANSFAC yes 471559
chr3 12350195 12350200 SP1 TRANSFAC yes 70938455
chr3 12350203 12350207 YY1 TRANSFAC yes 471560
chr3 12350203 12350207 YY1 TRANSFAC yes 70938456
chr3 12350207 12350222 RUNX2 JASPAR yes 471561
chr3 12350207 12350222 RUNX2 JASPAR yes 70938457
chr3 12350208 12350218 RUNX3 JASPAR yes 471562
chr3 12350208 12350218 RUNX3 JASPAR yes 70938458
chr3 12350218 12350228 NFIA JASPAR yes 471563
chr3 12350218 12350228 NFIA JASPAR yes 70938459
chr3 12350220 12350226 NFIC JASPAR yes 471564
chr3 12350220 12350226 NFIC JASPAR yes 70938460
chr3 12350226 12350241 NFYB JASPAR yes 471565
chr3 12350226 12350241 NFYB JASPAR yes 70938461
chr3 12350228 12350244 NFYA JASPAR yes 471566
chr3 12350228 12350244 NFYA JASPAR yes 70938462
chr3 12350229 12350247 NFYA JASPAR yes 471567
chr3 12350229 12350247 NFYA JASPAR yes 70938463
chr3 12350233 12350237 H1TF2 TRANSFAC yes 471568
chr3 12350233 12350237 NFE TRANSFAC yes 471569
chr3 12350233 12350237 SRF TRANSFAC yes 471570
chr3 12350233 12350237 H1TF2 TRANSFAC yes 70938464
chr3 12350233 12350237 NFE TRANSFAC yes 70938465
chr3 12350233 12350237 SRF TRANSFAC yes 70938466
chr3 12350240 12350244 LFA1 TRANSFAC yes 471571
chr3 12350240 12350244 LFA1 TRANSFAC yes 70938467
chr3 12350243 12350247 YY1 TRANSFAC yes 471572
chr3 12350243 12350247 YY1 TRANSFAC yes 70938468
chr3 12350253 12350259 TCF4 TRANSFAC yes 471573
chr3 12350253 12350259 TCF4 TRANSFAC yes 70938469
chr3 12350264 12350280 POU4F2 JASPAR yes 471574
chr3 12350264 12350280 POU4F3 JASPAR yes 471575
chr3 12350264 12350280 POU4F2 JASPAR yes 70938470
chr3 12350264 12350280 POU4F3 JASPAR yes 70938471
chr3 12350266 12350280 POU4F1 JASPAR yes 471576
chr3 12350266 12350280 POU4F1 JASPAR yes 70938472
chr3 12350266 12350281 HNF1A JASPAR yes 471577
chr3 12350266 12350281 HNF1A JASPAR yes 70938473
chr3 12350267 12350279 HNF1B JASPAR yes 471578
chr3 12350267 12350279 HNF1B JASPAR yes 70938474
chr3 12350267 12350280 HNF1B JASPAR yes 471579
chr3 12350267 12350280 HNF1B JASPAR yes 70938475
chr3 12350271 12350285 FOXF2 JASPAR yes 471580
chr3 12350271 12350285 FOXF2 JASPAR yes 70938476
chr3 12350273 12350277 YY1 TRANSFAC yes 471581
chr3 12350273 12350277 YY1 TRANSFAC yes 70938477
chr3 12350276 12350287 GCM1 JASPAR yes 471582
chr3 12350276 12350287 GCM1 JASPAR yes 70938478
chr3 12350276 12350292 ZNF143 JASPAR yes 471583
chr3 12350276 12350292 ZNF143 JASPAR yes 70938479
chr3 12350277 12350287 GCM2 JASPAR yes 471584
chr3 12350277 12350287 GCM2 JASPAR yes 70938480
chr3 12350303 12350308 MYB TRANSFAC yes 471585
chr3 12350303 12350308 MYB TRANSFAC yes 70938481
SNP sites on vista39983[chr3:12350153-12350305]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 12350164 rs374989692 T G
EP300 FOSL2 SOX4
6553765
chr3 12350202 rs7638788 A G
EP300 FOSL2
6553766
Genes possibly regulated by vista39983[chr3:12350153-12350305]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 12328867 12475855 + PPARG ENSG00000132170.15 12328867 0.9 1.0 3415 78714
Expression level of Genes
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miRNAs possibly regulated by vista39983[chr3:12350153-12350305]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results