EnhancerDB
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  3. vista40031[chr3:13555033-13555410]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40031[chr3:13555033-13555410]
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Tissue distribution of vista40031
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Transcription factor that possibly regulate vista40031[chr3:13555033-13555410]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 13555018 13555036 MAFF JASPAR yes 553572
chr3 13555018 13555036 MAFF JASPAR yes 70940738
chr3 13555020 13555041 MAFG JASPAR yes 553573
chr3 13555020 13555041 MAFG JASPAR yes 70940739
chr3 13555051 13555072 IRF1 JASPAR yes 553574
chr3 13555051 13555072 IRF1 JASPAR yes 70940740
chr3 13555053 13555068 STAT2 JASPAR yes 553575
chr3 13555053 13555068 STAT2 JASPAR yes 70940741
chr3 13555054 13555068 STAT1 JASPAR yes 553576
chr3 13555054 13555068 STAT1 JASPAR yes 70940742
chr3 13555060 13555064 YY1 TRANSFAC yes 553577
chr3 13555060 13555064 YY1 TRANSFAC yes 70940743
chr3 13555077 13555089 TEAD1 JASPAR yes 553578
chr3 13555077 13555089 TEAD1 JASPAR yes 70940744
chr3 13555079 13555089 TEAD1 JASPAR yes 553579
chr3 13555079 13555089 TEAD4 JASPAR yes 553580
chr3 13555079 13555089 TEAD1 JASPAR yes 70940745
chr3 13555079 13555089 TEAD4 JASPAR yes 70940746
chr3 13555080 13555088 TEAD3 JASPAR yes 553581
chr3 13555080 13555088 TEAD3 JASPAR yes 70940747
chr3 13555109 13555114 SP1 TRANSFAC yes 553582
chr3 13555109 13555114 SP1 TRANSFAC yes 70940748
chr3 13555129 13555134 ETS2 TRANSFAC yes 553583
chr3 13555129 13555134 ETS2 TRANSFAC yes 70940749
chr3 13555134 13555148 CREB3 JASPAR yes 553584
chr3 13555134 13555148 CREB3L1 JASPAR yes 553585
chr3 13555134 13555148 CREB3 JASPAR yes 70940750
chr3 13555134 13555148 CREB3L1 JASPAR yes 70940751
chr3 13555135 13555139 ESR1 TRANSFAC yes 553586
chr3 13555135 13555139 ESR1 TRANSFAC yes 70940752
chr3 13555135 13555145 MAX JASPAR yes 553587
chr3 13555135 13555145 MAX JASPAR yes 70940753
chr3 13555135 13555146 USF1 JASPAR yes 553588
chr3 13555135 13555146 USF2 JASPAR yes 553589
chr3 13555135 13555146 USF1 JASPAR yes 70940754
chr3 13555135 13555146 USF2 JASPAR yes 70940755
chr3 13555135 13555147 HES7 JASPAR yes 553590
chr3 13555135 13555147 HES7 JASPAR yes 70940756
chr3 13555135 13555149 XBP1 JASPAR yes 553591
chr3 13555135 13555149 XBP1 JASPAR yes 70940757
chr3 13555136 13555146 BHLHE40 JASPAR yes 553592
chr3 13555136 13555146 BHLHE41 JASPAR yes 553593
chr3 13555136 13555146 HEY1 JASPAR yes 553594
chr3 13555136 13555146 HEY2 JASPAR yes 553595
chr3 13555136 13555146 MLXIPL JASPAR yes 553596
chr3 13555136 13555146 MLX JASPAR yes 553597
chr3 13555136 13555146 MNT JASPAR yes 553598
chr3 13555136 13555146 SREBF2 JASPAR yes 553599
chr3 13555136 13555146 TFE3 JASPAR yes 553600
chr3 13555136 13555146 TFEB JASPAR yes 553601
chr3 13555136 13555146 TFEC JASPAR yes 553602
chr3 13555136 13555146 BHLHE40 JASPAR yes 70940758
chr3 13555136 13555146 BHLHE41 JASPAR yes 70940759
chr3 13555136 13555146 HEY1 JASPAR yes 70940760
chr3 13555136 13555146 HEY2 JASPAR yes 70940761
chr3 13555136 13555146 MLXIPL JASPAR yes 70940762
chr3 13555136 13555146 MLX JASPAR yes 70940763
chr3 13555136 13555146 MNT JASPAR yes 70940764
chr3 13555136 13555146 SREBF2 JASPAR yes 70940765
chr3 13555136 13555146 TFE3 JASPAR yes 70940766
chr3 13555136 13555146 TFEB JASPAR yes 70940767
chr3 13555136 13555146 TFEC JASPAR yes 70940768
chr3 13555137 13555147 MAX JASPAR yes 553603
chr3 13555137 13555147 MAX JASPAR yes 70940769
chr3 13555138 13555143 MYC TRANSFAC yes 553604
chr3 13555138 13555143 USF1 TRANSFAC yes 553605
chr3 13555138 13555143 USF2 TRANSFAC yes 553606
chr3 13555138 13555143 MYC TRANSFAC yes 70940770
chr3 13555138 13555143 USF1 TRANSFAC yes 70940771
