EnhancerDB
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  3. vista40015[chr3:13152253-13152557]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40015[chr3:13152253-13152557]
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Tissue distribution of vista40015
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Transcription factor that possibly regulate vista40015[chr3:13152253-13152557]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 13152258 13152264 MZF1 JASPAR yes 529463
chr3 13152258 13152264 MZF1 JASPAR yes 70939906
chr3 13152291 13152302 ELK4 JASPAR yes 529464
chr3 13152291 13152302 FLI1 JASPAR yes 529465
chr3 13152291 13152302 ELK4 JASPAR yes 70939907
chr3 13152291 13152302 FLI1 JASPAR yes 70939908
chr3 13152292 13152302 ELK1 JASPAR yes 529466
chr3 13152292 13152302 ELK3 JASPAR yes 529467
chr3 13152292 13152302 ERF JASPAR yes 529468
chr3 13152292 13152302 ERG JASPAR yes 529469
chr3 13152292 13152302 ETS1 JASPAR yes 529470
chr3 13152292 13152302 ETV1 JASPAR yes 529471
chr3 13152292 13152302 ETV3 JASPAR yes 529472
chr3 13152292 13152302 ETV4 JASPAR yes 529473
chr3 13152292 13152302 ETV6 JASPAR yes 529474
chr3 13152292 13152302 FEV JASPAR yes 529475
chr3 13152292 13152302 FLI1 JASPAR yes 529476
chr3 13152292 13152302 GABPA JASPAR yes 529477
chr3 13152292 13152302 ELK1 JASPAR yes 70939909
chr3 13152292 13152302 ELK3 JASPAR yes 70939910
chr3 13152292 13152302 ERF JASPAR yes 70939911
chr3 13152292 13152302 ERG JASPAR yes 70939912
chr3 13152292 13152302 ETS1 JASPAR yes 70939913
chr3 13152292 13152302 ETV1 JASPAR yes 70939914
chr3 13152292 13152302 ETV3 JASPAR yes 70939915
chr3 13152292 13152302 ETV4 JASPAR yes 70939916
chr3 13152292 13152302 ETV6 JASPAR yes 70939917
chr3 13152292 13152302 FEV JASPAR yes 70939918
chr3 13152292 13152302 FLI1 JASPAR yes 70939919
chr3 13152292 13152302 GABPA JASPAR yes 70939920
chr3 13152292 13152303 ETV2 JASPAR yes 529478
chr3 13152292 13152303 ETV2 JASPAR yes 70939921
chr3 13152292 13152305 ELF1 JASPAR yes 529479
chr3 13152292 13152305 ELF1 JASPAR yes 70939922
chr3 13152293 13152300 SPI1 JASPAR yes 529480
chr3 13152293 13152300 SPI1 JASPAR yes 70939923
chr3 13152293 13152301 EHF JASPAR yes 529481
chr3 13152293 13152301 FEV JASPAR yes 529482
chr3 13152293 13152301 EHF JASPAR yes 70939924
chr3 13152293 13152301 FEV JASPAR yes 70939925
chr3 13152297 13152305 MEIS3 JASPAR yes 529483
chr3 13152297 13152305 MEIS3 JASPAR yes 70939926
chr3 13152298 13152302 NFE TRANSFAC yes 529484
chr3 13152298 13152302 NFE TRANSFAC yes 70939927
chr3 13152338 13152347 VENTX JASPAR yes 529485
chr3 13152338 13152347 VENTX JASPAR yes 70939928
chr3 13152338 13152348 ALX3 JASPAR yes 529486
chr3 13152338 13152348 ESX1 JASPAR yes 529487
chr3 13152338 13152348 GBX2 JASPAR yes 529488
