EnhancerDB
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  3. vista40003[chr3:13040844-13041238]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40003[chr3:13040844-13041238]
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Tissue distribution of vista40003
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Transcription factor that possibly regulate vista40003[chr3:13040844-13041238]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 13040766 13041135 BHLHE40 UCSC Txn Factor no Conserved 108528273
chr3 13040805 13041257 MYC UCSC Txn Factor no Conserved 108528274
chr3 13040819 13041275 JUND UCSC Txn Factor no Conserved 108528275
chr3 13040881 13041217 MAX UCSC Txn Factor no Conserved 108528276
chr3 13040889 13041191 MAFK UCSC Txn Factor no Conserved 108528277
chr3 13040908 13041178 USF1 UCSC Txn Factor no Conserved 108528278
chr3 13040924 13041178 EGR1 UCSC Txn Factor no Conserved 108528279
chr3 13040932 13041146 NR2F2 UCSC Txn Factor no Conserved 108528280
chr3 13040945 13041210 CEBPB UCSC Txn Factor no Conserved 108528281
chr3 13040976 13041228 RUNX3 UCSC Txn Factor no Conserved 108528282
chr3 13041053 13041305 ELF1 UCSC Txn Factor no Conserved 108528283
chr3 13041111 13041315 SPI1 UCSC Txn Factor no Conserved 108528284
chr3 13040835 13040856 ZNF263 JASPAR yes 520079
chr3 13040835 13040856 ZNF263 JASPAR yes 70939417
chr3 13040902 13040907 ETS2 TRANSFAC yes 520080
chr3 13040902 13040907 ETS2 TRANSFAC yes 70939418
chr3 13040903 13040917 SPI1 JASPAR yes 520081
chr3 13040903 13040917 SPI1 JASPAR yes 70939419
chr3 13040930 13040945 STAT1 JASPAR yes 520082
chr3 13040930 13040945 STAT1 JASPAR yes 70939420
chr3 13040932 13040943 STAT3 JASPAR yes 520083
chr3 13040932 13040943 STAT3 JASPAR yes 70939421
chr3 13040954 13040958 YY1 TRANSFAC yes 520084
chr3 13040954 13040958 YY1 TRANSFAC yes 70939422
chr3 13040954 13040965 ETV2 JASPAR yes 520085
chr3 13040954 13040965 ETV2 JASPAR yes 70939423
chr3 13040955 13040963 FEV JASPAR yes 520086
chr3 13040955 13040963 FEV JASPAR yes 70939424
chr3 13040957 13040964 SPIB JASPAR yes 520087
chr3 13040957 13040964 SPIB JASPAR yes 70939425
chr3 13040969 13040981 INSM1 JASPAR yes 520088
chr3 13040969 13040981 INSM1 JASPAR yes 70939426
chr3 13040991 13040995 NFE TRANSFAC yes 520089
chr3 13040991 13040995 NFE TRANSFAC yes 70939427
chr3 13040995 13041010 NR2C2 JASPAR yes 520090
chr3 13040995 13041010 NR2C2 JASPAR yes 70939428
chr3 13040996 13041010 RXRB JASPAR yes 520091
chr3 13040996 13041010 RXRG JASPAR yes 520092
chr3 13040996 13041010 RXRB JASPAR yes 70939429
chr3 13040996 13041010 RXRG JASPAR yes 70939430
chr3 13041000 13041010 RORA JASPAR yes 520093
chr3 13041000 13041010 RORA JASPAR yes 70939431
chr3 13041005 13041009 ESR1 TRANSFAC yes 520094
chr3 13041005 13041009 ESR1 TRANSFAC yes 70939432
chr3 13041008 13041023 RUNX2 JASPAR yes 520095
chr3 13041008 13041023 RUNX2 JASPAR yes 70939433
chr3 13041021 13041026 TFAP2A TRANSFAC yes 520096
chr3 13041021 13041026 TFAP2A TRANSFAC yes 70939434
chr3 13041021 13041027 MZF1 JASPAR yes 520097
chr3 13041021 13041027 MZF1 JASPAR yes 70939435
chr3 13041024 13041036 PKNOX1 JASPAR yes 520098
chr3 13041024 13041036 PKNOX2 JASPAR yes 520099
chr3 13041024 13041036 TGIF2 JASPAR yes 520100
