EnhancerDB
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  3. vista39987[chr3:12398616-12399008]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39987[chr3:12398616-12399008]
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Tissue distribution of vista39987
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Transcription factor that possibly regulate vista39987[chr3:12398616-12399008]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 12398636 12398640 ESR1 TRANSFAC yes 476392
chr3 12398636 12398640 ESR1 TRANSFAC yes 70938614
chr3 12398658 12398672 JUN JASPAR yes 476393
chr3 12398658 12398672 RORA JASPAR yes 476394
chr3 12398658 12398672 JUN JASPAR yes 70938615
chr3 12398658 12398672 RORA JASPAR yes 70938616
chr3 12398661 12398672 FOSL2 JASPAR yes 476395
chr3 12398661 12398672 JUNB JASPAR yes 476396
chr3 12398661 12398672 FOSL2 JASPAR yes 70938617
chr3 12398661 12398672 JUNB JASPAR yes 70938618
chr3 12398662 12398673 FOS JASPAR yes 476397
chr3 12398662 12398673 FOSL1 JASPAR yes 476398
chr3 12398662 12398673 JUND JASPAR yes 476399
chr3 12398662 12398673 FOS JASPAR yes 70938619
chr3 12398662 12398673 FOSL1 JASPAR yes 70938620
chr3 12398662 12398673 JUND JASPAR yes 70938621
chr3 12398663 12398677 JUN JASPAR yes 476400
chr3 12398663 12398677 JUN JASPAR yes 70938622
chr3 12398664 12398671 JUN TRANSFAC yes 476401
chr3 12398664 12398671 JUN TRANSFAC yes 70938623
chr3 12398664 12398675 BATF JASPAR yes 476402
chr3 12398664 12398675 BATF JASPAR yes 70938624
chr3 12398676 12398686 SREBF2 JASPAR yes 476403
chr3 12398676 12398686 SREBF2 JASPAR yes 70938625
chr3 12398700 12398714 SPI1 JASPAR yes 476404
chr3 12398700 12398714 SPI1 JASPAR yes 70938626
chr3 12398704 12398710 MZF1 JASPAR yes 476405
chr3 12398704 12398710 MZF1 JASPAR yes 70938627
chr3 12398706 12398721 PRDM1 JASPAR yes 476406
chr3 12398706 12398721 PRDM1 JASPAR yes 70938628
chr3 12398708 12398712 YY1 TRANSFAC yes 476407
chr3 12398708 12398712 YY1 TRANSFAC yes 70938629
chr3 12398715 12398726 DMRT3 JASPAR yes 476408
chr3 12398715 12398726 DMRT3 JASPAR yes 70938630
chr3 12398719 12398722 MYB TRANSFAC yes 476409
chr3 12398719 12398722 MYB TRANSFAC yes 70938631
chr3 12398731 12398744 SMAD2 JASPAR yes 476410
chr3 12398731 12398744 SMAD2 JASPAR yes 70938632
chr3 12398758 12398768 TFAP4 JASPAR yes 476411
chr3 12398758 12398768 TFAP4 JASPAR yes 70938633
chr3 12398760 12398773 NR2F1 JASPAR yes 476412
chr3 12398760 12398773 NR2F1 JASPAR yes 70938634
chr3 12398775 12398796 ZNF263 JASPAR yes 476413
chr3 12398775 12398796 ZNF263 JASPAR yes 70938635
chr3 12398779 12398794 PRDM1 JASPAR yes 476414
chr3 12398779 12398794 PRDM1 JASPAR yes 70938636
chr3 12398786 12398807 ZNF263 JASPAR yes 476415
chr3 12398786 12398807 ZNF263 JASPAR yes 70938637
chr3 12398829 12398834 ETS2 TRANSFAC yes 476416
chr3 12398829 12398834 ETS2 TRANSFAC yes 70938638
chr3 12398836 12398846 TEAD1 JASPAR yes 70938639
chr3 12398836 12398846 TEAD4 JASPAR yes 70938640
chr3 12398836 12398848 TEAD1 JASPAR yes 70938641
chr3 12398837 12398845 TEAD3 JASPAR yes 70938642
chr3 12398839 12398852 ZBTB18 JASPAR yes 70938643
chr3 12398863 12398873 ID4 JASPAR yes 70938644
chr3 12398863 12398873 TCF3 JASPAR yes 70938645
chr3 12398863 12398873 TCF4 JASPAR yes 70938646
chr3 12398864 12398873 SNAI2 JASPAR yes 70938647
chr3 12398865 12398870 USF2 TRANSFAC yes 70938648
chr3 12398868 12398874 NFE2 TRANSFAC yes 70938649
chr3 12398886 12398890 NFE TRANSFAC yes 70938650
chr3 12398898 12398908 GABPA JASPAR yes 70938651
chr3 12398901 12398908 SPIB JASPAR yes 70938652
chr3 12398903 12398918 HSF1 JASPAR yes 70938653
chr3 12398926 12398934 MEIS2 JASPAR yes 70938654
chr3 12398927 12398931 NFE TRANSFAC yes 70938655
chr3 12398927 12398934 MEIS1 JASPAR yes 70938656
chr3 12398939 12398943 TEAD2 TRANSFAC yes 70938657
chr3 12398963 12398983 PPARG JASPAR yes 70938658
chr3 12398964 12398982 ESR1 JASPAR yes 70938659
chr3 12398965 12398983 ESR2 JASPAR yes 70938660
chr3 12398966 12398981 ESR2 JASPAR yes 70938661
chr3 12398966 12398986 ESR1 JASPAR yes 70938662
chr3 12398967 12398987 ESR1 JASPAR yes 70938663
chr3 12398969 12398989 PPARG JASPAR yes 70938664
chr3 12398971 12398989 ESR2 JASPAR yes 70938665
chr3 12398972 12398987 ESR2 JASPAR yes 70938666
chr3 12398973 12398984 ESRRA JASPAR yes 70938667
chr3 12398973 12398984 ESRRB JASPAR yes 70938668
chr3 12398974 12398982 NR4A2 JASPAR yes 70938669
chr3 12398975 12398992 RARA JASPAR yes 70938670
chr3 12398979 12398986 E2F1 TRANSFAC yes 70938671
chr3 12398990 12398994 NFE TRANSFAC yes 70938672
chr3 12398991 12398996 GATA2 JASPAR yes 70938673
SNP sites on vista39987[chr3:12398616-12399008]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 12398636 rs6778740 C T
ESR1
6554142
chr3 12398708 rs116404274 C T
MZF1 PRDM1 SPI1 YY1
6554143
chr3 12398747 rs191582861 C G,T no 6554144
chr3 12398817 rs530857396 G A no 6554145
chr3 12398828 rs574089965 T C no 6554146
chr3 12398891 rs115041696 C T no 6554147
Genes possibly regulated by vista39987[chr3:12398616-12399008]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 12328867 12475855 + PPARG ENSG00000132170.15 12328867 0.9 1.0 3415 30251
Expression level of Genes
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miRNAs possibly regulated by vista39987[chr3:12398616-12399008]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results