EnhancerDB
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  3. vista40032[chr3:13555627-13555924]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40032[chr3:13555627-13555924]
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Tissue distribution of vista40032
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Transcription factor that possibly regulate vista40032[chr3:13555627-13555924]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 13555632 13555636 H4TF2 TRANSFAC yes 553665
chr3 13555632 13555636 H4TF2 TRANSFAC yes 70940803
chr3 13555633 13555645 NHLH1 JASPAR yes 553666
chr3 13555633 13555645 NHLH1 JASPAR yes 70940804
chr3 13555634 13555644 MSC JASPAR yes 553667
chr3 13555634 13555644 MSC JASPAR yes 70940805
chr3 13555658 13555663 SP1 TRANSFAC yes 553668
chr3 13555658 13555663 SP1 TRANSFAC yes 70940806
chr3 13555658 13555665 SP1 TRANSFAC yes 553669
chr3 13555658 13555665 SP1 TRANSFAC yes 70940807
chr3 13555694 13555706 IRF1 JASPAR yes 553670
chr3 13555694 13555706 IRF1 JASPAR yes 70940808
chr3 13555711 13555718 SPIB JASPAR yes 553671
chr3 13555711 13555718 SPIB JASPAR yes 70940809
chr3 13555713 13555732 REST JASPAR yes 553672
chr3 13555713 13555732 REST JASPAR yes 70940810
chr3 13555726 13555738 TFAP2A JASPAR yes 553673
chr3 13555726 13555738 TFAP2B JASPAR yes 553674
chr3 13555726 13555738 TFAP2C JASPAR yes 553675
chr3 13555726 13555738 TFAP2A JASPAR yes 70940811
chr3 13555726 13555738 TFAP2B JASPAR yes 70940812
chr3 13555726 13555738 TFAP2C JASPAR yes 70940813
chr3 13555726 13555741 TFAP2A JASPAR yes 553676
chr3 13555726 13555741 TFAP2C JASPAR yes 553677
chr3 13555726 13555741 TFAP2A JASPAR yes 70940814
chr3 13555726 13555741 TFAP2C JASPAR yes 70940815
chr3 13555732 13555742 SP1 JASPAR yes 553678
chr3 13555732 13555742 SP1 JASPAR yes 70940816
chr3 13555765 13555775 NFIA JASPAR yes 553679
chr3 13555765 13555775 NFIA JASPAR yes 70940817
chr3 13555767 13555773 NFIC JASPAR yes 553680
chr3 13555767 13555773 NFIC JASPAR yes 70940818
chr3 13555768 13555780 PKNOX2 JASPAR yes 553681
chr3 13555768 13555780 PKNOX2 JASPAR yes 70940819
chr3 13555769 13555779 NHLH1 JASPAR yes 553682
chr3 13555769 13555779 NHLH1 JASPAR yes 70940820
chr3 13555785 13555800 TFAP2A JASPAR yes 553683
chr3 13555785 13555800 TFAP2A JASPAR yes 70940821
chr3 13555787 13555802 TFAP2A JASPAR yes 553684
chr3 13555787 13555802 TFAP2C JASPAR yes 553685
chr3 13555787 13555802 TFAP2A JASPAR yes 70940822
chr3 13555787 13555802 TFAP2C JASPAR yes 70940823
chr3 13555788 13555799 TFAP2A JASPAR yes 553686
chr3 13555788 13555799 TFAP2B JASPAR yes 553687
chr3 13555788 13555799 TFAP2C JASPAR yes 553688
chr3 13555788 13555799 TFAP2A JASPAR yes 70940824
chr3 13555788 13555799 TFAP2B JASPAR yes 70940825
chr3 13555788 13555799 TFAP2C JASPAR yes 70940826
chr3 13555788 13555800 INSM1 JASPAR yes 553689
chr3 13555788 13555800 TFAP2A JASPAR yes 553690
chr3 13555788 13555800 TFAP2B JASPAR yes 553691
