EnhancerDB
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  3. vista39996[chr3:12893106-12893439]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39996[chr3:12893106-12893439]
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Tissue distribution of vista39996
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Transcription factor that possibly regulate vista39996[chr3:12893106-12893439]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 12893105 12893111 SOX10 JASPAR yes 507436
chr3 12893105 12893111 SOX10 JASPAR yes 70939019
chr3 12893108 12893119 FOXB1 JASPAR yes 507437
chr3 12893108 12893119 FOXB1 JASPAR yes 70939020
chr3 12893112 12893120 FOXL1 JASPAR yes 507438
chr3 12893112 12893120 FOXL1 JASPAR yes 70939021
chr3 12893113 12893127 POU4F1 JASPAR yes 507439
chr3 12893113 12893127 POU4F1 JASPAR yes 70939022
chr3 12893114 12893130 POU4F3 JASPAR yes 507440
chr3 12893114 12893130 POU4F3 JASPAR yes 70939023
chr3 12893116 12893120 TEAD2 TRANSFAC yes 507441
chr3 12893116 12893120 TEAD2 TRANSFAC yes 70939024
chr3 12893116 12893130 POU4F1 JASPAR yes 507442
chr3 12893116 12893130 POU4F1 JASPAR yes 70939025
chr3 12893119 12893132 POU2F2 JASPAR yes 507443
chr3 12893119 12893132 POU2F2 JASPAR yes 70939026
chr3 12893119 12893133 POU1F1 JASPAR yes 507444
chr3 12893119 12893133 POU1F1 JASPAR yes 70939027
chr3 12893120 12893132 POU3F1 JASPAR yes 507445
chr3 12893120 12893132 POU3F2 JASPAR yes 507446
chr3 12893120 12893132 POU3F1 JASPAR yes 70939028
chr3 12893120 12893132 POU3F2 JASPAR yes 70939029
chr3 12893120 12893133 POU3F3 JASPAR yes 507447
chr3 12893120 12893133 POU3F3 JASPAR yes 70939030
chr3 12893121 12893133 POU2F1 JASPAR yes 507448
chr3 12893121 12893133 POU2F1 JASPAR yes 70939031
chr3 12893122 12893131 POU3F4 JASPAR yes 507449
chr3 12893122 12893131 POU5F1B JASPAR yes 507450
chr3 12893122 12893131 POU3F4 JASPAR yes 70939032
chr3 12893122 12893131 POU5F1B JASPAR yes 70939033
chr3 12893122 12893134 POU3F1 JASPAR yes 507451
chr3 12893122 12893134 POU3F1 JASPAR yes 70939034
chr3 12893122 12893135 POU2F2 JASPAR yes 507452
chr3 12893122 12893135 POU2F2 JASPAR yes 70939035
chr3 12893124 12893138 POU4F1 JASPAR yes 507453
chr3 12893124 12893138 POU4F1 JASPAR yes 70939036
chr3 12893124 12893140 POU4F2 JASPAR yes 507454
chr3 12893124 12893140 POU4F3 JASPAR yes 507455
chr3 12893124 12893140 POU4F2 JASPAR yes 70939037
chr3 12893124 12893140 POU4F3 JASPAR yes 70939038
chr3 12893132 12893149 ZNF410 JASPAR yes 507456
chr3 12893132 12893149 ZNF410 JASPAR yes 70939039
chr3 12893167 12893171 NFE TRANSFAC yes 507457
chr3 12893167 12893171 NFE TRANSFAC yes 70939040
chr3 12893179 12893192 ZBTB18 JASPAR yes 507458
chr3 12893179 12893192 ZBTB18 JASPAR yes 70939041
chr3 12893181 12893191 CLOCK JASPAR yes 507459
chr3 12893181 12893191 CLOCK JASPAR yes 70939042
chr3 12893183 12893198 FOXA1 JASPAR yes 507460
chr3 12893183 12893198 FOXA1 JASPAR yes 70939043
