EnhancerDB
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  3. vista40013[chr3:13111176-13111312]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40013[chr3:13111176-13111312]
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Tissue distribution of vista40013
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Transcription factor that possibly regulate vista40013[chr3:13111176-13111312]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 13111065 13111319 RUNX3 UCSC Txn Factor no Conserved 108528291
chr3 13111168 13111188 RREB1 JASPAR yes 526048
chr3 13111168 13111188 RREB1 JASPAR yes 70939853
chr3 13111177 13111197 RREB1 JASPAR yes 526049
chr3 13111177 13111197 RREB1 JASPAR yes 70939854
chr3 13111178 13111193 RUNX2 JASPAR yes 526050
chr3 13111178 13111193 RUNX2 JASPAR yes 70939855
chr3 13111179 13111189 RUNX3 JASPAR yes 526051
chr3 13111179 13111189 RUNX3 JASPAR yes 70939856
chr3 13111201 13111212 ELK4 JASPAR yes 526052
chr3 13111201 13111212 FLI1 JASPAR yes 526053
chr3 13111201 13111212 ELK4 JASPAR yes 70939857
chr3 13111201 13111212 FLI1 JASPAR yes 70939858
chr3 13111202 13111212 ELK1 JASPAR yes 526054
chr3 13111202 13111212 ELK3 JASPAR yes 526055
chr3 13111202 13111212 ERF JASPAR yes 526056
chr3 13111202 13111212 ERG JASPAR yes 526057
chr3 13111202 13111212 ETS1 JASPAR yes 526058
chr3 13111202 13111212 ETV1 JASPAR yes 526059
chr3 13111202 13111212 ETV3 JASPAR yes 526060
chr3 13111202 13111212 ETV4 JASPAR yes 526061
chr3 13111202 13111212 ETV6 JASPAR yes 526062
chr3 13111202 13111212 FEV JASPAR yes 526063
chr3 13111202 13111212 FLI1 JASPAR yes 526064
chr3 13111202 13111212 GABPA JASPAR yes 526065
chr3 13111202 13111212 ELK1 JASPAR yes 70939859
chr3 13111202 13111212 ELK3 JASPAR yes 70939860
chr3 13111202 13111212 ERF JASPAR yes 70939861
chr3 13111202 13111212 ERG JASPAR yes 70939862
chr3 13111202 13111212 ETS1 JASPAR yes 70939863
chr3 13111202 13111212 ETV1 JASPAR yes 70939864
chr3 13111202 13111212 ETV3 JASPAR yes 70939865
chr3 13111202 13111212 ETV4 JASPAR yes 70939866
chr3 13111202 13111212 ETV6 JASPAR yes 70939867
chr3 13111202 13111212 FEV JASPAR yes 70939868
chr3 13111202 13111212 FLI1 JASPAR yes 70939869
chr3 13111202 13111212 GABPA JASPAR yes 70939870
chr3 13111202 13111213 ETV2 JASPAR yes 526066
chr3 13111202 13111213 ETV2 JASPAR yes 70939871
chr3 13111202 13111214 ELF1 JASPAR yes 526067
chr3 13111202 13111214 ELF4 JASPAR yes 526068
chr3 13111202 13111214 ELF1 JASPAR yes 70939872
chr3 13111202 13111214 ELF4 JASPAR yes 70939873
chr3 13111202 13111215 ELF1 JASPAR yes 526069
chr3 13111202 13111215 ELF1 JASPAR yes 70939874
chr3 13111202 13111216 SPIC JASPAR yes 526070
chr3 13111202 13111216 SPIC JASPAR yes 70939875
chr3 13111203 13111210 SPI1 JASPAR yes 526071
chr3 13111203 13111210 SPI1 JASPAR yes 70939876
chr3 13111203 13111211 EHF JASPAR yes 526072
chr3 13111203 13111211 FEV JASPAR yes 526073
chr3 13111203 13111211 EHF JASPAR yes 70939877
chr3 13111203 13111211 FEV JASPAR yes 70939878
chr3 13111218 13111226 MEIS3 JASPAR yes 526074
chr3 13111218 13111226 MEIS3 JASPAR yes 70939879
chr3 13111219 13111239 TP63 JASPAR yes 526075
chr3 13111219 13111239 TP63 JASPAR yes 70939880
chr3 13111220 13111238 TP53 JASPAR yes 526076
chr3 13111220 13111238 TP63 JASPAR yes 526077
chr3 13111220 13111238 TP73 JASPAR yes 526078
chr3 13111220 13111238 TP53 JASPAR yes 70939881
chr3 13111220 13111238 TP63 JASPAR yes 70939882
chr3 13111220 13111238 TP73 JASPAR yes 70939883
chr3 13111221 13111231 ERF JASPAR yes 526079
chr3 13111221 13111231 ERG JASPAR yes 526080
chr3 13111221 13111231 ETS1 JASPAR yes 526081
chr3 13111221 13111231 ERF JASPAR yes 70939884
chr3 13111221 13111231 ERG JASPAR yes 70939885
chr3 13111221 13111231 ETS1 JASPAR yes 70939886
chr3 13111221 13111232 FLI1 JASPAR yes 526082
chr3 13111221 13111232 FLI1 JASPAR yes 70939887
chr3 13111222 13111229 PEA3 TRANSFAC yes 526083
chr3 13111222 13111229 PEA3 TRANSFAC yes 70939888
chr3 13111250 13111255 SP1 TRANSFAC yes 526084
chr3 13111250 13111255 SP1 TRANSFAC yes 70939889
chr3 13111265 13111280 LEF1 JASPAR yes 526085
chr3 13111265 13111280 LEF1 JASPAR yes 70939890
chr3 13111301 13111307 YY1 JASPAR yes 526086
chr3 13111301 13111307 YY1 JASPAR yes 70939891
SNP sites on vista40013[chr3:13111176-13111312]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 13111200 rs376669138 C T
RUNX3
6559684
chr3 13111253 rs138227204 G A
RUNX3 SP1
6559685
chr3 13111262 rs368936286 C T
RUNX3
6559686
Genes possibly regulated by vista40013[chr3:13111176-13111312]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 12938719 13114617 - IQSEC1 ENSG00000144711.9 13114617 0.71 0.99 3423 96695
Expression level of Genes
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miRNAs possibly regulated by vista40013[chr3:13111176-13111312]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results