chr3 13555788 13555800 TFAP2C JASPAR yes 553692
chr3 13555788 13555800 INSM1 JASPAR yes 70940827
chr3 13555788 13555800 TFAP2A JASPAR yes 70940828
chr3 13555788 13555800 TFAP2B JASPAR yes 70940829
chr3 13555788 13555800 TFAP2C JASPAR yes 70940830
chr3 13555789 13555798 TFAP2A JASPAR yes 553693
chr3 13555789 13555798 TFAP2A JASPAR yes 70940831
chr3 13555793 13555798 SP1 TRANSFAC yes 553694
chr3 13555793 13555798 SP1 TRANSFAC yes 70940832
chr3 13555793 13555808 ESR2 JASPAR yes 553695
chr3 13555793 13555808 ESR2 JASPAR yes 70940833
chr3 13555796 13555807 USF1 JASPAR yes 553696
chr3 13555796 13555807 USF2 JASPAR yes 553697
chr3 13555796 13555807 USF1 JASPAR yes 70940834
chr3 13555796 13555807 USF2 JASPAR yes 70940835
chr3 13555816 13555827 STAT1 JASPAR yes 553698
chr3 13555816 13555827 STAT3 JASPAR yes 553699
chr3 13555816 13555827 STAT1 JASPAR yes 70940836
chr3 13555816 13555827 STAT3 JASPAR yes 70940837
chr3 13555817 13555822 ETS2 TRANSFAC yes 553700
chr3 13555817 13555822 ETS2 TRANSFAC yes 70940838
chr3 13555830 13555849 REST JASPAR yes 553701
chr3 13555830 13555849 REST JASPAR yes 70940839
chr3 13555836 13555842 MZF1 JASPAR yes 553702
chr3 13555836 13555842 MZF1 JASPAR yes 70940840
chr3 13555851 13555871 ESR1 JASPAR yes 553703
chr3 13555851 13555871 ESR1 JASPAR yes 70940841
chr3 13555853 13555869 SOX4 JASPAR yes 553704
chr3 13555853 13555869 SOX4 JASPAR yes 70940842
chr3 13555854 13555872 ESR1 JASPAR yes 553705
chr3 13555854 13555872 ESR2 JASPAR yes 553706
chr3 13555854 13555872 ESR1 JASPAR yes 70940843
chr3 13555854 13555872 ESR2 JASPAR yes 70940844
chr3 13555856 13555871 ESR2 JASPAR yes 553707
chr3 13555856 13555871 ESR2 JASPAR yes 70940845
chr3 13555856 13555876 ESR1 JASPAR yes 553708
chr3 13555856 13555876 ESR1 JASPAR yes 70940846
chr3 13555867 13555877 SP1 JASPAR yes 553709
chr3 13555867 13555877 SP1 JASPAR yes 70940847
chr3 13555888 13555900 INSM1 JASPAR yes 553710
chr3 13555888 13555900 INSM1 JASPAR yes 70940848
chr3 13555893 13555903 SP1 JASPAR yes 553711
chr3 13555893 13555903 SP1 JASPAR yes 70940849
SNP sites on vista40032[chr3:13555627-13555924]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 13555665 rs2655226 G A
SP1
6562835
chr3 13555748 rs374783299 C T no 6562836
chr3 13555752 rs569777415 C T no 6562837
chr3 13555811 rs76612890 T G no 6562838
chr3 13555836 rs2597513 C T
MZF1 REST
6562839
Genes possibly regulated by vista40032[chr3:13555627-13555924]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 13357737 13461809 - NUP210 ENSG00000132182.7 13461809 0.82 1.0 3424 6182
chr3 13521224 13547916 + HDAC11 ENSG00000163517.10 13521224 0.68 1.0 3425 65597
chr3 13573824 13679922 + FBLN2 ENSG00000163520.9 13573824 0.83 0.99 3426 82100
Expression level of Genes
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miRNAs possibly regulated by vista40032[chr3:13555627-13555924]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results