EnhancerDB
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  3. vista40017[chr3:13153880-13154026]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40017[chr3:13153880-13154026]
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Tissue distribution of vista40017
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Transcription factor that possibly regulate vista40017[chr3:13153880-13154026]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 13153883 13153886 MYB TRANSFAC yes 529712
chr3 13153883 13153886 MYB TRANSFAC yes 70940033
chr3 13153883 13153891 MGA JASPAR yes 529713
chr3 13153883 13153891 TBX15 JASPAR yes 529714
chr3 13153883 13153891 TBX1 JASPAR yes 529715
chr3 13153883 13153891 TBX4 JASPAR yes 529716
chr3 13153883 13153891 TBX5 JASPAR yes 529717
chr3 13153883 13153891 MGA JASPAR yes 70940034
chr3 13153883 13153891 TBX15 JASPAR yes 70940035
chr3 13153883 13153891 TBX1 JASPAR yes 70940036
chr3 13153883 13153891 TBX4 JASPAR yes 70940037
chr3 13153883 13153891 TBX5 JASPAR yes 70940038
chr3 13153883 13153895 PKNOX1 JASPAR yes 529718
chr3 13153883 13153895 PKNOX2 JASPAR yes 529719
chr3 13153883 13153895 TGIF1 JASPAR yes 529720
chr3 13153883 13153895 TGIF2 JASPAR yes 529721
chr3 13153883 13153895 PKNOX1 JASPAR yes 70940039
chr3 13153883 13153895 PKNOX2 JASPAR yes 70940040
chr3 13153883 13153895 TGIF1 JASPAR yes 70940041
chr3 13153883 13153895 TGIF2 JASPAR yes 70940042
chr3 13153884 13153894 FIGLA JASPAR yes 529722
chr3 13153884 13153894 ID4 JASPAR yes 529723
chr3 13153884 13153894 MSC JASPAR yes 529724
chr3 13153884 13153894 TCF3 JASPAR yes 529725
chr3 13153884 13153894 TCF4 JASPAR yes 529726
chr3 13153884 13153894 FIGLA JASPAR yes 70940043
chr3 13153884 13153894 ID4 JASPAR yes 70940044
chr3 13153884 13153894 MSC JASPAR yes 70940045
chr3 13153884 13153894 TCF3 JASPAR yes 70940046
chr3 13153884 13153894 TCF4 JASPAR yes 70940047
chr3 13153885 13153894 SNAI2 JASPAR yes 529727
chr3 13153885 13153894 SNAI2 JASPAR yes 70940048
chr3 13153886 13153891 USF2 TRANSFAC yes 529728
chr3 13153886 13153891 USF2 TRANSFAC yes 70940049
chr3 13153890 13153896 NFIC JASPAR yes 529729
chr3 13153890 13153896 NFIC JASPAR yes 70940050
chr3 13153896 13153909 ELF1 JASPAR yes 529730
chr3 13153896 13153909 ELF1 JASPAR yes 70940051
chr3 13153897 13153907 ELK1 JASPAR yes 529731
chr3 13153897 13153907 ELK1 JASPAR yes 70940052
chr3 13153901 13153907 ETS1 JASPAR yes 529732
chr3 13153901 13153907 SPI1 JASPAR yes 529733
chr3 13153901 13153907 ETS1 JASPAR yes 70940053
chr3 13153901 13153907 SPI1 JASPAR yes 70940054
chr3 13153915 13153931 SOX4 JASPAR yes 529734
chr3 13153915 13153931 SOX4 JASPAR yes 70940055
chr3 13153929 13153943 GLIS3 JASPAR yes 529735
chr3 13153929 13153943 GLIS3 JASPAR yes 70940056
chr3 13153966 13153981 NFYB JASPAR yes 529736
chr3 13153966 13153981 NFYB JASPAR yes 70940057
chr3 13153968 13153984 NFYA JASPAR yes 529737
chr3 13153968 13153984 NFYA JASPAR yes 70940058
chr3 13153969 13153987 NFYA JASPAR yes 529738
chr3 13153969 13153987 NFYA JASPAR yes 70940059
chr3 13153970 13153982 PBX1 JASPAR yes 529739
chr3 13153970 13153982 PBX1 JASPAR yes 70940060
chr3 13153972 13153983 FOXH1 JASPAR yes 529740
chr3 13153972 13153983 FOXH1 JASPAR yes 70940061
chr3 13153973 13153977 H1TF2 TRANSFAC yes 529741
chr3 13153973 13153977 NFE TRANSFAC yes 529742
chr3 13153973 13153977 SRF TRANSFAC yes 529743
chr3 13153973 13153977 H1TF2 TRANSFAC yes 70940062
chr3 13153973 13153977 NFE TRANSFAC yes 70940063
chr3 13153973 13153977 SRF TRANSFAC yes 70940064
chr3 13153980 13153986 SOX10 JASPAR yes 529744
chr3 13153980 13153986 SOX10 JASPAR yes 70940065
chr3 13153984 13153999 HSF1 JASPAR yes 529745
chr3 13153984 13153999 HSF1 JASPAR yes 70940066
chr3 13153993 13153999 ETS1 JASPAR yes 529746
chr3 13153993 13153999 ETS1 JASPAR yes 70940067
chr3 13154018 13154031 ELF1 JASPAR yes 529747
chr3 13154018 13154031 ELF1 JASPAR yes 70940068
chr3 13154021 13154028 ETS1 TRANSFAC yes 529748
chr3 13154021 13154028 ETS1 TRANSFAC yes 70940069
chr3 13154021 13154031 GABPA JASPAR yes 529749
chr3 13154021 13154031 GABPA JASPAR yes 70940070
SNP sites on vista40017[chr3:13153880-13154026]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 13153945 rs141620662 C T no 6560113
chr3 13153963 rs185156897 G A no 6560114
Genes possibly regulated by vista40017[chr3:13153880-13154026]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 12938719 13114617 - IQSEC1 ENSG00000144711.9 13114617 0.71 0.99 3423 60737
Expression level of Genes
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miRNAs possibly regulated by vista40017[chr3:13153880-13154026]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results