chr3 13152338 13152348 GSX1 JASPAR yes 529489
chr3 13152338 13152348 GSX2 JASPAR yes 529490
chr3 13152338 13152348 HESX1 JASPAR yes 529491
chr3 13152338 13152348 HOXB3 JASPAR yes 529492
chr3 13152338 13152348 LBX2 JASPAR yes 529493
chr3 13152338 13152348 LHX2 JASPAR yes 529494
chr3 13152338 13152348 MIXL1 JASPAR yes 529495
chr3 13152338 13152348 MNX1 JASPAR yes 529496
chr3 13152338 13152348 RAX JASPAR yes 529497
chr3 13152338 13152348 ALX3 JASPAR yes 70939929
chr3 13152338 13152348 ESX1 JASPAR yes 70939930
chr3 13152338 13152348 GBX2 JASPAR yes 70939931
chr3 13152338 13152348 GSX1 JASPAR yes 70939932
chr3 13152338 13152348 GSX2 JASPAR yes 70939933
chr3 13152338 13152348 HESX1 JASPAR yes 70939934
chr3 13152338 13152348 HOXB3 JASPAR yes 70939935
chr3 13152338 13152348 LBX2 JASPAR yes 70939936
chr3 13152338 13152348 LHX2 JASPAR yes 70939937
chr3 13152338 13152348 MIXL1 JASPAR yes 70939938
chr3 13152338 13152348 MNX1 JASPAR yes 70939939
chr3 13152338 13152348 RAX JASPAR yes 70939940
chr3 13152339 13152343 H1TF2 TRANSFAC yes 529498
chr3 13152339 13152343 NFE TRANSFAC yes 529499
chr3 13152339 13152343 SRF TRANSFAC yes 529500
chr3 13152339 13152343 H1TF2 TRANSFAC yes 70939941
chr3 13152339 13152343 NFE TRANSFAC yes 70939942
chr3 13152339 13152343 SRF TRANSFAC yes 70939943
chr3 13152339 13152347 BARX1 JASPAR yes 529501
chr3 13152339 13152347 BSX JASPAR yes 529502
chr3 13152339 13152347 DLX6 JASPAR yes 529503
chr3 13152339 13152347 ISX JASPAR yes 529504
chr3 13152339 13152347 LBX1 JASPAR yes 529505
chr3 13152339 13152347 LHX9 JASPAR yes 529506
chr3 13152339 13152347 MSX1 JASPAR yes 529507
chr3 13152339 13152347 MSX2 JASPAR yes 529508
chr3 13152339 13152347 NKX6-2 JASPAR yes 529509
chr3 13152339 13152347 PRRX1 JASPAR yes 529510
chr3 13152339 13152347 RAX2 JASPAR yes 529511
chr3 13152339 13152347 SHOX JASPAR yes 529512
chr3 13152339 13152347 UNCX JASPAR yes 529513
chr3 13152339 13152347 BARX1 JASPAR yes 70939944
chr3 13152339 13152347 BSX JASPAR yes 70939945
chr3 13152339 13152347 DLX6 JASPAR yes 70939946
chr3 13152339 13152347 ISX JASPAR yes 70939947
chr3 13152339 13152347 LBX1 JASPAR yes 70939948
chr3 13152339 13152347 LHX9 JASPAR yes 70939949
chr3 13152339 13152347 MSX1 JASPAR yes 70939950
chr3 13152339 13152347 MSX2 JASPAR yes 70939951
chr3 13152339 13152347 NKX6-2 JASPAR yes 70939952
chr3 13152339 13152347 PRRX1 JASPAR yes 70939953
chr3 13152339 13152347 RAX2 JASPAR yes 70939954
chr3 13152339 13152347 SHOX JASPAR yes 70939955
chr3 13152339 13152347 UNCX JASPAR yes 70939956
chr3 13152339 13152349 HOXB13 JASPAR yes 529514
chr3 13152339 13152349 HOXD13 JASPAR yes 529515
chr3 13152339 13152349 HOXB13 JASPAR yes 70939957
chr3 13152339 13152349 HOXD13 JASPAR yes 70939958
