EnhancerDB
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  3. vista40033[chr3:13575229-13575656]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40033[chr3:13575229-13575656]
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Tissue distribution of vista40033
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Transcription factor that possibly regulate vista40033[chr3:13575229-13575656]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 13575374 13575655 TFAP2C UCSC Txn Factor no Conserved 108528329
chr3 13575388 13575676 CEBPB UCSC Txn Factor no Conserved 108528330
chr3 13575223 13575233 TEAD1 JASPAR yes 555232
chr3 13575223 13575233 TEAD1 JASPAR yes 70940850
chr3 13575237 13575242 ETS2 TRANSFAC yes 555233
chr3 13575237 13575242 ETS2 TRANSFAC yes 70940851
chr3 13575247 13575265 RARA JASPAR yes 555234
chr3 13575247 13575265 RARA JASPAR yes 70940852
chr3 13575253 13575257 YY1 TRANSFAC yes 555235
chr3 13575253 13575257 YY1 TRANSFAC yes 70940853
chr3 13575267 13575272 H4TF1 TRANSFAC yes 555236
chr3 13575267 13575272 H4TF1 TRANSFAC yes 70940854
chr3 13575269 13575285 SRF JASPAR yes 555237
chr3 13575269 13575285 SRF JASPAR yes 70940855
chr3 13575298 13575301 MYB TRANSFAC yes 555238
chr3 13575298 13575301 MYB TRANSFAC yes 70940856
chr3 13575320 13575335 TFAP2A JASPAR yes 555239
chr3 13575320 13575335 TFAP2A JASPAR yes 70940857
chr3 13575327 13575331 LFA1 TRANSFAC yes 555240
chr3 13575327 13575331 LFA1 TRANSFAC yes 70940858
chr3 13575353 13575357 YY1 TRANSFAC yes 555241
chr3 13575353 13575357 YY1 TRANSFAC yes 70940859
chr3 13575365 13575370 GATA2 JASPAR yes 555242
chr3 13575365 13575370 GATA2 JASPAR yes 70940860
chr3 13575366 13575382 ZNF143 JASPAR yes 555243
chr3 13575366 13575382 ZNF143 JASPAR yes 70940861
chr3 13575384 13575395 TBX20 JASPAR yes 555244
chr3 13575384 13575395 TBX20 JASPAR yes 70940862
chr3 13575390 13575411 ZNF263 JASPAR yes 555245
chr3 13575390 13575411 ZNF263 JASPAR yes 70940863
chr3 13575391 13575412 ZNF263 JASPAR yes 555246
chr3 13575391 13575412 ZNF263 JASPAR yes 70940864
chr3 13575392 13575407 PRDM1 JASPAR yes 555247
chr3 13575392 13575407 PRDM1 JASPAR yes 70940865
chr3 13575399 13575413 SPI1 JASPAR yes 555248
chr3 13575399 13575413 SPI1 JASPAR yes 70940866
chr3 13575400 13575413 ELF1 JASPAR yes 555249
chr3 13575400 13575413 ELF1 JASPAR yes 70940867
chr3 13575403 13575409 PEA3 TRANSFAC yes 555250
chr3 13575403 13575409 PEA3 TRANSFAC yes 70940868
chr3 13575414 13575420 SOX10 JASPAR yes 555251
chr3 13575414 13575420 SOX10 JASPAR yes 70940869
chr3 13575440 13575445 SP1 TRANSFAC yes 555252
chr3 13575440 13575445 SP1 TRANSFAC yes 70940870
chr3 13575486 13575501 TFAP2A JASPAR yes 555253
chr3 13575486 13575501 TFAP2A JASPAR yes 70940871
chr3 13575499 13575509 TEAD4 JASPAR yes 555254
chr3 13575499 13575509 TEAD4 JASPAR yes 70940872
chr3 13575512 13575526 TLX1 JASPAR yes 555255
chr3 13575512 13575526 TLX1 JASPAR yes 70940873
chr3 13575526 13575537 CEBPB JASPAR yes 555256
chr3 13575526 13575537 CEBPB JASPAR yes 70940874
chr3 13575526 13575538 HLF JASPAR yes 555257
chr3 13575526 13575538 HLF JASPAR yes 70940875
chr3 13575527 13575537 CEBPB JASPAR yes 555258
chr3 13575527 13575537 CEBPD JASPAR yes 555259
chr3 13575527 13575537 CEBPE JASPAR yes 555260
chr3 13575527 13575537 CEBPG JASPAR yes 555261
chr3 13575527 13575537 CEBPB JASPAR yes 70940876
chr3 13575527 13575537 CEBPD JASPAR yes 70940877
chr3 13575527 13575537 CEBPE JASPAR yes 70940878
chr3 13575527 13575537 CEBPG JASPAR yes 70940879
chr3 13575527 13575538 CEBPA JASPAR yes 555262
chr3 13575527 13575538 CEBPA JASPAR yes 70940880
chr3 13575544 13575559 RFX5 JASPAR yes 555263
chr3 13575544 13575559 RFX5 JASPAR yes 70940881
chr3 13575550 13575565 AR JASPAR yes 555264
chr3 13575550 13575565 AR JASPAR yes 70940882
chr3 13575567 13575571 NFE TRANSFAC yes 555265
chr3 13575567 13575571 NFE TRANSFAC yes 70940883
chr3 13575579 13575585 ETS1 JASPAR yes 555266
chr3 13575579 13575585 ETS1 JASPAR yes 70940884
chr3 13575583 13575603 TP53 JASPAR yes 555267
chr3 13575583 13575603 TP53 JASPAR yes 70940885
chr3 13575599 13575612 JUN JASPAR yes 555268
chr3 13575599 13575612 JUN JASPAR yes 70940886
chr3 13575637 13575656 RFX2 JASPAR yes 555269
chr3 13575637 13575656 RFX2 JASPAR yes 70940887
chr3 13575639 13575654 IRF9 JASPAR yes 555270
chr3 13575639 13575654 IRF9 JASPAR yes 70940888
chr3 13575640 13575654 IRF7 JASPAR yes 555271
chr3 13575640 13575654 IRF7 JASPAR yes 70940889
chr3 13575642 13575654 IRF1 JASPAR yes 555272
chr3 13575642 13575654 IRF1 JASPAR yes 70940890
SNP sites on vista40033[chr3:13575229-13575656]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 13575313 rs75320915 C A no 6563040
chr3 13575386 rs138994982 C T
TBX20 TFAP2C
6563041
chr3 13575502 rs77159589 G A
CEBPB TEAD4 TFAP2C
6563042
chr3 13575519 rs183009526 T C
CEBPB TFAP2C TLX1
6563043
chr3 13575554 rs10428134 G T
AR CEBPB RFX5 TFAP2C
6563044
chr3 13575559 rs9834375 G A
AR CEBPB RFX5 TFAP2C
6563045
Genes possibly regulated by vista40033[chr3:13575229-13575656]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 13521224 13547916 + HDAC11 ENSG00000163517.10 13521224 0.68 1.0 3425 45995
chr3 13573824 13679922 + FBLN2 ENSG00000163520.9 13573824 0.83 0.99 3426 98595
Expression level of Genes
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miRNAs possibly regulated by vista40033[chr3:13575229-13575656]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results