EnhancerDB
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  3. vista39989[chr3:12512871-12513125]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39989[chr3:12512871-12513125]
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Tissue distribution of vista39989
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Transcription factor that possibly regulate vista39989[chr3:12512871-12513125]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 12512627 12513062 CTCF UCSC Txn Factor no Conserved 108528244
chr3 12512651 12513365 TCF7L2 UCSC Txn Factor no Conserved 108528245
chr3 12512699 12512990 RAD21 UCSC Txn Factor no Conserved 108528246
chr3 12512753 12513153 FOS UCSC Txn Factor no Conserved 108528247
chr3 12512797 12513141 STAT3 UCSC Txn Factor no Conserved 108528248
chr3 12512817 12513093 JUND UCSC Txn Factor no Conserved 108528249
chr3 12512847 12513081 FOSL2 UCSC Txn Factor no Conserved 108528250
chr3 12512872 12512880 FOXO3 JASPAR yes 485231
chr3 12512872 12512880 FOXO3 JASPAR yes 70938716
chr3 12512876 12512882 TCF1 TRANSFAC yes 485232
chr3 12512876 12512882 TCF1 TRANSFAC yes 70938717
chr3 12512898 12512903 GATA2 JASPAR yes 485233
chr3 12512898 12512903 GATA2 JASPAR yes 70938718
chr3 12512903 12512907 YY1 TRANSFAC yes 485234
chr3 12512903 12512907 YY1 TRANSFAC yes 70938719
chr3 12512909 12512919 GABPA JASPAR yes 485235
chr3 12512909 12512919 GABPA JASPAR yes 70938720
chr3 12512918 12512930 INSM1 JASPAR yes 485236
chr3 12512918 12512930 INSM1 JASPAR yes 70938721
chr3 12512934 12512943 JDP2 JASPAR yes 485237
chr3 12512934 12512943 JDP2 JASPAR yes 70938722
chr3 12512944 12512959 FOXA1 JASPAR yes 485238
chr3 12512944 12512959 FOXA1 JASPAR yes 70938723
chr3 12512948 12512958 NFIA JASPAR yes 485239
chr3 12512948 12512958 NFIA JASPAR yes 70938724
chr3 12512948 12512959 FOXA1 JASPAR yes 485240
chr3 12512948 12512959 FOXA1 JASPAR yes 70938725
chr3 12512949 12512958 NFIX JASPAR yes 485241
chr3 12512949 12512958 NFIX JASPAR yes 70938726
chr3 12512950 12512956 NFIC JASPAR yes 485242
chr3 12512950 12512956 NFIC JASPAR yes 70938727
chr3 12512954 12512968 JUN JASPAR yes 485243
chr3 12512954 12512968 JUN JASPAR yes 70938728
chr3 12512956 12512967 BATF JASPAR yes 485244
chr3 12512956 12512967 BATF JASPAR yes 70938729
chr3 12512956 12512976 ESR1 JASPAR yes 485245
chr3 12512956 12512976 ESR1 JASPAR yes 70938730
chr3 12512957 12512968 FOSL2 JASPAR yes 485246
chr3 12512957 12512968 JUNB JASPAR yes 485247
chr3 12512957 12512968 FOSL2 JASPAR yes 70938731
chr3 12512957 12512968 JUNB JASPAR yes 70938732
chr3 12512958 12512969 FOS JASPAR yes 485248
chr3 12512958 12512969 FOSL1 JASPAR yes 485249
chr3 12512958 12512969 JUND JASPAR yes 485250
chr3 12512958 12512969 NFE2 JASPAR yes 485251
chr3 12512958 12512969 FOS JASPAR yes 70938733
chr3 12512958 12512969 FOSL1 JASPAR yes 70938734
chr3 12512958 12512969 JUND JASPAR yes 70938735
chr3 12512958 12512969 NFE2 JASPAR yes 70938736
chr3 12512959 12512968 JDP2 JASPAR yes 485252
chr3 12512959 12512968 JDP2 JASPAR yes 70938737
chr3 12512959 12512970 FOSL2 JASPAR yes 485253
chr3 12512959 12512970 JUNB JASPAR yes 485254
chr3 12512959 12512970 FOSL2 JASPAR yes 70938738
