EnhancerDB
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  3. vista39995[chr3:12723455-12723677]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39995[chr3:12723455-12723677]
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Tissue distribution of vista39995
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Transcription factor that possibly regulate vista39995[chr3:12723455-12723677]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 12723439 12723458 RFX2 JASPAR yes 495854
chr3 12723439 12723458 RFX2 JASPAR yes 70938956
chr3 12723443 12723459 RFX2 JASPAR yes 495855
chr3 12723443 12723459 RFX3 JASPAR yes 495856
chr3 12723443 12723459 RFX4 JASPAR yes 495857
chr3 12723443 12723459 RFX2 JASPAR yes 70938957
chr3 12723443 12723459 RFX3 JASPAR yes 70938958
chr3 12723443 12723459 RFX4 JASPAR yes 70938959
chr3 12723467 12723473 MZF1 JASPAR yes 495858
chr3 12723467 12723473 MZF1 JASPAR yes 70938960
chr3 12723470 12723481 ELK4 JASPAR yes 495859
chr3 12723470 12723481 FLI1 JASPAR yes 495860
chr3 12723470 12723481 ELK4 JASPAR yes 70938961
chr3 12723470 12723481 FLI1 JASPAR yes 70938962
chr3 12723470 12723483 ELF3 JASPAR yes 495861
chr3 12723470 12723483 ELF3 JASPAR yes 70938963
chr3 12723471 12723481 ELK1 JASPAR yes 495862
chr3 12723471 12723481 ELK3 JASPAR yes 495863
chr3 12723471 12723481 ERF JASPAR yes 495864
chr3 12723471 12723481 ERG JASPAR yes 495865
chr3 12723471 12723481 ETS1 JASPAR yes 495866
chr3 12723471 12723481 ETV1 JASPAR yes 495867
chr3 12723471 12723481 ETV3 JASPAR yes 495868
chr3 12723471 12723481 ETV4 JASPAR yes 495869
chr3 12723471 12723481 ETV6 JASPAR yes 495870
chr3 12723471 12723481 FEV JASPAR yes 495871
chr3 12723471 12723481 FLI1 JASPAR yes 495872
chr3 12723471 12723481 GABPA JASPAR yes 495873
chr3 12723471 12723481 ELK1 JASPAR yes 70938964
chr3 12723471 12723481 ELK3 JASPAR yes 70938965
chr3 12723471 12723481 ERF JASPAR yes 70938966
chr3 12723471 12723481 ERG JASPAR yes 70938967
chr3 12723471 12723481 ETS1 JASPAR yes 70938968
chr3 12723471 12723481 ETV1 JASPAR yes 70938969
chr3 12723471 12723481 ETV3 JASPAR yes 70938970
chr3 12723471 12723481 ETV4 JASPAR yes 70938971
chr3 12723471 12723481 ETV6 JASPAR yes 70938972
chr3 12723471 12723481 FEV JASPAR yes 70938973
chr3 12723471 12723481 FLI1 JASPAR yes 70938974
chr3 12723471 12723481 GABPA JASPAR yes 70938975
chr3 12723471 12723482 ELF5 JASPAR yes 495874
chr3 12723471 12723482 ETV2 JASPAR yes 495875
chr3 12723471 12723482 ELF5 JASPAR yes 70938976
chr3 12723471 12723482 ETV2 JASPAR yes 70938977
chr3 12723471 12723483 EHF JASPAR yes 495876
chr3 12723471 12723483 ELF1 JASPAR yes 495877
chr3 12723471 12723483 ELF4 JASPAR yes 495878
chr3 12723471 12723483 EHF JASPAR yes 70938978
chr3 12723471 12723483 ELF1 JASPAR yes 70938979
chr3 12723471 12723483 ELF4 JASPAR yes 70938980
chr3 12723471 12723484 ELF1 JASPAR yes 495879
chr3 12723471 12723484 ELF1 JASPAR yes 70938981
chr3 12723471 12723485 SPI1 JASPAR yes 495880
chr3 12723471 12723485 SPI1 JASPAR yes 70938982
chr3 12723472 12723479 SPI1 JASPAR yes 495881
chr3 12723472 12723479 SPI1 JASPAR yes 70938983
chr3 12723472 12723480 EHF JASPAR yes 495882
chr3 12723472 12723480 FEV JASPAR yes 495883
chr3 12723472 12723480 EHF JASPAR yes 70938984
chr3 12723472 12723480 FEV JASPAR yes 70938985
chr3 12723488 12723499 CEBPA JASPAR yes 495884
chr3 12723488 12723499 CEBPA JASPAR yes 70938986
chr3 12723492 12723502 RELA JASPAR yes 495885
chr3 12723492 12723502 RELA JASPAR yes 70938987
chr3 12723502 12723518 SRF JASPAR yes 495886
chr3 12723502 12723518 SRF JASPAR yes 70938988
