EnhancerDB
  1. Home
  2. Enhancers
  3. vista40000[chr3:12972627-12972739]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40000[chr3:12972627-12972739]
Back to top
Tissue distribution of vista40000
Back to top
Transcription factor that possibly regulate vista40000[chr3:12972627-12972739]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 12972625 12972644 CTCF JASPAR yes 512632
chr3 12972625 12972644 CTCF JASPAR yes 70939256
chr3 12972628 12972642 GLIS2 JASPAR yes 512633
chr3 12972628 12972642 ZIC1 JASPAR yes 512634
chr3 12972628 12972642 GLIS2 JASPAR yes 70939257
chr3 12972628 12972642 ZIC1 JASPAR yes 70939258
chr3 12972628 12972643 ZIC3 JASPAR yes 512635
chr3 12972628 12972643 ZIC4 JASPAR yes 512636
chr3 12972628 12972643 ZIC3 JASPAR yes 70939259
chr3 12972628 12972643 ZIC4 JASPAR yes 70939260
chr3 12972631 12972644 TFAP2B JASPAR yes 512637
chr3 12972631 12972644 TFAP2B JASPAR yes 70939261
chr3 12972638 12972649 NFKB1 JASPAR yes 512638
chr3 12972638 12972649 NFKB1 JASPAR yes 70939262
chr3 12972646 12972656 NFIA JASPAR yes 512639
chr3 12972646 12972656 NFIA JASPAR yes 70939263
chr3 12972647 12972656 NFIX JASPAR yes 512640
chr3 12972647 12972656 NFIX JASPAR yes 70939264
chr3 12972648 12972654 NFIC JASPAR yes 512641
chr3 12972648 12972654 NFIC JASPAR yes 70939265
chr3 12972654 12972658 NFE TRANSFAC yes 512642
chr3 12972654 12972658 NFE TRANSFAC yes 70939266
chr3 12972718 12972728 GCM2 JASPAR yes 512643
chr3 12972718 12972728 GCM2 JASPAR yes 70939267
chr3 12972718 12972729 GCM1 JASPAR yes 512644
chr3 12972718 12972729 GCM1 JASPAR yes 70939268
chr3 12972727 12972741 NR2F1 JASPAR yes 512645
chr3 12972727 12972741 NR2F1 JASPAR yes 70939269
chr3 12972733 12972748 HNF4G JASPAR yes 512646
chr3 12972733 12972748 TFAP2A JASPAR yes 512647
chr3 12972733 12972748 HNF4G JASPAR yes 70939270
chr3 12972733 12972748 TFAP2A JASPAR yes 70939271
chr3 12972734 12972749 HNF4A JASPAR yes 512648
chr3 12972734 12972749 HNF4A JASPAR yes 70939272
chr3 12972737 12972757 ESR1 JASPAR yes 512649
chr3 12972737 12972757 ESR1 JASPAR yes 70939273
SNP sites on vista40000[chr3:12972627-12972739]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 12972663 rs544752873 T C no 6558166
chr3 12972695 rs147418512 C G no 6558167
Genes possibly regulated by vista40000[chr3:12972627-12972739]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 12875984 12883087 - RPL32 ENSG00000144713.8 12883087 0.74 1.0 3422 10460
Expression level of Genes
Back to top
miRNAs possibly regulated by vista40000[chr3:12972627-12972739]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results