EnhancerDB
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  3. vista40005[chr3:13045680-13046084]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40005[chr3:13045680-13046084]
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Tissue distribution of vista40005
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Transcription factor that possibly regulate vista40005[chr3:13045680-13046084]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 13045718 13045724 SOX10 JASPAR yes 520846
chr3 13045718 13045724 SOX10 JASPAR yes 70939567
chr3 13045748 13045758 MAX JASPAR yes 520847
chr3 13045748 13045758 MAX JASPAR yes 70939568
chr3 13045759 13045777 TP53 JASPAR yes 520848
chr3 13045759 13045777 TP53 JASPAR yes 70939569
chr3 13045782 13045793 BATF JASPAR yes 520849
chr3 13045782 13045793 BATF JASPAR yes 70939570
chr3 13045787 13045791 YY1 TRANSFAC yes 520850
chr3 13045787 13045791 YY1 TRANSFAC yes 70939571
chr3 13045795 13045807 FOXI1 JASPAR yes 520851
chr3 13045795 13045807 FOXI1 JASPAR yes 70939572
chr3 13045802 13045806 YY1 TRANSFAC yes 520852
chr3 13045802 13045806 YY1 TRANSFAC yes 70939573
chr3 13045802 13045814 EHF JASPAR yes 520853
chr3 13045802 13045814 ELF1 JASPAR yes 520854
chr3 13045802 13045814 EHF JASPAR yes 70939574
chr3 13045802 13045814 ELF1 JASPAR yes 70939575
chr3 13045803 13045811 FEV JASPAR yes 520855
chr3 13045803 13045811 FEV JASPAR yes 70939576
chr3 13045814 13045820 YY1 JASPAR yes 520856
chr3 13045814 13045820 YY1 JASPAR yes 70939577
chr3 13045826 13045845 PAX5 JASPAR yes 520857
chr3 13045826 13045845 PAX5 JASPAR yes 70939578
chr3 13045829 13045839 EVX1 JASPAR yes 520858
chr3 13045829 13045839 EVX2 JASPAR yes 520859
chr3 13045829 13045839 EVX1 JASPAR yes 70939579
chr3 13045829 13045839 EVX2 JASPAR yes 70939580
chr3 13045832 13045844 NHLH1 JASPAR yes 520860
chr3 13045832 13045844 NHLH1 JASPAR yes 70939581
chr3 13045833 13045843 NHLH1 JASPAR yes 520861
chr3 13045833 13045843 TFAP4 JASPAR yes 520862
chr3 13045833 13045843 NHLH1 JASPAR yes 70939582
chr3 13045833 13045843 TFAP4 JASPAR yes 70939583
chr3 13045861 13045880 CTCF JASPAR yes 520863
chr3 13045861 13045880 CTCF JASPAR yes 70939584
chr3 13045863 13045872 THAP1 JASPAR yes 520864
chr3 13045863 13045872 THAP1 JASPAR yes 70939585
chr3 13045864 13045876 TFAP2B JASPAR yes 520865
chr3 13045864 13045876 TFAP2C JASPAR yes 520866
chr3 13045864 13045876 TFAP2B JASPAR yes 70939586
chr3 13045864 13045876 TFAP2C JASPAR yes 70939587
chr3 13045881 13045893 NHLH1 JASPAR yes 520867
chr3 13045881 13045893 NHLH1 JASPAR yes 70939588
chr3 13045882 13045892 NHLH1 JASPAR yes 520868
chr3 13045882 13045892 NHLH1 JASPAR yes 70939589
chr3 13045890 13045895 SP1 TRANSFAC yes 520869
chr3 13045890 13045895 SP1 TRANSFAC yes 70939590
chr3 13045890 13045897 SP1 TRANSFAC yes 520870
chr3 13045890 13045897 SP1 TRANSFAC yes 70939591
chr3 13045890 13045900 SP1 JASPAR yes 520871
chr3 13045890 13045900 SP1 JASPAR yes 70939592
chr3 13045904 13045919 ZIC3 JASPAR yes 520872
chr3 13045904 13045919 ZIC4 JASPAR yes 520873
chr3 13045904 13045919 ZIC3 JASPAR yes 70939593
chr3 13045904 13045919 ZIC4 JASPAR yes 70939594
chr3 13045906 13045925 CTCF JASPAR yes 520874
chr3 13045906 13045925 CTCF JASPAR yes 70939595
chr3 13045912 13045922 MZF1 JASPAR yes 520875
chr3 13045912 13045922 MZF1 JASPAR yes 70939596
chr3 13045917 13045922 ETS2 TRANSFAC yes 520876
chr3 13045917 13045922 ETS2 TRANSFAC yes 70939597
chr3 13045929 13045940 NFKB1 JASPAR yes 520877
