EnhancerDB
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  3. vista40011[chr3:13087949-13088097]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40011[chr3:13087949-13088097]
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Tissue distribution of vista40011
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Transcription factor that possibly regulate vista40011[chr3:13087949-13088097]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 13087645 13087975 BHLHE40 UCSC Txn Factor no Conserved 108528289
chr3 13087777 13088156 EBF1 UCSC Txn Factor no Conserved 108528290
chr3 13087954 13087971 ESR1 JASPAR yes 525146
chr3 13087954 13087971 ESR1 JASPAR yes 70939797
chr3 13087955 13087970 ESR2 JASPAR yes 525147
chr3 13087955 13087970 ESR2 JASPAR yes 70939798
chr3 13087970 13087981 FLI1 JASPAR yes 525148
chr3 13087970 13087981 FLI1 JASPAR yes 70939799
chr3 13087972 13087980 EHF JASPAR yes 525149
chr3 13087972 13087980 EHF JASPAR yes 70939800
chr3 13087983 13087993 NHLH1 JASPAR yes 525150
chr3 13087983 13087993 NHLH1 JASPAR yes 70939801
chr3 13088000 13088010 MAX JASPAR yes 525151
chr3 13088000 13088010 MAX JASPAR yes 70939802
chr3 13088000 13088012 HES5 JASPAR yes 525152
chr3 13088000 13088012 HES7 JASPAR yes 525153
chr3 13088000 13088012 HES5 JASPAR yes 70939803
chr3 13088000 13088012 HES7 JASPAR yes 70939804
chr3 13088001 13088011 CLOCK JASPAR yes 525154
chr3 13088001 13088011 HEY1 JASPAR yes 525155
chr3 13088001 13088011 HEY2 JASPAR yes 525156
chr3 13088001 13088011 MAX JASPAR yes 525157
chr3 13088001 13088011 MNT JASPAR yes 525158
chr3 13088001 13088011 CLOCK JASPAR yes 70939805
chr3 13088001 13088011 HEY1 JASPAR yes 70939806
chr3 13088001 13088011 HEY2 JASPAR yes 70939807
chr3 13088001 13088011 MAX JASPAR yes 70939808
chr3 13088001 13088011 MNT JASPAR yes 70939809
chr3 13088003 13088008 MYC TRANSFAC yes 525159
chr3 13088003 13088008 USF1 TRANSFAC yes 525160
chr3 13088003 13088008 USF2 TRANSFAC yes 525161
chr3 13088003 13088008 MYC TRANSFAC yes 70939810
chr3 13088003 13088008 USF1 TRANSFAC yes 70939811
chr3 13088003 13088008 USF2 TRANSFAC yes 70939812
chr3 13088003 13088010 USF1 JASPAR yes 525162
chr3 13088003 13088010 USF1 JASPAR yes 70939813
chr3 13088008 13088013 SP1 TRANSFAC yes 525163
chr3 13088008 13088013 SP1 TRANSFAC yes 70939814
chr3 13088027 13088031 NFE TRANSFAC yes 525164
chr3 13088027 13088031 NFE TRANSFAC yes 70939815
chr3 13088028 13088042 EBF1 JASPAR yes 525165
chr3 13088028 13088042 EBF1 JASPAR yes 70939816
chr3 13088029 13088040 EBF1 JASPAR yes 525166
chr3 13088029 13088040 EBF1 JASPAR yes 70939817
chr3 13088047 13088058 ESRRB JASPAR yes 525167
chr3 13088047 13088058 ESRRB JASPAR yes 70939818
chr3 13088085 13088095 SP1 JASPAR yes 525168
chr3 13088085 13088095 SP1 JASPAR yes 70939819
chr3 13088086 13088096 SP1 JASPAR yes 525169
chr3 13088086 13088096 SP1 JASPAR yes 70939820
chr3 13088088 13088103 STAT1 JASPAR yes 525170
chr3 13088088 13088103 STAT1 JASPAR yes 70939821
SNP sites on vista40011[chr3:13087949-13088097]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 13087970 rs182660147 T A
BHLHE40 EBF1 ESR1 ESR2 FLI1
6559548
Genes possibly regulated by vista40011[chr3:13087949-13088097]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 12938719 13114617 - IQSEC1 ENSG00000144711.9 13114617 0.71 0.99 3423 73480
Expression level of Genes
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miRNAs possibly regulated by vista40011[chr3:13087949-13088097]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results