chr3 13152367 13152371 NFE TRANSFAC yes 529516
chr3 13152367 13152371 NFE TRANSFAC yes 70939959
chr3 13152380 13152399 RFX2 JASPAR yes 529517
chr3 13152380 13152399 RFX2 JASPAR yes 70939960
chr3 13152399 13152417 MAFF JASPAR yes 529518
chr3 13152399 13152417 MAFF JASPAR yes 70939961
chr3 13152400 13152415 MAFK JASPAR yes 529519
chr3 13152400 13152415 MAFK JASPAR yes 70939962
chr3 13152404 13152415 NRL JASPAR yes 529520
chr3 13152404 13152415 NRL JASPAR yes 70939963
chr3 13152406 13152420 FOXF2 JASPAR yes 529521
chr3 13152406 13152420 FOXF2 JASPAR yes 70939964
chr3 13152406 13152421 FOXP1 JASPAR yes 529522
chr3 13152406 13152421 FOXP1 JASPAR yes 70939965
chr3 13152409 13152420 FOXP2 JASPAR yes 529523
chr3 13152409 13152420 FOXP2 JASPAR yes 70939966
chr3 13152411 13152418 FOXD2 JASPAR yes 529524
chr3 13152411 13152418 FOXI1 JASPAR yes 529525
chr3 13152411 13152418 FOXL1 JASPAR yes 529526
chr3 13152411 13152418 FOXO4 JASPAR yes 529527
chr3 13152411 13152418 FOXO6 JASPAR yes 529528
chr3 13152411 13152418 FOXP3 JASPAR yes 529529
chr3 13152411 13152418 FOXD2 JASPAR yes 70939967
chr3 13152411 13152418 FOXI1 JASPAR yes 70939968
chr3 13152411 13152418 FOXL1 JASPAR yes 70939969
chr3 13152411 13152418 FOXO4 JASPAR yes 70939970
chr3 13152411 13152418 FOXO6 JASPAR yes 70939971
chr3 13152411 13152418 FOXP3 JASPAR yes 70939972
chr3 13152411 13152419 FOXD1 JASPAR yes 529530
chr3 13152411 13152419 FOXG1 JASPAR yes 529531
chr3 13152411 13152419 FOXO3 JASPAR yes 529532
chr3 13152411 13152419 FOXD1 JASPAR yes 70939973
chr3 13152411 13152419 FOXG1 JASPAR yes 70939974
chr3 13152411 13152419 FOXO3 JASPAR yes 70939975
chr3 13152411 13152420 SRY JASPAR yes 529533
chr3 13152411 13152420 SRY JASPAR yes 70939976
chr3 13152413 13152422 SOX9 JASPAR yes 529534
chr3 13152413 13152422 SOX9 JASPAR yes 70939977
chr3 13152422 13152437 TFAP2A JASPAR yes 529535
chr3 13152422 13152437 TFAP2A JASPAR yes 70939978
chr3 13152424 13152439 TFAP2C JASPAR yes 529536
chr3 13152424 13152439 TFAP2C JASPAR yes 70939979
chr3 13152425 13152436 TFAP2A JASPAR yes 529537
chr3 13152425 13152436 TFAP2B JASPAR yes 529538
chr3 13152425 13152436 TFAP2C JASPAR yes 529539
chr3 13152425 13152436 TFAP2A JASPAR yes 70939980
chr3 13152425 13152436 TFAP2B JASPAR yes 70939981
chr3 13152425 13152436 TFAP2C JASPAR yes 70939982
chr3 13152425 13152437 TFAP2A JASPAR yes 529540
chr3 13152425 13152437 TFAP2B JASPAR yes 529541
chr3 13152425 13152437 TFAP2C JASPAR yes 529542
chr3 13152425 13152437 TFAP2A JASPAR yes 70939983
chr3 13152425 13152437 TFAP2B JASPAR yes 70939984
chr3 13152425 13152437 TFAP2C JASPAR yes 70939985
chr3 13152426 13152435 TFAP2A JASPAR yes 529543
chr3 13152426 13152435 TFAP2A JASPAR yes 70939986
chr3 13152431 13152444 NFKB1 JASPAR yes 529544