chr3 13041024 13041036 PKNOX1 JASPAR yes 70939436
chr3 13041024 13041036 PKNOX2 JASPAR yes 70939437
chr3 13041024 13041036 TGIF2 JASPAR yes 70939438
chr3 13041030 13041041 NFE2L2 JASPAR yes 520101
chr3 13041030 13041041 NFE2L2 JASPAR yes 70939439
chr3 13041041 13041053 E2F1 JASPAR yes 520102
chr3 13041041 13041053 E2F1 JASPAR yes 70939440
chr3 13041047 13041057 MAX JASPAR yes 520103
chr3 13041047 13041057 MAX JASPAR yes 70939441
chr3 13041049 13041056 USF1 JASPAR yes 520104
chr3 13041049 13041056 USF1 JASPAR yes 70939442
chr3 13041050 13041055 MYC TRANSFAC yes 520105
chr3 13041050 13041055 USF1 TRANSFAC yes 520106
chr3 13041050 13041055 USF2 TRANSFAC yes 520107
chr3 13041050 13041055 MYC TRANSFAC yes 70939443
chr3 13041050 13041055 USF1 TRANSFAC yes 70939444
chr3 13041050 13041055 USF2 TRANSFAC yes 70939445
chr3 13041050 13041057 USF1 JASPAR yes 520108
chr3 13041050 13041057 USF1 JASPAR yes 70939446
chr3 13041054 13041064 SP1 JASPAR yes 520109
chr3 13041054 13041064 SP1 JASPAR yes 70939447
chr3 13041055 13041063 SP1 TRANSFAC yes 520110
chr3 13041055 13041063 SP1 TRANSFAC yes 70939448
chr3 13041055 13041064 SP1 TRANSFAC yes 520111
chr3 13041055 13041064 SP1 TRANSFAC yes 70939449
chr3 13041055 13041065 SP1 JASPAR yes 520112
chr3 13041055 13041065 SP1 JASPAR yes 70939450
chr3 13041056 13041061 SP1 TRANSFAC yes 520113
chr3 13041056 13041061 SP1 TRANSFAC yes 70939451
chr3 13041057 13041062 SP1 TRANSFAC yes 520114
chr3 13041057 13041062 SP1 TRANSFAC yes 70939452
chr3 13041057 13041063 SP1 TRANSFAC yes 520115
chr3 13041057 13041063 SP1 TRANSFAC yes 70939453
chr3 13041076 13041082 SOX10 JASPAR yes 520116
chr3 13041076 13041082 SOX10 JASPAR yes 70939454
chr3 13041077 13041089 PROX1 JASPAR yes 520117
chr3 13041077 13041089 PROX1 JASPAR yes 70939455
chr3 13041091 13041105 STAT1 JASPAR yes 520118
chr3 13041091 13041105 STAT1 JASPAR yes 70939456
chr3 13041091 13041106 STAT2 JASPAR yes 520119
chr3 13041091 13041106 STAT2 JASPAR yes 70939457
chr3 13041092 13041104 IRF1 JASPAR yes 520120
chr3 13041092 13041104 IRF1 JASPAR yes 70939458
chr3 13041099 13041119 RREB1 JASPAR yes 520121
chr3 13041099 13041119 RREB1 JASPAR yes 70939459
chr3 13041105 13041115 SREBF1 JASPAR yes 520122
chr3 13041105 13041115 SREBF2 JASPAR yes 520123
chr3 13041105 13041115 SREBF1 JASPAR yes 70939460
chr3 13041105 13041115 SREBF2 JASPAR yes 70939461
chr3 13041108 13041118 SP1 JASPAR yes 520124
chr3 13041108 13041118 SP1 JASPAR yes 70939462
chr3 13041117 13041127 GSC JASPAR yes 520125
chr3 13041117 13041127 GSC JASPAR yes 70939463
chr3 13041127 13041134 E2F1 TRANSFAC yes 520126
chr3 13041127 13041134 E2F1 TRANSFAC yes 70939464
chr3 13041138 13041148 SP1 JASPAR yes 520127
chr3 13041138 13041148 SP1 JASPAR yes 70939465
chr3 13041139 13041146 SP1 TRANSFAC yes 520128
chr3 13041139 13041146 SP1 TRANSFAC yes 70939466
chr3 13041140 13041145 SP1 TRANSFAC yes 520129
chr3 13041140 13041145 SP1 TRANSFAC yes 70939467
chr3 13041140 13041146 SP1 TRANSFAC yes 520130
chr3 13041140 13041146 SP1 TRANSFAC yes 70939468
chr3 13041140 13041147 SP1 TRANSFAC yes 520131
chr3 13041140 13041147 SP1 TRANSFAC yes 70939469
chr3 13041141 13041153 INSM1 JASPAR yes 520132
chr3 13041141 13041153 INSM1 JASPAR yes 70939470
chr3 13041141 13041156 NR2C2 JASPAR yes 520133
