EnhancerDB
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  3. vista40026[chr3:13460446-13460799]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40026[chr3:13460446-13460799]
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Tissue distribution of vista40026
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Transcription factor that possibly regulate vista40026[chr3:13460446-13460799]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 13460396 13462306 MAX UCSC Txn Factor no Conserved 108528299
chr3 13460397 13462169 MYC UCSC Txn Factor no Conserved 108528300
chr3 13460414 13462994 POLR2A UCSC Txn Factor no Conserved 108528301
chr3 13460450 13462032 E2F6 UCSC Txn Factor no Conserved 108528302
chr3 13460455 13460746 USF2 UCSC Txn Factor no Conserved 108528303
chr3 13460464 13460734 USF1 UCSC Txn Factor no Conserved 108528304
chr3 13460446 13460461 FOXP1 JASPAR yes 70940383
chr3 13460447 13460462 FOXP1 JASPAR yes 70940384
chr3 13460447 13460468 IRF1 JASPAR yes 70940385
chr3 13460448 13460463 FOXP1 JASPAR yes 70940386
chr3 13460448 13460469 IRF1 JASPAR yes 70940387
chr3 13460449 13460464 FOXP1 JASPAR yes 70940388
chr3 13460449 13460470 IRF1 JASPAR yes 70940389
chr3 13460450 13460465 FOXP1 JASPAR yes 70940390
chr3 13460450 13460471 IRF1 JASPAR yes 70940391
chr3 13460451 13460466 FOXP1 JASPAR yes 70940392
chr3 13460451 13460472 IRF1 JASPAR yes 70940393
chr3 13460452 13460467 FOXP1 JASPAR yes 70940394
chr3 13460452 13460473 IRF1 JASPAR yes 70940395
chr3 13460453 13460468 FOXP1 JASPAR yes 70940396
chr3 13460453 13460474 IRF1 JASPAR yes 70940397
chr3 13460454 13460469 FOXP1 JASPAR yes 70940398
chr3 13460454 13460475 IRF1 JASPAR yes 70940399
chr3 13460455 13460470 FOXP1 JASPAR yes 70940400
chr3 13460455 13460476 IRF1 JASPAR yes 70940401
chr3 13460456 13460471 FOXP1 JASPAR yes 70940402
chr3 13460456 13460477 IRF1 JASPAR yes 70940403
chr3 13460457 13460472 FOXP1 JASPAR yes 70940404
chr3 13460457 13460478 IRF1 JASPAR yes 70940405
chr3 13460458 13460473 FOXP1 JASPAR yes 70940406
chr3 13460458 13460479 IRF1 JASPAR yes 70940407
chr3 13460459 13460474 FOXP1 JASPAR yes 70940408
chr3 13460461 13460476 FOXP1 JASPAR yes 70940409
chr3 13460462 13460483 IRF1 JASPAR yes 70940410
chr3 13460463 13460478 FOXP1 JASPAR yes 70940411
chr3 13460466 13460480 SPIC JASPAR yes 70940412
chr3 13460466 13460480 STAT1 JASPAR yes 70940413
chr3 13460466 13460481 PRDM1 JASPAR yes 70940414
chr3 13460466 13460481 STAT2 JASPAR yes 70940415
chr3 13460466 13460487 IRF1 JASPAR yes 70940416
chr3 13460486 13460504 RARA JASPAR yes 70940417
chr3 13460487 13460491 LFA1 TRANSFAC yes 70940418
chr3 13460503 13460518 PRDM1 JASPAR yes 70940419
chr3 13460527 13460538 TFAP2A JASPAR yes 70940420
chr3 13460527 13460538 TFAP2C JASPAR yes 70940421
chr3 13460533 13460537 LFA1 TRANSFAC yes 70940422
chr3 13460536 13460547 TBX20 JASPAR yes 70940423
chr3 13460537 13460547 TBX21 JASPAR yes 70940424
chr3 13460538 13460546 MGA JASPAR yes 70940425
chr3 13460538 13460546 TBX15 JASPAR yes 70940426
chr3 13460538 13460546 TBX1 JASPAR yes 70940427
chr3 13460538 13460546 TBX4 JASPAR yes 70940428
chr3 13460538 13460546 TBX5 JASPAR yes 70940429
chr3 13460583 13460603 TP53 JASPAR yes 70940430
chr3 13460585 13460605 TP63 JASPAR yes 70940431
chr3 13460586 13460604 TP53 JASPAR yes 70940432
chr3 13460587 13460602 TP53 JASPAR yes 70940433
chr3 13460588 13460603 TP53 JASPAR yes 70940434
chr3 13460599 13460619 TBX19 JASPAR yes 70940435
chr3 13460601 13460611 MAX JASPAR yes 70940436
chr3 13460601 13460617 T JASPAR yes 70940437