chr3 12893185 12893197 FOXC2 JASPAR yes 507461
chr3 12893185 12893197 FOXC2 JASPAR yes 70939044
chr3 12893186 12893197 FOXB1 JASPAR yes 507462
chr3 12893186 12893197 FOXC1 JASPAR yes 507463
chr3 12893186 12893197 FOXB1 JASPAR yes 70939045
chr3 12893186 12893197 FOXC1 JASPAR yes 70939046
chr3 12893187 12893198 FOXA1 JASPAR yes 507464
chr3 12893187 12893198 FOXA1 JASPAR yes 70939047
chr3 12893198 12893203 ETS2 TRANSFAC yes 507465
chr3 12893198 12893203 ETS2 TRANSFAC yes 70939048
chr3 12893203 12893211 NR4A2 JASPAR yes 507466
chr3 12893203 12893211 NR4A2 JASPAR yes 70939049
chr3 12893219 12893233 MTF1 JASPAR yes 507467
chr3 12893219 12893233 MTF1 JASPAR yes 70939050
chr3 12893245 12893260 HNF4G JASPAR yes 507468
chr3 12893245 12893260 NR2C2 JASPAR yes 507469
chr3 12893245 12893260 HNF4G JASPAR yes 70939051
chr3 12893245 12893260 NR2C2 JASPAR yes 70939052
chr3 12893246 12893261 HNF4A JASPAR yes 507470
chr3 12893246 12893261 HNF4A JASPAR yes 70939053
chr3 12893248 12893252 LFA1 TRANSFAC yes 507471
chr3 12893248 12893252 LFA1 TRANSFAC yes 70939054
chr3 12893251 12893262 ESRRA JASPAR yes 507472
chr3 12893251 12893262 ESRRA JASPAR yes 70939055
chr3 12893255 12893259 LFA1 TRANSFAC yes 507473
chr3 12893255 12893259 LFA1 TRANSFAC yes 70939056
chr3 12893294 12893305 E2F6 JASPAR yes 507474
chr3 12893294 12893305 E2F6 JASPAR yes 70939057
chr3 12893322 12893337 FOXP1 JASPAR yes 507475
chr3 12893322 12893337 FOXP1 JASPAR yes 70939058
chr3 12893323 12893337 FOXF2 JASPAR yes 507476
chr3 12893323 12893337 FOXF2 JASPAR yes 70939059
chr3 12893325 12893329 YY1 TRANSFAC yes 507477
chr3 12893325 12893329 YY1 TRANSFAC yes 70939060
chr3 12893342 12893347 GATA2 JASPAR yes 507478
chr3 12893342 12893347 GATA2 JASPAR yes 70939061
chr3 12893346 12893350 NFE TRANSFAC yes 507479
chr3 12893346 12893350 NFE TRANSFAC yes 70939062
chr3 12893353 12893359 ZNF354C JASPAR yes 507480
chr3 12893353 12893359 ZNF354C JASPAR yes 70939063
chr3 12893359 12893363 H4TF2 TRANSFAC yes 507481
chr3 12893359 12893363 H4TF2 TRANSFAC yes 70939064
chr3 12893404 12893425 IRF1 JASPAR yes 507482
chr3 12893404 12893425 IRF1 JASPAR yes 70939065
chr3 12893406 12893421 STAT2 JASPAR yes 507483
chr3 12893406 12893421 STAT2 JASPAR yes 70939066
chr3 12893406 12893427 IRF1 JASPAR yes 507484
chr3 12893406 12893427 IRF1 JASPAR yes 70939067
chr3 12893407 12893428 IRF1 JASPAR yes 507485
chr3 12893407 12893428 IRF1 JASPAR yes 70939068
chr3 12893408 12893429 IRF1 JASPAR yes 507486
chr3 12893408 12893429 IRF1 JASPAR yes 70939069
chr3 12893409 12893424 FOXP1 JASPAR yes 507487
chr3 12893409 12893424 FOXP1 JASPAR yes 70939070
chr3 12893409 12893430 IRF1 JASPAR yes 507488
chr3 12893409 12893430 IRF1 JASPAR yes 70939071
chr3 12893410 12893425 FOXP1 JASPAR yes 507489
chr3 12893410 12893425 FOXP1 JASPAR yes 70939072
chr3 12893410 12893431 IRF1 JASPAR yes 507490