chr3 12723504 12723514 OLIG2 JASPAR yes 495887
chr3 12723504 12723514 OLIG3 JASPAR yes 495888
chr3 12723504 12723514 OLIG2 JASPAR yes 70938989
chr3 12723504 12723514 OLIG3 JASPAR yes 70938990
chr3 12723505 12723517 SRF JASPAR yes 495889
chr3 12723505 12723517 SRF JASPAR yes 70938991
chr3 12723508 12723512 YY1 TRANSFAC yes 495890
chr3 12723508 12723512 YY1 TRANSFAC yes 70938992
chr3 12723534 12723538 H1TF2 TRANSFAC yes 495891
chr3 12723534 12723538 NFE TRANSFAC yes 495892
chr3 12723534 12723538 SRF TRANSFAC yes 495893
chr3 12723534 12723538 H1TF2 TRANSFAC yes 70938993
chr3 12723534 12723538 NFE TRANSFAC yes 70938994
chr3 12723534 12723538 SRF TRANSFAC yes 70938995
chr3 12723534 12723540 NFYC TRANSFAC yes 495894
chr3 12723534 12723540 NFYC TRANSFAC yes 70938996
chr3 12723542 12723553 RUNX1 JASPAR yes 495895
chr3 12723542 12723553 RUNX1 JASPAR yes 70938997
chr3 12723602 12723617 MEF2C JASPAR yes 495896
chr3 12723602 12723617 MEF2C JASPAR yes 70938998
chr3 12723603 12723609 NFIC JASPAR yes 495897
chr3 12723603 12723609 NFIC JASPAR yes 70938999
chr3 12723605 12723620 FOXP1 JASPAR yes 495898
chr3 12723605 12723620 FOXP1 JASPAR yes 70939000
chr3 12723606 12723621 FOXP1 JASPAR yes 495899
chr3 12723606 12723621 FOXP1 JASPAR yes 70939001
chr3 12723608 12723629 IRF1 JASPAR yes 495900
chr3 12723608 12723629 IRF1 JASPAR yes 70939002
chr3 12723612 12723626 SPI1 JASPAR yes 495901
chr3 12723612 12723626 SPI1 JASPAR yes 70939003
chr3 12723612 12723627 STAT2 JASPAR yes 495902
chr3 12723612 12723627 STAT2 JASPAR yes 70939004
chr3 12723617 12723622 ETS2 TRANSFAC yes 495903
chr3 12723617 12723622 ETS2 TRANSFAC yes 70939005
chr3 12723636 12723649 ELF1 JASPAR yes 495904
chr3 12723636 12723649 ELF1 JASPAR yes 70939006
chr3 12723636 12723650 SPIC JASPAR yes 495905
chr3 12723636 12723650 SPIC JASPAR yes 70939007
chr3 12723651 12723655 NFE TRANSFAC yes 495906
chr3 12723651 12723655 NFE TRANSFAC yes 70939008
chr3 12723651 12723656 GATA1 TRANSFAC yes 495907
chr3 12723651 12723656 GATA1 TRANSFAC yes 70939009
chr3 12723651 12723657 GATA3 JASPAR yes 495908
chr3 12723651 12723657 GATA3 JASPAR yes 70939010
chr3 12723658 12723662 NFE TRANSFAC yes 495909
chr3 12723658 12723662 NFE TRANSFAC yes 70939011
chr3 12723658 12723663 GATA1 TRANSFAC yes 495910
chr3 12723658 12723663 GATA1 TRANSFAC yes 70939012
chr3 12723658 12723664 GATA3 JASPAR yes 495911
chr3 12723658 12723664 GATA3 JASPAR yes 70939013
chr3 12723659 12723680 IRF1 JASPAR yes 495912
chr3 12723659 12723680 IRF1 JASPAR yes 70939014
chr3 12723661 12723676 PRDM1 JASPAR yes 495913
chr3 12723661 12723676 STAT2 JASPAR yes 495914
chr3 12723661 12723676 PRDM1 JASPAR yes 70939015
chr3 12723661 12723676 STAT2 JASPAR yes 70939016
chr3 12723662 12723676 STAT1 JASPAR yes 495915
chr3 12723662 12723676 STAT1 JASPAR yes 70939017
chr3 12723663 12723677 IRF7 JASPAR yes 495916
chr3 12723663 12723677 IRF7 JASPAR yes 70939018
SNP sites on vista39995[chr3:12723455-12723677]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 12723474 rs552197292 C T
EHF ELF1 ELF3 ELF4 ELF5 ELK1 ELK3 ELK4 ERF ERG ETS1 ETV1 ETV2 ETV3 ETV4 ETV6 FEV FLI1 GABPA SPI1
6556160
Genes possibly regulated by vista39995[chr3:12723455-12723677]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 12625100 12705725 - RAF1 ENSG00000132155.7 12705725 0.61 1.0 3419 82270
chr3 12775024 12810956 - TMEM40 ENSG00000088726.11 12810956 0.99 1.0 3420 12721
Expression level of Genes
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miRNAs possibly regulated by vista39995[chr3:12723455-12723677]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results