EnhancerDB
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  3. vista4[chr1:855764-856157]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4[chr1:855764-856157]
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Tissue distribution of vista4
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Transcription factor that possibly regulate vista4[chr1:855764-856157]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 855783 855795 NHLH1 JASPAR yes 118213164
chr1 855784 855794 TFAP4 JASPAR yes 118213165
chr1 855793 855808 RUNX2 JASPAR yes 118213166
chr1 855800 855812 INSM1 JASPAR yes 118213167
chr1 855800 855815 NR2C2 JASPAR yes 118213168
chr1 855803 855816 NR2F1 JASPAR yes 118213169
chr1 855835 855854 REST JASPAR yes 118213170
chr1 855839 855859 TP63 JASPAR yes 118213171
chr1 855870 855880 MAX JASPAR yes 118213172
chr1 855870 855881 USF1 JASPAR yes 118213173
chr1 855870 855881 USF2 JASPAR yes 118213174
chr1 855871 855881 BHLHE40 JASPAR yes 118213175
chr1 855871 855881 BHLHE41 JASPAR yes 118213176
chr1 855871 855881 MAX JASPAR yes 118213177
chr1 855871 855881 MLXIPL JASPAR yes 118213178
chr1 855871 855881 MNT JASPAR yes 118213179
chr1 855871 855881 SREBF2 JASPAR yes 118213180
chr1 855871 855881 TFE3 JASPAR yes 118213181
chr1 855871 855881 TFEB JASPAR yes 118213182
chr1 855871 855881 TFEC JASPAR yes 118213183
chr1 855872 855882 MAX JASPAR yes 118213184
chr1 855873 855878 MYC TRANSFAC yes 118213185
chr1 855873 855878 USF1 TRANSFAC yes 118213186
chr1 855873 855878 USF2 TRANSFAC yes 118213187
chr1 855890 855895 SP1 TRANSFAC yes 118213188
chr1 855901 855910 HIC2 JASPAR yes 118213189
chr1 855902 855917 TFAP2A JASPAR yes 118213190
chr1 855950 855961 FLI1 JASPAR yes 118213191
chr1 855951 855961 ERF JASPAR yes 118213192
chr1 855951 855961 ERG JASPAR yes 118213193
chr1 855951 855961 ETS1 JASPAR yes 118213194
chr1 855957 855961 NFE TRANSFAC yes 118213195
chr1 855980 855992 YY1 JASPAR yes 118213196
chr1 855983 855989 YY1 JASPAR yes 118213197
chr1 855988 855994 SOX10 JASPAR yes 118213198
chr1 855995 856010 RFX5 JASPAR yes 118213199
chr1 855998 856012 PLAG1 JASPAR yes 118213200
chr1 856006 856012 MAZ TRANSFAC yes 118213201
chr1 856011 856026 AR JASPAR yes 118213202
chr1 856014 856018 NFE TRANSFAC yes 118213203
chr1 856049 856061 NHLH1 JASPAR yes 118213204
chr1 856080 856089 HIC2 JASPAR yes 118213205
chr1 856083 856087 LFA1 TRANSFAC yes 118213206
chr1 856085 856094 ZEB1 JASPAR yes 118213207
chr1 856086 856096 FIGLA JASPAR yes 118213208
chr1 856086 856096 ID4 JASPAR yes 118213209
chr1 856086 856096 TCF3 JASPAR yes 118213210
chr1 856086 856096 TCF4 JASPAR yes 118213211
chr1 856087 856096 SNAI2 JASPAR yes 118213212
chr1 856088 856093 USF2 TRANSFAC yes 118213213
chr1 856103 856115 HES5 JASPAR yes 118213214
chr1 856104 856114 BHLHE40 JASPAR yes 118213215
chr1 856104 856114 HEY1 JASPAR yes 118213216
chr1 856104 856114 HEY2 JASPAR yes 118213217
chr1 856104 856114 MAX JASPAR yes 118213218
chr1 856104 856114 MNT JASPAR yes 118213219
chr1 856104 856114 TFE3 JASPAR yes 118213220
chr1 856104 856114 TFEB JASPAR yes 118213221
chr1 856105 856112 USF1 JASPAR yes 118213222
chr1 856105 856115 MAX JASPAR yes 118213223
chr1 856106 856111 MYC TRANSFAC yes 118213224
chr1 856106 856111 USF1 TRANSFAC yes 118213225
chr1 856106 856111 USF2 TRANSFAC yes 118213226
chr1 856108 856119 ESRRA JASPAR yes 118213227
chr1 856118 856133 RFX5 JASPAR yes 118213228
chr1 856134 856147 ZBTB18 JASPAR yes 118213229
chr1 856135 856147 NHLH1 JASPAR yes 118213230
chr1 856136 856146 NHLH1 JASPAR yes 118213231
chr1 856136 856146 TFAP4 JASPAR yes 118213232
SNP sites on vista4[chr1:855764-856157]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 855764 rs532194000 C T no 1021
chr1 855774 rs77595185 G A no 1022
chr1 855808 rs562561691 T C
INSM1 NR2C2 NR2F1 RUNX2
1023
chr1 855878 rs117282503 T C
BHLHE40 BHLHE41 MAX MLXIPL MNT MYC SREBF2 TFE3 TFEB TFEC USF1 USF2
1024
chr1 855929 rs547328031 C T no 1025
chr1 855949 rs77568453 G A no 1026
chr1 855968 rs115516786 C T no 1027
chr1 855977 rs556154717 T C,G no 1028
chr1 855996 rs114463016 C T
RFX5
1029
chr1 856020 rs578252934 T C
AR
1030
chr1 856041 rs61769717 G A,C no 1031
chr1 856042 rs115560414 C T no 1032
chr1 856044 rs145404879 C T no 1033
chr1 856049 rs561910753 G T
NHLH1
1034
chr1 856055 rs188400142 G T
NHLH1
1035
chr1 856099 rs28534711 T G no 1036
chr1 856108 rs28742275 A G
BHLHE40 ESRRA HES5 HEY1 HEY2 MAX MNT MYC TFE3 TFEB USF1 USF2
1037
chr1 856121 rs140972875 G A
RFX5
1038
Genes possibly regulated by vista4[chr1:855764-856157]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 818043 819983 + AL645608.2 ENSG00000269308.1 818043 0.0 0.0 4 62279
chr1 860260 879955 + SAMD11 ENSG00000187634.6 860260 0.92 1.0 5 95897
chr1 861264 866445 - AL645608.1 ENSG00000268179.1 866445 1.0 1.0 6 89712
chr1 879584 894689 - NOC2L ENSG00000188976.6 894689 0.69 1.0 7 61468
chr1 895967 901095 + KLHL17 ENSG00000187961.9 895967 0.67 1.0 8 60190
chr1 901877 911245 + PLEKHN1 ENSG00000187583.6 901877 0.96 1.0 9 54280
chr1 910579 917497 - C1orf170 ENSG00000187642.5 917497 0.99 1.0 10 38660
chr1 934342 935552 - HES4 ENSG00000188290.6 935552 0.71 1.0 11 20605
chr1 948803 949920 + ISG15 ENSG00000187608.5 948803 0.81 1.0 12 7354
chr1 955503 991496 + AGRN ENSG00000188157.9 955503 0.91 1.0 13 654
Expression level of Genes
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miRNAs possibly regulated by vista4[chr1:855764-856157]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results