chr3 12893410 12893431 IRF1 JASPAR yes 70939073
chr3 12893411 12893426 FOXP1 JASPAR yes 507491
chr3 12893411 12893426 FOXP1 JASPAR yes 70939074
chr3 12893411 12893432 IRF1 JASPAR yes 507492
chr3 12893411 12893432 IRF1 JASPAR yes 70939075
chr3 12893412 12893427 FOXP1 JASPAR yes 507493
chr3 12893412 12893427 FOXP1 JASPAR yes 70939076
chr3 12893412 12893433 IRF1 JASPAR yes 507494
chr3 12893412 12893433 IRF1 JASPAR yes 70939077
chr3 12893413 12893428 FOXP1 JASPAR yes 507495
chr3 12893413 12893428 FOXP1 JASPAR yes 70939078
chr3 12893413 12893434 IRF1 JASPAR yes 507496
chr3 12893413 12893434 IRF1 JASPAR yes 70939079
chr3 12893414 12893429 FOXP1 JASPAR yes 507497
chr3 12893414 12893429 FOXP1 JASPAR yes 70939080
chr3 12893414 12893435 IRF1 JASPAR yes 507498
chr3 12893414 12893435 IRF1 JASPAR yes 70939081
chr3 12893415 12893430 FOXP1 JASPAR yes 507499
chr3 12893415 12893430 FOXP1 JASPAR yes 70939082
chr3 12893415 12893436 IRF1 JASPAR yes 507500
chr3 12893415 12893436 IRF1 JASPAR yes 70939083
chr3 12893416 12893431 FOXP1 JASPAR yes 507501
chr3 12893416 12893431 FOXP1 JASPAR yes 70939084
chr3 12893416 12893437 IRF1 JASPAR yes 507502
chr3 12893416 12893437 IRF1 JASPAR yes 70939085
chr3 12893417 12893432 FOXP1 JASPAR yes 507503
chr3 12893417 12893432 FOXP1 JASPAR yes 70939086
chr3 12893417 12893438 IRF1 JASPAR yes 507504
chr3 12893417 12893438 IRF1 JASPAR yes 70939087
chr3 12893418 12893433 FOXP1 JASPAR yes 507505
chr3 12893418 12893433 FOXP1 JASPAR yes 70939088
chr3 12893419 12893434 FOXP1 JASPAR yes 507506
chr3 12893419 12893434 FOXP1 JASPAR yes 70939089
chr3 12893420 12893435 FOXP1 JASPAR yes 507507
chr3 12893420 12893435 FOXP1 JASPAR yes 70939090
chr3 12893421 12893436 FOXP1 JASPAR yes 507508
chr3 12893421 12893436 FOXP1 JASPAR yes 70939091
chr3 12893422 12893437 FOXP1 JASPAR yes 507509
chr3 12893422 12893437 FOXP1 JASPAR yes 70939092
chr3 12893423 12893438 FOXP1 JASPAR yes 507510
chr3 12893423 12893438 FOXP1 JASPAR yes 70939093
chr3 12893424 12893439 FOXP1 JASPAR yes 507511
chr3 12893424 12893439 FOXP1 JASPAR yes 70939094
chr3 12893425 12893440 FOXP1 JASPAR yes 507512
chr3 12893425 12893440 FOXP1 JASPAR yes 70939095
SNP sites on vista39996[chr3:12893106-12893439]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 12893110 rs560329666 G A
FOXB1 SOX10
6557561
chr3 12893333 rs142593524 C T
FOXF2 FOXP1
6557562
Genes possibly regulated by vista39996[chr3:12893106-12893439]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 12775024 12810956 - TMEM40 ENSG00000088726.11 12810956 0.99 1.0 3420 17850
chr3 12837971 12913415 + CAND2 ENSG00000144712.7 12837971 0.81 0.93 3421 44865
chr3 12875984 12883087 - RPL32 ENSG00000144713.8 12883087 0.74 1.0 3422 89981
Expression level of Genes
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miRNAs possibly regulated by vista39996[chr3:12893106-12893439]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results