chr3 12512959 12512970 JUNB JASPAR yes 70938739
chr3 12512959 12512973 JUN JASPAR yes 485255
chr3 12512959 12512973 JUN JASPAR yes 70938740
chr3 12512961 12512976 ESR2 JASPAR yes 485256
chr3 12512961 12512976 ESR2 JASPAR yes 70938741
chr3 12512966 12512976 SP1 JASPAR yes 485257
chr3 12512966 12512976 SP1 JASPAR yes 70938742
chr3 12512969 12512978 THAP1 JASPAR yes 485258
chr3 12512969 12512978 THAP1 JASPAR yes 70938743
chr3 12512979 12512982 MYB TRANSFAC yes 485259
chr3 12512979 12512982 MYB TRANSFAC yes 70938744
chr3 12512989 12513010 ZNF263 JASPAR yes 485260
chr3 12512989 12513010 ZNF263 JASPAR yes 70938745
chr3 12512997 12513007 SP1 JASPAR yes 485261
chr3 12512997 12513007 SP1 JASPAR yes 70938746
chr3 12513004 12513025 ZNF263 JASPAR yes 485262
chr3 12513004 12513025 ZNF263 JASPAR yes 70938747
chr3 12513014 12513035 REST JASPAR yes 485263
chr3 12513014 12513035 REST JASPAR yes 70938748
chr3 12513026 12513030 H4TF2 TRANSFAC yes 485264
chr3 12513026 12513030 H4TF2 TRANSFAC yes 70938749
chr3 12513036 12513045 SNAI2 JASPAR yes 485265
chr3 12513036 12513045 SNAI2 JASPAR yes 70938750
chr3 12513037 12513042 USF2 TRANSFAC yes 485266
chr3 12513037 12513042 USF2 TRANSFAC yes 70938751
chr3 12513048 12513067 CTCF JASPAR yes 485267
chr3 12513048 12513067 CTCF JASPAR yes 70938752
chr3 12513058 12513072 E2F7 JASPAR yes 485268
chr3 12513058 12513072 E2F7 JASPAR yes 70938753
chr3 12513061 12513072 E2F4 JASPAR yes 485269
chr3 12513061 12513072 E2F6 JASPAR yes 485270
chr3 12513061 12513072 E2F4 JASPAR yes 70938754
chr3 12513061 12513072 E2F6 JASPAR yes 70938755
chr3 12513062 12513067 SP1 TRANSFAC yes 485271
chr3 12513062 12513067 SP1 TRANSFAC yes 70938756
chr3 12513065 12513075 NFKB1 JASPAR yes 485272
chr3 12513065 12513075 NFKB1 JASPAR yes 70938757
chr3 12513065 12513076 NFKB1 JASPAR yes 485273
chr3 12513065 12513076 NFKB1 JASPAR yes 70938758
chr3 12513068 12513082 EBF1 JASPAR yes 485274
chr3 12513068 12513082 EBF1 JASPAR yes 70938759
chr3 12513074 12513092 ESR1 JASPAR yes 485275
chr3 12513074 12513092 ESR1 JASPAR yes 70938760
chr3 12513087 12513108 ZNF263 JASPAR yes 485276
chr3 12513087 12513108 ZNF263 JASPAR yes 70938761
chr3 12513090 12513111 ZNF263 JASPAR yes 485277
chr3 12513090 12513111 ZNF263 JASPAR yes 70938762
chr3 12513116 12513127 ESRRB JASPAR yes 485278
chr3 12513116 12513127 ESRRB JASPAR yes 70938763
SNP sites on vista39989[chr3:12512871-12513125]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 12513027 rs370229942 G A,C
CTCF FOS FOSL2 H4TF2 JUND REST STAT3 TCF7L2
6555014
chr3 12513046 rs3896042 C T
CTCF FOS FOSL2 JUND STAT3 TCF7L2
6555015
Genes possibly regulated by vista39989[chr3:12512871-12513125]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 12525931 12581122 + TSEN2 ENSG00000154743.13 12525931 0.7 0.99 3416 87194
chr3 12556433 12602558 - C3orf83 ENSG00000225526.4 12602558 0.88 1.0 3417 10567
chr3 12598513 12625212 + MKRN2 ENSG00000075975.11 12598513 0.54 0.99 3418 14612
Expression level of Genes
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miRNAs possibly regulated by vista39989[chr3:12512871-12513125]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results