EnhancerDB
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  3. vista40016[chr3:13153064-13153212]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40016[chr3:13153064-13153212]
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Tissue distribution of vista40016
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Transcription factor that possibly regulate vista40016[chr3:13153064-13153212]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 13153057 13153072 AR JASPAR yes 529608
chr3 13153057 13153072 AR JASPAR yes 70940009
chr3 13153064 13153076 FOXI1 JASPAR yes 529609
chr3 13153064 13153076 FOXI1 JASPAR yes 70940010
chr3 13153075 13153080 ETS2 TRANSFAC yes 529610
chr3 13153075 13153080 ETS2 TRANSFAC yes 70940011
chr3 13153075 13153091 POU4F2 JASPAR yes 529611
chr3 13153075 13153091 POU4F2 JASPAR yes 70940012
chr3 13153103 13153106 MYB TRANSFAC yes 529612
chr3 13153103 13153106 MYB TRANSFAC yes 70940013
chr3 13153103 13153118 ZIC3 JASPAR yes 529613
chr3 13153103 13153118 ZIC3 JASPAR yes 70940014
chr3 13153109 13153113 H1TF2 TRANSFAC yes 529614
chr3 13153109 13153113 NFE TRANSFAC yes 529615
chr3 13153109 13153113 SRF TRANSFAC yes 529616
chr3 13153109 13153113 H1TF2 TRANSFAC yes 70940015
chr3 13153109 13153113 NFE TRANSFAC yes 70940016
chr3 13153109 13153113 SRF TRANSFAC yes 70940017
chr3 13153121 13153125 YY1 TRANSFAC yes 529617
chr3 13153121 13153125 YY1 TRANSFAC yes 70940018
chr3 13153124 13153134 ZNF740 JASPAR yes 529618
chr3 13153124 13153134 ZNF740 JASPAR yes 70940019
chr3 13153126 13153136 SP1 JASPAR yes 529619
chr3 13153126 13153136 SP1 JASPAR yes 70940020
chr3 13153129 13153134 SP1 TRANSFAC yes 529620
chr3 13153129 13153134 SP1 TRANSFAC yes 70940021
chr3 13153132 13153137 SP1 TRANSFAC yes 529621
chr3 13153132 13153137 SP1 TRANSFAC yes 70940022
chr3 13153156 13153171 JUND JASPAR yes 529622
chr3 13153156 13153171 JUND JASPAR yes 70940023
chr3 13153157 13153170 JUN JASPAR yes 529623
chr3 13153157 13153170 JUN JASPAR yes 70940024
chr3 13153158 13153172 ATF7 JASPAR yes 529624
chr3 13153158 13153172 ATF7 JASPAR yes 70940025
chr3 13153159 13153171 JDP2 JASPAR yes 529625
chr3 13153159 13153171 JDP2 JASPAR yes 70940026
chr3 13153159 13153174 JUND JASPAR yes 529626
chr3 13153159 13153174 JUND JASPAR yes 70940027
chr3 13153160 13153173 NR2F1 JASPAR yes 529627
chr3 13153160 13153173 NR2F1 JASPAR yes 70940028
chr3 13153161 13153169 CREB1 JASPAR yes 529628
chr3 13153161 13153169 CREB1 JASPAR yes 70940029
chr3 13153164 13153168 ESR1 TRANSFAC yes 529629
chr3 13153164 13153168 ESR1 TRANSFAC yes 70940030
chr3 13153180 13153186 MZF1 JASPAR yes 529630
chr3 13153180 13153186 MZF1 JASPAR yes 70940031
chr3 13153184 13153199 JUND JASPAR yes 529631
chr3 13153184 13153199 JUND JASPAR yes 70940032
SNP sites on vista40016[chr3:13153064-13153212]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 13153090 rs80304796 A G
POU4F2
6560102
chr3 13153113 rs114381358 A C,G
H1TF2 NFE SRF ZIC3
6560103
Genes possibly regulated by vista40016[chr3:13153064-13153212]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 12938719 13114617 - IQSEC1 ENSG00000144711.9 13114617 0.71 0.99 3423 61553
Expression level of Genes
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miRNAs possibly regulated by vista40016[chr3:13153064-13153212]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results