EnhancerDB
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  3. vista4001[chr1:176501841-176501939]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4001[chr1:176501841-176501939]
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Tissue distribution of vista4001
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Transcription factor that possibly regulate vista4001[chr1:176501841-176501939]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 176501837 176501847 TBX21 JASPAR yes 33328687
chr1 176501837 176501847 TBX21 JASPAR yes 118404001
chr1 176501837 176501848 TBX20 JASPAR yes 33328688
chr1 176501837 176501848 TBX2 JASPAR yes 33328689
chr1 176501837 176501848 TBX20 JASPAR yes 118404002
chr1 176501837 176501848 TBX2 JASPAR yes 118404003
chr1 176501837 176501850 EOMES JASPAR yes 33328690
chr1 176501837 176501850 EOMES JASPAR yes 118404004
chr1 176501838 176501846 MGA JASPAR yes 33328691
chr1 176501838 176501846 TBX15 JASPAR yes 33328692
chr1 176501838 176501846 TBX1 JASPAR yes 33328693
chr1 176501838 176501846 TBX4 JASPAR yes 33328694
chr1 176501838 176501846 TBX5 JASPAR yes 33328695
chr1 176501838 176501846 MGA JASPAR yes 118404005
chr1 176501838 176501846 TBX15 JASPAR yes 118404006
chr1 176501838 176501846 TBX1 JASPAR yes 118404007
chr1 176501838 176501846 TBX4 JASPAR yes 118404008
chr1 176501838 176501846 TBX5 JASPAR yes 118404009
chr1 176501845 176501860 HSF1 JASPAR yes 33328696
chr1 176501845 176501860 HSF1 JASPAR yes 118404010
chr1 176501846 176501859 HSF4 JASPAR yes 33328697
chr1 176501846 176501859 HSF4 JASPAR yes 118404011
chr1 176501855 176501866 STAT3 JASPAR yes 33328698
chr1 176501855 176501866 STAT3 JASPAR yes 118404012
chr1 176501864 176501877 SMAD2 JASPAR yes 33328699
chr1 176501864 176501877 SMAD2 JASPAR yes 118404013
chr1 176501879 176501893 XBP1 JASPAR yes 33328700
chr1 176501879 176501893 XBP1 JASPAR yes 118404014
chr1 176501880 176501894 CREB3 JASPAR yes 33328701
chr1 176501880 176501894 CREB3L1 JASPAR yes 33328702
chr1 176501880 176501894 CREB3 JASPAR yes 118404015
chr1 176501880 176501894 CREB3L1 JASPAR yes 118404016
chr1 176501882 176501900 TP63 JASPAR yes 33328703
chr1 176501882 176501900 TP73 JASPAR yes 33328704
chr1 176501882 176501900 TP63 JASPAR yes 118404017
chr1 176501882 176501900 TP73 JASPAR yes 118404018
chr1 176501884 176501899 TP53 JASPAR yes 33328705
chr1 176501884 176501899 TP53 JASPAR yes 118404019
chr1 176501885 176501890 ATF1 TRANSFAC yes 33328706
chr1 176501885 176501890 ATF1 TRANSFAC yes 118404020
chr1 176501899 176501914 RUNX2 JASPAR yes 33328707
chr1 176501899 176501914 RUNX2 JASPAR yes 118404021
chr1 176501906 176501916 SREBF1 JASPAR yes 33328708
chr1 176501906 176501916 SREBF2 JASPAR yes 33328709
chr1 176501906 176501916 SREBF1 JASPAR yes 118404022
chr1 176501906 176501916 SREBF2 JASPAR yes 118404023
chr1 176501920 176501926 LEF1 TRANSFAC yes 33328710
chr1 176501920 176501926 SOX10 JASPAR yes 33328711
chr1 176501920 176501926 LEF1 TRANSFAC yes 118404024
chr1 176501920 176501926 SOX10 JASPAR yes 118404025
SNP sites on vista4001[chr1:176501841-176501939]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 176501931 rs144816968 G A no 746613
Genes possibly regulated by vista4001[chr1:176501841-176501939]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 176432307 176814735 + PAPPA2 ENSG00000116183.6 176432307 0.97 0.99 1594 30466
Expression level of Genes
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miRNAs possibly regulated by vista4001[chr1:176501841-176501939]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr1 176998510 176998530 - hsa-miR-488-3p MIMAT0004763 177133842 0.11984391875907617 0.821413 0.0 100
Expression level of miRNAs
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