EnhancerDB
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  3. vista39984[chr3:12369841-12370512]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39984[chr3:12369841-12370512]
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Tissue distribution of vista39984
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Transcription factor that possibly regulate vista39984[chr3:12369841-12370512]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 12369838 12369849 STAT3 JASPAR yes 474356
chr3 12369838 12369849 STAT3 JASPAR yes 70938482
chr3 12369847 12369857 MSC JASPAR yes 474357
chr3 12369847 12369857 MSC JASPAR yes 70938483
chr3 12369860 12369869 THAP1 JASPAR yes 474358
chr3 12369860 12369869 THAP1 JASPAR yes 70938484
chr3 12369872 12369890 SRF JASPAR yes 474359
chr3 12369872 12369890 SRF JASPAR yes 70938485
chr3 12369878 12369882 YY1 TRANSFAC yes 474360
chr3 12369878 12369882 YY1 TRANSFAC yes 70938486
chr3 12369884 12369890 YY1 JASPAR yes 474361
chr3 12369884 12369890 YY1 JASPAR yes 70938487
chr3 12369884 12369903 RFX2 JASPAR yes 474362
chr3 12369884 12369903 RFX2 JASPAR yes 70938488
chr3 12369891 12369905 CREB3 JASPAR yes 474363
chr3 12369891 12369905 CREB3 JASPAR yes 70938489
chr3 12369896 12369901 ATF1 TRANSFAC yes 474364
chr3 12369896 12369901 ATF1 TRANSFAC yes 70938490
chr3 12369902 12369906 YY1 TRANSFAC yes 474365
chr3 12369902 12369906 YY1 TRANSFAC yes 70938491
chr3 12369913 12369927 PLAG1 JASPAR yes 474366
chr3 12369913 12369927 PLAG1 JASPAR yes 70938492
chr3 12369926 12369930 YY1 TRANSFAC yes 474367
chr3 12369926 12369930 YY1 TRANSFAC yes 70938493
chr3 12369962 12369975 SMAD2 JASPAR yes 474368
chr3 12369962 12369975 SMAD2 JASPAR yes 70938494
chr3 12369976 12369996 ESR1 JASPAR yes 474369
chr3 12369976 12369996 ESR1 JASPAR yes 70938495
chr3 12369988 12369999 E2F6 JASPAR yes 474370
chr3 12369988 12369999 E2F6 JASPAR yes 70938496
chr3 12370010 12370029 REST JASPAR yes 474371
chr3 12370010 12370029 REST JASPAR yes 70938497
chr3 12370013 12370027 EBF1 JASPAR yes 474372
chr3 12370013 12370027 EBF1 JASPAR yes 70938498
chr3 12370015 12370026 EBF1 JASPAR yes 474373
chr3 12370015 12370026 EBF1 JASPAR yes 70938499
chr3 12370022 12370029 SPIB JASPAR yes 474374
chr3 12370022 12370029 SPIB JASPAR yes 70938500
chr3 12370041 12370045 LFA1 TRANSFAC yes 474375
chr3 12370041 12370045 LFA1 TRANSFAC yes 70938501
chr3 12370046 12370052 GATA3 JASPAR yes 474376
chr3 12370046 12370052 GATA3 JASPAR yes 70938502
chr3 12370088 12370106 NFYA JASPAR yes 474377
chr3 12370088 12370106 NFYA JASPAR yes 70938503
chr3 12370090 12370101 CDX2 JASPAR yes 474378
chr3 12370090 12370101 CDX2 JASPAR yes 70938504
chr3 12370091 12370102 HOXA10 JASPAR yes 474379
chr3 12370091 12370102 HOXA10 JASPAR yes 70938505
chr3 12370092 12370096 H1TF2 TRANSFAC yes 474380
chr3 12370092 12370096 NFE TRANSFAC yes 474381
chr3 12370092 12370096 SRF TRANSFAC yes 474382
chr3 12370092 12370096 H1TF2 TRANSFAC yes 70938506
chr3 12370092 12370096 NFE TRANSFAC yes 70938507
chr3 12370092 12370096 SRF TRANSFAC yes 70938508
chr3 12370092 12370101 CDX1 JASPAR yes 474383
chr3 12370092 12370101 CDX1 JASPAR yes 70938509
chr3 12370092 12370102 HOXA13 JASPAR yes 474384
chr3 12370092 12370102 HOXB13 JASPAR yes 474385