chr3 13152431 13152444 NFKB2 JASPAR yes 529545
chr3 13152431 13152444 NFKB1 JASPAR yes 70939987
chr3 13152431 13152444 NFKB2 JASPAR yes 70939988
chr3 13152432 13152443 NFKB1 JASPAR yes 529546
chr3 13152432 13152443 NFKB1 JASPAR yes 70939989
chr3 13152433 13152443 NFKB1 JASPAR yes 529547
chr3 13152433 13152443 REL JASPAR yes 529548
chr3 13152433 13152443 NFKB1 JASPAR yes 70939990
chr3 13152433 13152443 REL JASPAR yes 70939991
chr3 13152434 13152444 REL JASPAR yes 529549
chr3 13152434 13152444 REL JASPAR yes 70939992
chr3 13152443 13152455 TAL1 JASPAR yes 529550
chr3 13152443 13152455 TAL1 JASPAR yes 70939993
chr3 13152445 13152455 FIGLA JASPAR yes 529551
chr3 13152445 13152455 MSC JASPAR yes 529552
chr3 13152445 13152455 MYF6 JASPAR yes 529553
chr3 13152445 13152455 TFAP4 JASPAR yes 529554
chr3 13152445 13152455 FIGLA JASPAR yes 70939994
chr3 13152445 13152455 MSC JASPAR yes 70939995
chr3 13152445 13152455 MYF6 JASPAR yes 70939996
chr3 13152445 13152455 TFAP4 JASPAR yes 70939997
chr3 13152449 13152457 MEIS2 JASPAR yes 529555
chr3 13152449 13152457 MEIS3 JASPAR yes 529556
chr3 13152449 13152457 MEIS2 JASPAR yes 70939998
chr3 13152449 13152457 MEIS3 JASPAR yes 70939999
chr3 13152450 13152454 NFE TRANSFAC yes 529557
chr3 13152450 13152454 NFE TRANSFAC yes 70940000
chr3 13152454 13152464 GCM2 JASPAR yes 529558
chr3 13152454 13152464 GCM2 JASPAR yes 70940001
chr3 13152460 13152475 FOXP1 JASPAR yes 529559
chr3 13152460 13152475 FOXP1 JASPAR yes 70940002
chr3 13152482 13152503 ZNF263 JASPAR yes 529560
chr3 13152482 13152503 ZNF263 JASPAR yes 70940003
chr3 13152491 13152506 PRDM1 JASPAR yes 529561
chr3 13152491 13152506 PRDM1 JASPAR yes 70940004
chr3 13152492 13152507 NR2C2 JASPAR yes 529562
chr3 13152492 13152507 NR2C2 JASPAR yes 70940005
chr3 13152493 13152507 RXRG JASPAR yes 529563
chr3 13152493 13152507 RXRG JASPAR yes 70940006
chr3 13152526 13152533 SPIB JASPAR yes 529564
chr3 13152526 13152533 SPIB JASPAR yes 70940007
chr3 13152538 13152556 ESR1 JASPAR yes 529565
chr3 13152538 13152556 ESR1 JASPAR yes 70940008
SNP sites on vista40015[chr3:13152253-13152557]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 13152265 rs13326454 G C no 6560097
chr3 13152434 rs377389904 G A
NFKB1 NFKB2 REL TFAP2A TFAP2B TFAP2C
6560098
chr3 13152457 rs73016630 C T
GCM2 MEIS2 MEIS3
6560099
chr3 13152553 rs73016632 C T
ESR1
6560100
Genes possibly regulated by vista40015[chr3:13152253-13152557]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 12938719 13114617 - IQSEC1 ENSG00000144711.9 13114617 0.71 0.99 3423 62364
Expression level of Genes
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miRNAs possibly regulated by vista40015[chr3:13152253-13152557]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results