EnhancerDB
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  3. vista39986[chr3:12395386-12395555]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39986[chr3:12395386-12395555]
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Tissue distribution of vista39986
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Transcription factor that possibly regulate vista39986[chr3:12395386-12395555]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 12395274 12395814 EP300 UCSC Txn Factor no Conserved 108528241
chr3 12395327 12395675 CEBPB UCSC Txn Factor no Conserved 108528242
chr3 12395399 12395412 SMAD2 JASPAR yes 475923
chr3 12395399 12395412 SMAD2 JASPAR yes 70938603
chr3 12395442 12395453 CEBPA JASPAR yes 475924
chr3 12395442 12395453 CEBPA JASPAR yes 70938604
chr3 12395460 12395473 JUN JASPAR yes 475925
chr3 12395460 12395473 JUN JASPAR yes 70938605
chr3 12395490 12395501 CEBPA JASPAR yes 475926
chr3 12395490 12395501 CEBPA JASPAR yes 70938606
chr3 12395491 12395499 CEBPA TRANSFAC yes 475927
chr3 12395491 12395499 CEBPA TRANSFAC yes 70938607
chr3 12395491 12395501 CEBPB JASPAR yes 475928
chr3 12395491 12395501 CEBPE JASPAR yes 475929
chr3 12395491 12395501 CEBPG JASPAR yes 475930
chr3 12395491 12395501 CEBPB JASPAR yes 70938608
chr3 12395491 12395501 CEBPE JASPAR yes 70938609
chr3 12395491 12395501 CEBPG JASPAR yes 70938610
chr3 12395491 12395502 CEBPB JASPAR yes 475931
chr3 12395491 12395502 CEBPB JASPAR yes 70938611
chr3 12395498 12395508 NFATC3 JASPAR yes 475932
chr3 12395498 12395508 NFATC3 JASPAR yes 70938612
chr3 12395498 12395509 FOXB1 JASPAR yes 475933
chr3 12395498 12395509 FOXB1 JASPAR yes 70938613
SNP sites on vista39986[chr3:12395386-12395555]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 12395554 rs549935498 C T
CEBPB EP300
6554108
Genes possibly regulated by vista39986[chr3:12395386-12395555]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 12328867 12475855 + PPARG ENSG00000132170.15 12328867 0.9 1.0 3415 33481
Expression level of Genes
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miRNAs possibly regulated by vista39986[chr3:12395386-12395555]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results