chr3 12370092 12370102 HOXD13 JASPAR yes 474386
chr3 12370092 12370102 HOXA13 JASPAR yes 70938510
chr3 12370092 12370102 HOXB13 JASPAR yes 70938511
chr3 12370092 12370102 HOXD13 JASPAR yes 70938512
chr3 12370101 12370111 NEUROG2 JASPAR yes 474387
chr3 12370101 12370111 NEUROG2 JASPAR yes 70938513
chr3 12370106 12370110 NFE TRANSFAC yes 474388
chr3 12370106 12370110 NFE TRANSFAC yes 70938514
chr3 12370108 12370127 PAX5 JASPAR yes 474389
chr3 12370108 12370127 PAX5 JASPAR yes 70938515
chr3 12370135 12370156 ZNF263 JASPAR yes 474390
chr3 12370135 12370156 ZNF263 JASPAR yes 70938516
chr3 12370157 12370175 ESR1 JASPAR yes 70938517
chr3 12370160 12370166 YY1 JASPAR yes 70938518
chr3 12370165 12370186 ZNF263 JASPAR yes 70938519
chr3 12370168 12370189 ZNF263 JASPAR yes 70938520
chr3 12370200 12370208 EHF JASPAR yes 70938521
chr3 12370202 12370207 ETS2 TRANSFAC yes 70938522
chr3 12370212 12370222 SP1 JASPAR yes 70938523
chr3 12370230 12370251 ZNF263 JASPAR yes 70938524
chr3 12370233 12370254 IRF1 JASPAR yes 70938525
chr3 12370234 12370255 ZNF263 JASPAR yes 70938526
chr3 12370241 12370252 FLI1 JASPAR yes 70938527
chr3 12370242 12370252 GABPA JASPAR yes 70938528
chr3 12370242 12370255 ELF1 JASPAR yes 70938529
chr3 12370243 12370251 EHF JASPAR yes 70938530
chr3 12370250 12370255 GATA1 TRANSFAC yes 70938531
chr3 12370261 12370264 MYB TRANSFAC yes 70938532
chr3 12370295 12370309 SPI1 JASPAR yes 70938533
chr3 12370295 12370309 SPIC JASPAR yes 70938534
chr3 12370296 12370309 ELF1 JASPAR yes 70938535
chr3 12370299 12370306 SPIB JASPAR yes 70938536
chr3 12370321 12370331 TFAP4 JASPAR yes 70938537
chr3 12370348 12370365 BCL6B JASPAR yes 70938538
chr3 12370358 12370364 YY1 JASPAR yes 70938539
chr3 12370360 12370374 TLX1 JASPAR yes 70938540
chr3 12370374 12370388 STAT1 JASPAR yes 70938541
chr3 12370377 12370398 ZNF263 JASPAR yes 70938542
chr3 12370378 12370383 ETS2 TRANSFAC yes 70938543
chr3 12370378 12370393 PRDM1 JASPAR yes 70938544
chr3 12370378 12370399 ZNF263 JASPAR yes 70938545
chr3 12370400 12370410 TEAD1 JASPAR yes 70938546
chr3 12370400 12370410 TEAD4 JASPAR yes 70938547
chr3 12370401 12370409 TEAD3 JASPAR yes 70938548
chr3 12370408 12370419 ELF5 JASPAR yes 70938549
chr3 12370410 12370415 ETS2 TRANSFAC yes 70938550
chr3 12370410 12370418 FEV JASPAR yes 70938551
chr3 12370411 12370418 SPI1 JASPAR yes 70938552
chr3 12370420 12370435 MAFK JASPAR yes 70938553
chr3 12370441 12370460 CTCF JASPAR yes 70938554
chr3 12370443 12370447 NFE TRANSFAC yes 70938555
chr3 12370457 12370461 H1TF2 TRANSFAC yes 70938556
chr3 12370457 12370461 NFE TRANSFAC yes 70938557
chr3 12370457 12370461 SRF TRANSFAC yes 70938558
chr3 12370466 12370478 YY1 JASPAR yes 70938559
SNP sites on vista39984[chr3:12369841-12370512]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 12369863 rs189511593 G A
THAP1
6553966
chr3 12370083 rs880663 A G no 6553967
Genes possibly regulated by vista39984[chr3:12369841-12370512]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 12328867 12475855 + PPARG ENSG00000132170.15 12328867 0.9 1.0 3415 59026
Expression level of Genes
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miRNAs possibly regulated by vista39984[chr3:12369841-12370512]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results