chr3 13555138 13555143 USF2 TRANSFAC yes 70940772
chr3 13555161 13555167 TBP TRANSFAC yes 553607
chr3 13555161 13555167 TBP TRANSFAC yes 70940773
chr3 13555175 13555190 NR2C2 JASPAR yes 553608
chr3 13555175 13555190 NR2C2 JASPAR yes 70940774
chr3 13555177 13555198 ZNF263 JASPAR yes 553609
chr3 13555177 13555198 ZNF263 JASPAR yes 70940775
chr3 13555182 13555196 PLAG1 JASPAR yes 553610
chr3 13555182 13555196 PLAG1 JASPAR yes 70940776
chr3 13555192 13555198 MZF1 JASPAR yes 553611
chr3 13555192 13555198 MZF1 JASPAR yes 70940777
chr3 13555195 13555199 H1TF2 TRANSFAC yes 553612
chr3 13555195 13555199 NFE TRANSFAC yes 553613
chr3 13555195 13555199 SRF TRANSFAC yes 553614
chr3 13555195 13555199 H1TF2 TRANSFAC yes 70940778
chr3 13555195 13555199 NFE TRANSFAC yes 70940779
chr3 13555195 13555199 SRF TRANSFAC yes 70940780
chr3 13555207 13555211 H4TF2 TRANSFAC yes 553615
chr3 13555207 13555211 H4TF2 TRANSFAC yes 70940781
chr3 13555222 13555226 YY1 TRANSFAC yes 553616
chr3 13555222 13555226 YY1 TRANSFAC yes 70940782
chr3 13555240 13555250 ZNF740 JASPAR yes 553617
chr3 13555240 13555250 ZNF740 JASPAR yes 70940783
chr3 13555241 13555246 TFAP2A TRANSFAC yes 553618
chr3 13555241 13555246 TFAP2A TRANSFAC yes 70940784
chr3 13555241 13555247 MZF1 JASPAR yes 553619
chr3 13555241 13555247 MZF1 JASPAR yes 70940785
chr3 13555243 13555249 MAZ TRANSFAC yes 553620
chr3 13555243 13555249 MAZ TRANSFAC yes 70940786
chr3 13555247 13555251 LFA1 TRANSFAC yes 553621
chr3 13555247 13555251 LFA1 TRANSFAC yes 70940787
chr3 13555263 13555268 SP1 TRANSFAC yes 553622
chr3 13555263 13555268 SP1 TRANSFAC yes 70940788
chr3 13555265 13555283 ESR1 JASPAR yes 553623
chr3 13555265 13555283 ESR1 JASPAR yes 70940789
chr3 13555266 13555283 PAX9 JASPAR yes 553624
chr3 13555266 13555283 PAX9 JASPAR yes 70940790
chr3 13555301 13555322 REST JASPAR yes 553625
chr3 13555301 13555322 REST JASPAR yes 70940791
chr3 13555302 13555321 REST JASPAR yes 553626
chr3 13555302 13555321 REST JASPAR yes 70940792
chr3 13555318 13555323 TFAP2A TRANSFAC yes 553627
chr3 13555318 13555323 TFAP2A TRANSFAC yes 70940793
chr3 13555318 13555324 MZF1 JASPAR yes 553628
chr3 13555318 13555324 MZF1 JASPAR yes 70940794
chr3 13555324 13555335 NFKB1 JASPAR yes 553629
chr3 13555324 13555335 NFKB1 JASPAR yes 70940795
chr3 13555339 13555349 TEAD1 JASPAR yes 553630
chr3 13555339 13555349 TEAD4 JASPAR yes 553631
chr3 13555339 13555349 TEAD1 JASPAR yes 70940796
chr3 13555339 13555349 TEAD4 JASPAR yes 70940797
chr3 13555340 13555348 TEAD3 JASPAR yes 553632
chr3 13555340 13555348 TEAD3 JASPAR yes 70940798
chr3 13555353 13555373 RREB1 JASPAR yes 553633
chr3 13555353 13555373 RREB1 JASPAR yes 70940799
chr3 13555383 13555394 STAT3 JASPAR yes 553634
chr3 13555383 13555394 STAT3 JASPAR yes 70940800
chr3 13555404 13555418 RORA JASPAR yes 553635
chr3 13555404 13555418 RORA JASPAR yes 70940801
chr3 13555407 13555427 PPARG JASPAR yes 553636
chr3 13555407 13555427 PPARG JASPAR yes 70940802
SNP sites on vista40031[chr3:13555033-13555410]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 13555297 rs4684940 C T no 6562829
chr3 13555324 rs142373511 A T
MZF1 NFKB1
6562830
chr3 13555354 rs75869900 G A
RREB1
6562831
Genes possibly regulated by vista40031[chr3:13555033-13555410]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 13357737 13461809 - NUP210 ENSG00000132182.7 13461809 0.82 1.0 3424 6776
chr3 13521224 13547916 + HDAC11 ENSG00000163517.10 13521224 0.68 1.0 3425 66191
chr3 13573824 13679922 + FBLN2 ENSG00000163520.9 13573824 0.83 0.99 3426 81586
Expression level of Genes
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miRNAs possibly regulated by vista40031[chr3:13555033-13555410]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results