EnhancerDB
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  3. vista40049[chr3:14287496-14287739]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40049[chr3:14287496-14287739]
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Tissue distribution of vista40049
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Transcription factor that possibly regulate vista40049[chr3:14287496-14287739]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 14287486 14287507 ZNF263 JASPAR yes 590184
chr3 14287486 14287507 ZNF263 JASPAR yes 70941538
chr3 14287497 14287518 ZNF263 JASPAR yes 590186
chr3 14287497 14287518 ZNF263 JASPAR yes 70941539
chr3 14287499 14287504 ETS2 TRANSFAC yes 590187
chr3 14287499 14287504 ETS2 TRANSFAC yes 70941540
chr3 14287505 14287515 ERF JASPAR yes 590188
chr3 14287505 14287515 ETV6 JASPAR yes 590189
chr3 14287505 14287515 ERF JASPAR yes 70941541
chr3 14287505 14287515 ETV6 JASPAR yes 70941542
chr3 14287507 14287512 ETS2 TRANSFAC yes 590190
chr3 14287507 14287512 ETS2 TRANSFAC yes 70941543
chr3 14287507 14287521 STAT1 JASPAR yes 590191
chr3 14287507 14287521 STAT1 JASPAR yes 70941544
chr3 14287510 14287531 ZNF263 JASPAR yes 590192
chr3 14287510 14287531 ZNF263 JASPAR yes 70941545
chr3 14287511 14287532 ZNF263 JASPAR yes 590193
chr3 14287511 14287532 ZNF263 JASPAR yes 70941546
chr3 14287514 14287535 ZNF263 JASPAR yes 590194
chr3 14287514 14287535 ZNF263 JASPAR yes 70941547
chr3 14287518 14287539 ZNF263 JASPAR yes 590195
chr3 14287518 14287539 ZNF263 JASPAR yes 70941548
chr3 14287519 14287540 ZNF263 JASPAR yes 590196
chr3 14287519 14287540 ZNF263 JASPAR yes 70941549
chr3 14287520 14287525 ETS2 TRANSFAC yes 590197
chr3 14287520 14287525 ETS2 TRANSFAC yes 70941550
chr3 14287529 14287544 FOXP1 JASPAR yes 590198
chr3 14287529 14287544 FOXP1 JASPAR yes 70941551
chr3 14287530 14287541 FOXA1 JASPAR yes 590199
chr3 14287530 14287541 FOXA1 JASPAR yes 70941552
chr3 14287531 14287543 FOXC2 JASPAR yes 590200
chr3 14287531 14287543 FOXC2 JASPAR yes 70941553
chr3 14287532 14287543 FOXP2 JASPAR yes 590201
chr3 14287532 14287543 FOXP2 JASPAR yes 70941554
chr3 14287536 14287542 HiNF-A TRANSFAC yes 590202
chr3 14287536 14287542 HiNF-A TRANSFAC yes 70941555
chr3 14287546 14287566 TP53 JASPAR yes 590203
chr3 14287546 14287566 TP53 JASPAR yes 70941556
chr3 14287548 14287568 TP63 JASPAR yes 590204
chr3 14287548 14287568 TP63 JASPAR yes 70941557
chr3 14287549 14287567 TP53 JASPAR yes 590205
chr3 14287549 14287567 TP63 JASPAR yes 590206
chr3 14287549 14287567 TP73 JASPAR yes 590207
chr3 14287549 14287567 TP53 JASPAR yes 70941558
chr3 14287549 14287567 TP63 JASPAR yes 70941559
chr3 14287549 14287567 TP73 JASPAR yes 70941560
chr3 14287550 14287565 TP53 JASPAR yes 590208
chr3 14287550 14287565 TP53 JASPAR yes 70941561
chr3 14287551 14287563 PBX1 JASPAR yes 590209
chr3 14287551 14287563 PBX1 JASPAR yes 70941562
chr3 14287551 14287566 TP53 JASPAR yes 590210
chr3 14287551 14287566 TP53 JASPAR yes 70941563
chr3 14287552 14287563 NFE2L2 JASPAR yes 590211
chr3 14287552 14287563 NFE2L2 JASPAR yes 70941564
chr3 14287585 14287605 ESR1 JASPAR yes 590212
chr3 14287585 14287605 ESR1 JASPAR yes 70941565
chr3 14287588 14287606 ESR2 JASPAR yes 590213
chr3 14287588 14287606 ESR2 JASPAR yes 70941566
chr3 14287589 14287608 PAX5 JASPAR yes 590214
chr3 14287589 14287608 PAX5 JASPAR yes 70941567
chr3 14287590 14287605 ESR2 JASPAR yes 590215
chr3 14287590 14287605 ESR2 JASPAR yes 70941568
chr3 14287590 14287610 ESR1 JASPAR yes 590216
chr3 14287590 14287610 ESR1 JASPAR yes 70941569
chr3 14287591 14287595 ESR1 TRANSFAC yes 590217
chr3 14287591 14287595 ESR1 TRANSFAC yes 70941570
chr3 14287602 14287613 DMRT3 JASPAR yes 590218
chr3 14287602 14287613 DMRT3 JASPAR yes 70941571
chr3 14287606 14287609 MYB TRANSFAC yes 590219
chr3 14287606 14287609 MYB TRANSFAC yes 70941572
chr3 14287610 14287621 EBF1 JASPAR yes 590220
chr3 14287610 14287621 EBF1 JASPAR yes 70941573
chr3 14287633 14287640 SPIB JASPAR yes 590221
chr3 14287633 14287640 SPIB JASPAR yes 70941574
chr3 14287657 14287667 RELA JASPAR yes 590222
chr3 14287657 14287667 RELA JASPAR yes 70941575
chr3 14287660 14287670 NFATC3 JASPAR yes 590223
chr3 14287660 14287670 NFATC3 JASPAR yes 70941576
chr3 14287661 14287668 NFATC2 JASPAR yes 590224
chr3 14287661 14287668 NFATC2 JASPAR yes 70941577
chr3 14287672 14287676 NFE TRANSFAC yes 590225
chr3 14287672 14287676 NFE TRANSFAC yes 70941578
chr3 14287684 14287688 H4TF2 TRANSFAC yes 590226
chr3 14287684 14287688 H4TF2 TRANSFAC yes 70941579
chr3 14287690 14287708 RARA JASPAR yes 590227
chr3 14287690 14287708 RARA JASPAR yes 70941580
chr3 14287708 14287711 MYB TRANSFAC yes 590228
chr3 14287708 14287711 MYB TRANSFAC yes 70941581
chr3 14287739 14287749 MSC JASPAR yes 590229
chr3 14287739 14287749 MYF6 JASPAR yes 590230
chr3 14287739 14287749 NHLH1 JASPAR yes 590231
chr3 14287739 14287749 MSC JASPAR yes 70941582
chr3 14287739 14287749 MYF6 JASPAR yes 70941583
chr3 14287739 14287749 NHLH1 JASPAR yes 70941584
SNP sites on vista40049[chr3:14287496-14287739]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 14287651 rs138567578 T A no 6566911
chr3 14287703 rs10510427 G A
RARA
6566912
chr3 14287712 rs566277330 C T no 6566913
chr3 14287726 rs9839148 T A,C no 6566914
Genes possibly regulated by vista40049[chr3:14287496-14287739]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 14186647 14220283 - XPC ENSG00000154767.10 14220283 0.64 1.0 3432 32787
chr3 14219858 14242619 + LSM3 ENSG00000170860.3 14219858 0.79 0.98 3433 32362
Expression level of Genes
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miRNAs possibly regulated by vista40049[chr3:14287496-14287739]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results