EnhancerDB
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  3. vista40022[chr3:13325256-13325344]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40022[chr3:13325256-13325344]
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Tissue distribution of vista40022
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Transcription factor that possibly regulate vista40022[chr3:13325256-13325344]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 13324639 13325409 CTCF UCSC Txn Factor no Conserved 108528295
chr3 13325139 13325417 RAD21 UCSC Txn Factor no Conserved 108528296
chr3 13325260 13325278 MAFF JASPAR yes 540480
chr3 13325260 13325278 MAFF JASPAR yes 70940216
chr3 13325262 13325266 YY1 TRANSFAC yes 540481
chr3 13325262 13325266 YY1 TRANSFAC yes 70940217
chr3 13325262 13325273 FOXA1 JASPAR yes 540482
chr3 13325262 13325273 NRL JASPAR yes 540483
chr3 13325262 13325273 FOXA1 JASPAR yes 70940218
chr3 13325262 13325273 NRL JASPAR yes 70940219
chr3 13325262 13325277 MAFK JASPAR yes 540484
chr3 13325262 13325277 MAFK JASPAR yes 70940220
chr3 13325274 13325280 NFIC JASPAR yes 540485
chr3 13325274 13325280 NFIC JASPAR yes 70940221
chr3 13325286 13325291 SP1 TRANSFAC yes 540486
chr3 13325286 13325291 SP1 TRANSFAC yes 70940222
chr3 13325289 13325309 RREB1 JASPAR yes 540487
chr3 13325289 13325309 RREB1 JASPAR yes 70940223
chr3 13325303 13325311 MGA JASPAR yes 540488
chr3 13325303 13325311 TBX15 JASPAR yes 540489
chr3 13325303 13325311 TBX1 JASPAR yes 540490
chr3 13325303 13325311 TBX4 JASPAR yes 540491
chr3 13325303 13325311 TBX5 JASPAR yes 540492
chr3 13325303 13325311 MGA JASPAR yes 70940224
chr3 13325303 13325311 TBX15 JASPAR yes 70940225
chr3 13325303 13325311 TBX1 JASPAR yes 70940226
chr3 13325303 13325311 TBX4 JASPAR yes 70940227
chr3 13325303 13325311 TBX5 JASPAR yes 70940228
chr3 13325306 13325316 ERF JASPAR yes 540493
chr3 13325306 13325316 ERF JASPAR yes 70940229
chr3 13325313 13325318 SP1 TRANSFAC yes 540494
chr3 13325313 13325318 SP1 TRANSFAC yes 70940230
chr3 13325315 13325320 TFAP2A TRANSFAC yes 540495
chr3 13325315 13325320 TFAP2A TRANSFAC yes 70940231
chr3 13325315 13325321 MZF1 JASPAR yes 540496
chr3 13325315 13325321 MZF1 JASPAR yes 70940232
chr3 13325333 13325344 E2F6 JASPAR yes 540497
chr3 13325333 13325344 E2F6 JASPAR yes 70940233
chr3 13325336 13325347 NFKB1 JASPAR yes 540498
chr3 13325336 13325347 NFKB1 JASPAR yes 70940234
chr3 13325337 13325342 ETS2 TRANSFAC yes 540499
chr3 13325337 13325342 ETS2 TRANSFAC yes 70940235
chr3 13325337 13325347 NFKB1 JASPAR yes 540500
chr3 13325337 13325347 RELA JASPAR yes 540501
chr3 13325337 13325347 NFKB1 JASPAR yes 70940236
chr3 13325337 13325347 RELA JASPAR yes 70940237
chr3 13325337 13325348 NFKB1 JASPAR yes 540502
chr3 13325337 13325348 NFKB1 JASPAR yes 70940238
chr3 13325343 13325349 SP1 TRANSFAC yes 540503
chr3 13325343 13325349 SP1 TRANSFAC yes 70940239
chr3 13325343 13325353 SP1 JASPAR yes 540504
chr3 13325343 13325353 SP1 JASPAR yes 70940240
SNP sites on vista40022[chr3:13325256-13325344]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 13325267 rs114429151 T C
CTCF FOXA1 MAFF MAFK NRL RAD21
6561410
Genes possibly regulated by vista40022[chr3:13325256-13325344]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista40022[chr3:13325256-13325344]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results