chr3 13041141 13041156 NR2C2 JASPAR yes 70939471
chr3 13041152 13041163 CDX2 JASPAR yes 520134
chr3 13041152 13041163 CDX2 JASPAR yes 70939472
chr3 13041160 13041164 NFE TRANSFAC yes 520135
chr3 13041160 13041164 NFE TRANSFAC yes 70939473
chr3 13041166 13041172 SOX10 JASPAR yes 520136
chr3 13041166 13041172 SOX10 JASPAR yes 70939474
chr3 13041167 13041181 SPI1 JASPAR yes 520137
chr3 13041167 13041181 SPI1 JASPAR yes 70939475
chr3 13041168 13041181 ELF1 JASPAR yes 520138
chr3 13041168 13041181 ELF1 JASPAR yes 70939476
chr3 13041169 13041181 EHF JASPAR yes 520139
chr3 13041169 13041181 ELF1 JASPAR yes 520140
chr3 13041169 13041181 ELF4 JASPAR yes 520141
chr3 13041169 13041181 EHF JASPAR yes 70939477
chr3 13041169 13041181 ELF1 JASPAR yes 70939478
chr3 13041169 13041181 ELF4 JASPAR yes 70939479
chr3 13041169 13041182 ELF3 JASPAR yes 520142
chr3 13041169 13041182 ELF3 JASPAR yes 70939480
chr3 13041170 13041181 ELF5 JASPAR yes 520143
chr3 13041170 13041181 ELF5 JASPAR yes 70939481
chr3 13041171 13041181 ERF JASPAR yes 520144
chr3 13041171 13041181 ETV6 JASPAR yes 520145
chr3 13041171 13041181 ERF JASPAR yes 70939482
chr3 13041171 13041181 ETV6 JASPAR yes 70939483
chr3 13041171 13041182 FLI1 JASPAR yes 520146
chr3 13041171 13041182 FLI1 JASPAR yes 70939484
chr3 13041172 13041180 EHF JASPAR yes 520147
chr3 13041172 13041180 FEV JASPAR yes 520148
chr3 13041172 13041180 EHF JASPAR yes 70939485
chr3 13041172 13041180 FEV JASPAR yes 70939486
chr3 13041173 13041180 SPI1 JASPAR yes 520149
chr3 13041173 13041180 SPI1 JASPAR yes 70939487
chr3 13041186 13041207 IRF1 JASPAR yes 520150
chr3 13041186 13041207 IRF1 JASPAR yes 70939488
chr3 13041225 13041229 ESR1 TRANSFAC yes 520151
chr3 13041225 13041229 ESR1 TRANSFAC yes 70939489
chr3 13041225 13041235 EVX1 JASPAR yes 520152
chr3 13041225 13041235 EVX2 JASPAR yes 520153
chr3 13041225 13041235 HOXA2 JASPAR yes 520154
chr3 13041225 13041235 MEOX1 JASPAR yes 520155
chr3 13041225 13041235 EVX1 JASPAR yes 70939490
chr3 13041225 13041235 EVX2 JASPAR yes 70939491
chr3 13041225 13041235 HOXA2 JASPAR yes 70939492
chr3 13041225 13041235 MEOX1 JASPAR yes 70939493
chr3 13041228 13041232 YY1 TRANSFAC yes 520156
chr3 13041228 13041232 YY1 TRANSFAC yes 70939494
chr3 13041231 13041246 HSF1 JASPAR yes 520157
chr3 13041231 13041246 HSF1 JASPAR yes 70939495
chr3 13041232 13041245 HSF1 JASPAR yes 520158
chr3 13041232 13041245 HSF1 JASPAR yes 70939496
SNP sites on vista40003[chr3:13040844-13041238]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 13040891 rs187708386 G A
BHLHE40 JUND MAFK MAX MYC
6558966
chr3 13040969 rs375753298 G A
BHLHE40 CEBPB EGR1 INSM1 JUND MAFK MAX MYC NR2F2 USF1
6558967
chr3 13041053 rs60092019 C T
BHLHE40 CEBPB E2F1 EGR1 ELF1 JUND MAFK MAX MYC NR2F2 RUNX3 USF1 USF2
6558968
chr3 13041138 rs13061279 G A
CEBPB EGR1 ELF1 JUND MAFK MAX MYC NR2F2 RUNX3 SP1 SPI1 USF1
6558969
Genes possibly regulated by vista40003[chr3:13040844-13041238]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 12938719 13114617 - IQSEC1 ENSG00000144711.9 13114617 0.71 0.99 3423 26621
Expression level of Genes
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miRNAs possibly regulated by vista40003[chr3:13040844-13041238]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results