chr3 13460607 13460620 SMAD2 JASPAR yes 70940438
chr3 13460610 13460618 MEIS2 JASPAR yes 70940439
chr3 13460610 13460618 MEIS3 JASPAR yes 70940440
chr3 13460611 13460615 NFE TRANSFAC yes 70940441
chr3 13460612 13460622 MAX JASPAR yes 70940442
chr3 13460612 13460623 USF1 JASPAR yes 70940443
chr3 13460612 13460623 USF2 JASPAR yes 70940444
chr3 13460613 13460623 BHLHE40 JASPAR yes 70940445
chr3 13460613 13460623 BHLHE41 JASPAR yes 70940446
chr3 13460613 13460623 MAX JASPAR yes 70940447
chr3 13460613 13460623 MLXIPL JASPAR yes 70940448
chr3 13460613 13460623 MLX JASPAR yes 70940449
chr3 13460613 13460623 MNT JASPAR yes 70940450
chr3 13460613 13460623 SREBF2 JASPAR yes 70940451
chr3 13460613 13460623 TFE3 JASPAR yes 70940452
chr3 13460613 13460623 TFEB JASPAR yes 70940453
chr3 13460613 13460623 TFEC JASPAR yes 70940454
chr3 13460613 13460624 USF1 JASPAR yes 70940455
chr3 13460613 13460624 USF2 JASPAR yes 70940456
chr3 13460614 13460624 MAX JASPAR yes 70940457
chr3 13460615 13460620 MYC TRANSFAC yes 70940458
chr3 13460615 13460620 USF1 TRANSFAC yes 70940459
chr3 13460615 13460620 USF2 TRANSFAC yes 70940460
chr3 13460615 13460622 USF1 JASPAR yes 70940461
chr3 13460618 13460631 EOMES JASPAR yes 70940462
chr3 13460620 13460624 ESR1 TRANSFAC yes 70940463
chr3 13460622 13460630 MGA JASPAR yes 70940464
chr3 13460622 13460630 TBX15 JASPAR yes 70940465
chr3 13460622 13460630 TBX1 JASPAR yes 70940466
chr3 13460622 13460630 TBX4 JASPAR yes 70940467
chr3 13460622 13460630 TBX5 JASPAR yes 70940468
chr3 13460639 13460653 RXRB JASPAR yes 70940469
chr3 13460639 13460653 RXRG JASPAR yes 70940470
chr3 13460639 13460654 NR2C2 JASPAR yes 70940471
chr3 13460645 13460659 RORA JASPAR yes 70940472
chr3 13460653 13460674 IRF1 JASPAR yes 70940473
chr3 13460656 13460670 IRF8 JASPAR yes 70940474
chr3 13460694 13460715 ZNF263 JASPAR yes 70940475
chr3 13460696 13460707 E2F6 JASPAR yes 70940476
chr3 13460697 13460702 SP1 TRANSFAC yes 70940477
chr3 13460698 13460708 SP1 JASPAR yes 70940478
chr3 13460700 13460705 ETS2 TRANSFAC yes 70940479
chr3 13460704 13460710 SP1 TRANSFAC yes 70940480
chr3 13460705 13460710 SP1 TRANSFAC yes 70940481
chr3 13460706 13460717 ELK4 JASPAR yes 70940482
chr3 13460708 13460714 ETS1 JASPAR yes 70940483
chr3 13460708 13460714 SPI1 JASPAR yes 70940484
chr3 13460721 13460732 TBX20 JASPAR yes 70940485
chr3 13460745 13460750 ETS2 TRANSFAC yes 70940486
chr3 13460767 13460776 HIC2 JASPAR yes 70940487
chr3 13460781 13460796 TFAP2C JASPAR yes 70940488
chr3 13460782 13460794 INSM1 JASPAR yes 70940489
chr3 13460788 13460792 LFA1 TRANSFAC yes 70940490
SNP sites on vista40026[chr3:13460446-13460799]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 13460448 rs112826426 CAAAAAAAAAAAA C
FOXP1 IRF1 MAX MYC POLR2A
6562180
chr3 13460610 rs559651509 G A
E2F6 MAX MEIS2 MEIS3 MYC POLR2A SMAD2 T TBX19 USF1 USF2
6562181
chr3 13460661 rs368424135 AACAGAAATAAAG A
E2F6 IRF1 IRF8 MAX MYC POLR2A USF1 USF2
6562182
chr3 13460730 rs76743769 C A,T
E2F6 MAX MYC POLR2A TBX20 USF1 USF2
6562183
chr3 13460776 rs142918555 G A
E2F6 HIC2 MAX MYC POLR2A
6562184
Genes possibly regulated by vista40026[chr3:13460446-13460799]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 13357737 13461809 - NUP210 ENSG00000132182.7 13461809 0.82 1.0 3424 98990
chr3 13521224 13547916 + HDAC11 ENSG00000163517.10 13521224 0.68 1.0 3425 39575
Expression level of Genes
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miRNAs possibly regulated by vista40026[chr3:13460446-13460799]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results