chr3 13045929 13045940 NFKB1 JASPAR yes 70939598
chr3 13045955 13045965 SP1 JASPAR yes 520878
chr3 13045955 13045965 SP1 JASPAR yes 70939599
chr3 13045986 13045990 LFA1 TRANSFAC yes 520879
chr3 13045986 13045990 LFA1 TRANSFAC yes 70939600
chr3 13046002 13046013 FOSL2 JASPAR yes 520880
chr3 13046002 13046013 JUNB JASPAR yes 520881
chr3 13046002 13046013 FOSL2 JASPAR yes 70939601
chr3 13046002 13046013 JUNB JASPAR yes 70939602
chr3 13046002 13046016 JUN JASPAR yes 520882
chr3 13046002 13046016 JUN JASPAR yes 70939603
chr3 13046003 13046009 JUN TRANSFAC yes 520883
chr3 13046003 13046009 JUN TRANSFAC yes 70939604
chr3 13046016 13046037 ZNF263 JASPAR yes 520884
chr3 13046016 13046037 ZNF263 JASPAR yes 70939605
chr3 13046020 13046041 ZNF263 JASPAR yes 520885
chr3 13046020 13046041 ZNF263 JASPAR yes 70939606
chr3 13046023 13046033 SP1 JASPAR yes 520886
chr3 13046023 13046033 SP1 JASPAR yes 70939607
chr3 13046023 13046044 ZNF263 JASPAR yes 520887
chr3 13046023 13046044 ZNF263 JASPAR yes 70939608
chr3 13046024 13046030 SP1 TRANSFAC yes 520888
chr3 13046024 13046030 SP1 TRANSFAC yes 70939609
chr3 13046024 13046034 SP1 JASPAR yes 520889
chr3 13046024 13046034 SP1 JASPAR yes 70939610
chr3 13046027 13046048 ZNF263 JASPAR yes 520890
chr3 13046027 13046048 ZNF263 JASPAR yes 70939611
chr3 13046028 13046039 E2F6 JASPAR yes 520891
chr3 13046028 13046039 E2F6 JASPAR yes 70939612
chr3 13046029 13046050 ZNF263 JASPAR yes 520892
chr3 13046029 13046050 ZNF263 JASPAR yes 70939613
chr3 13046035 13046046 E2F6 JASPAR yes 520893
chr3 13046035 13046046 E2F6 JASPAR yes 70939614
chr3 13046048 13046056 RHOXF1 JASPAR yes 520894
chr3 13046048 13046056 RHOXF1 JASPAR yes 70939615
chr3 13046049 13046066 RXRA JASPAR yes 520895
chr3 13046049 13046066 RXRA JASPAR yes 70939616
chr3 13046053 13046057 TEAD2 TRANSFAC yes 520896
chr3 13046053 13046057 TEAD2 TRANSFAC yes 70939617
chr3 13046056 13046061 ETS2 TRANSFAC yes 520897
chr3 13046056 13046061 ETS2 TRANSFAC yes 70939618
chr3 13046056 13046064 FEV JASPAR yes 520898
chr3 13046056 13046064 FEV JASPAR yes 70939619
chr3 13046057 13046064 SPI1 JASPAR yes 520899
chr3 13046057 13046064 SPI1 JASPAR yes 70939620
chr3 13046057 13046071 STAT1 JASPAR yes 520900
chr3 13046057 13046071 STAT1 JASPAR yes 70939621
chr3 13046058 13046070 IRF1 JASPAR yes 520901
chr3 13046058 13046070 IRF1 JASPAR yes 70939622
chr3 13046068 13046072 NFE TRANSFAC yes 520902
chr3 13046068 13046072 NFE TRANSFAC yes 70939623
chr3 13046071 13046085 MTF1 JASPAR yes 520903
chr3 13046071 13046085 MTF1 JASPAR yes 70939624
chr3 13046082 13046100 RARA JASPAR yes 520904
chr3 13046082 13046100 RARA JASPAR yes 70939625
chr3 13046084 13046094 MSC JASPAR yes 520905
chr3 13046084 13046094 MSC JASPAR yes 70939626
SNP sites on vista40005[chr3:13045680-13046084]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 13045800 rs138987321 A C
FOXI1
6559021
chr3 13045896 rs71306035 C G,T
SP1
6559022
chr3 13045925 rs188507320 C G
CTCF
6559023
chr3 13045939 rs892272 C T
NFKB1
6559024
chr3 13046036 rs567776738 T G
E2F6 ZNF263
6559025
Genes possibly regulated by vista40005[chr3:13045680-13046084]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 12938719 13114617 - IQSEC1 ENSG00000144711.9 13114617 0.71 0.99 3423 31467
Expression level of Genes
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miRNAs possibly regulated by vista40005[chr3:13045680-13046084]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results