EnhancerDB
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  3. vista40053[chr3:14444961-14445761]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40053[chr3:14444961-14445761]
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Tissue distribution of vista40053
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Transcription factor that possibly regulate vista40053[chr3:14444961-14445761]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 14443705 14445657 POLR2A UCSC Txn Factor no Conserved 108528347
chr3 14443740 14445166 MYC UCSC Txn Factor no Conserved 108528348
chr3 14445090 14445385 SPI1 UCSC Txn Factor no Conserved 108528349
chr3 14444988 14445009 REST JASPAR yes 70941679
chr3 14445009 14445024 HNF4G JASPAR yes 70941680
chr3 14445011 14445015 H4TF2 TRANSFAC yes 70941681
chr3 14445014 14445018 H1TF2 TRANSFAC yes 70941682
chr3 14445014 14445018 NFE TRANSFAC yes 70941683
chr3 14445014 14445018 SRF TRANSFAC yes 70941684
chr3 14445031 14445042 EBF1 JASPAR yes 70941685
chr3 14445052 14445057 TFAP2A TRANSFAC yes 70941686
chr3 14445052 14445058 MZF1 JASPAR yes 70941687
chr3 14445058 14445072 RXRB JASPAR yes 70941688
chr3 14445058 14445072 RXRG JASPAR yes 70941689
chr3 14445061 14445081 ESR1 JASPAR yes 70941690
chr3 14445066 14445081 ESR2 JASPAR yes 70941691
chr3 14445067 14445071 LFA1 TRANSFAC yes 70941692
chr3 14445094 14445109 ZIC4 JASPAR yes 70941693
chr3 14445095 14445109 ZIC1 JASPAR yes 70941694
chr3 14445109 14445118 SNAI2 JASPAR yes 70941695
chr3 14445145 14445150 SP1 TRANSFAC yes 70941696
chr3 14445156 14445169 TFAP2A JASPAR yes 70941697
chr3 14445156 14445169 TFAP2B JASPAR yes 70941698
chr3 14445156 14445169 TFAP2C JASPAR yes 70941699
chr3 14445157 14445166 TFAP2A JASPAR yes 70941700
chr3 14445165 14445169 LFA1 TRANSFAC yes 70941701
chr3 14445194 14445212 RARA JASPAR yes 70941702
chr3 14445207 14445217 ETV6 JASPAR yes 70941703
chr3 14445207 14445226 CTCF JASPAR yes 70941704
chr3 14445210 14445220 MZF1 JASPAR yes 70941705
chr3 14445213 14445219 SP1 TRANSFAC yes 70941706
chr3 14445224 14445228 YY1 TRANSFAC yes 70941707
chr3 14445232 14445237 ETS2 TRANSFAC yes 70941708
chr3 14445242 14445256 SPI1 JASPAR yes 70941709
chr3 14445245 14445252 SPIB JASPAR yes 70941710
chr3 14445270 14445280 MZF1 JASPAR yes 70941711
chr3 14445273 14445279 SP1 TRANSFAC yes 70941712
chr3 14445273 14445283 SP1 JASPAR yes 70941713
chr3 14445273 14445283 ZNF740 JASPAR yes 70941714
chr3 14445285 14445290 ETS2 TRANSFAC yes 70941715
chr3 14445373 14445382 THAP1 JASPAR yes 70941716
chr3 14445376 14445380 LFA1 TRANSFAC yes 70941717
chr3 14445397 14445405 TBX5 JASPAR yes 70941718
chr3 14445425 14445440 MEF2A JASPAR yes 70941719
chr3 14445426 14445441 MEF2C JASPAR yes 70941720
chr3 14445429 14445433 YY1 TRANSFAC yes 70941721
chr3 14445435 14445439 ESR1 TRANSFAC yes 70941722
chr3 14445443 14445457 TLX1 JASPAR yes 70941723
chr3 14445467 14445473 MZF1 JASPAR yes 608377
chr3 14445467 14445473 MZF1 JASPAR yes 70941724
chr3 14445510 14445521 ELK4 JASPAR yes 608378
chr3 14445510 14445521 FLI1 JASPAR yes 608379
chr3 14445510 14445521 ELK4 JASPAR yes 70941725
chr3 14445510 14445521 FLI1 JASPAR yes 70941726
chr3 14445511 14445521 ERG JASPAR yes 608380
chr3 14445511 14445521 ETS1 JASPAR yes 608381
chr3 14445511 14445521 FLI1 JASPAR yes 608382
chr3 14445511 14445521 ERG JASPAR yes 70941727
chr3 14445511 14445521 ETS1 JASPAR yes 70941728
chr3 14445511 14445521 FLI1 JASPAR yes 70941729
chr3 14445511 14445522 ETV2 JASPAR yes 608383
chr3 14445511 14445522 ETV2 JASPAR yes 70941730
chr3 14445517 14445521 NFE TRANSFAC yes 608384
chr3 14445517 14445521 NFE TRANSFAC yes 70941731
chr3 14445522 14445527 TFAP2A TRANSFAC yes 608385
chr3 14445522 14445527 TFAP2A TRANSFAC yes 70941732
chr3 14445522 14445528 MZF1 JASPAR yes 608386
chr3 14445522 14445528 MZF1 JASPAR yes 70941733
chr3 14445533 14445543 SREBF2 JASPAR yes 608387
chr3 14445533 14445543 SREBF2 JASPAR yes 70941734
chr3 14445540 14445548 HOXA5 JASPAR yes 608388
chr3 14445540 14445548 HOXA5 JASPAR yes 70941735
chr3 14445542 14445550 DLX6 JASPAR yes 608389
chr3 14445542 14445550 MSX1 JASPAR yes 608390
chr3 14445542 14445550 DLX6 JASPAR yes 70941736
chr3 14445542 14445550 MSX1 JASPAR yes 70941737
chr3 14445553 14445563 NKX2-3 JASPAR yes 608391
chr3 14445553 14445563 NKX2-3 JASPAR yes 70941738
chr3 14445554 14445563 NKX2-8 JASPAR yes 608392
chr3 14445554 14445563 NKX2-8 JASPAR yes 70941739
chr3 14445602 14445606 YY1 TRANSFAC yes 608393
chr3 14445602 14445606 YY1 TRANSFAC yes 70941740
chr3 14445630 14445640 NFIA JASPAR yes 608394
chr3 14445630 14445640 NFIA JASPAR yes 70941741
chr3 14445631 14445640 NFIX JASPAR yes 608395
chr3 14445631 14445640 NFIX JASPAR yes 70941742
chr3 14445632 14445638 NFIC JASPAR yes 608396
chr3 14445632 14445638 NFIC JASPAR yes 70941743
chr3 14445636 14445646 TFAP4 JASPAR yes 608397
chr3 14445636 14445646 TFAP4 JASPAR yes 70941744
chr3 14445642 14445647 ATF1 TRANSFAC yes 608398
chr3 14445642 14445647 ATF1 TRANSFAC yes 70941745
chr3 14445645 14445662 RARA JASPAR yes 608399
chr3 14445645 14445662 RARA JASPAR yes 70941746
chr3 14445676 14445697 IRF1 JASPAR yes 608400
chr3 14445676 14445697 IRF1 JASPAR yes 70941747
chr3 14445695 14445701 TCF4 TRANSFAC yes 608401
chr3 14445695 14445701 TCF4 TRANSFAC yes 70941748
chr3 14445710 14445716 MAZ TRANSFAC yes 608402
chr3 14445710 14445716 MAZ TRANSFAC yes 70941749
chr3 14445712 14445730 NR3C1 JASPAR yes 608403
chr3 14445712 14445730 NR3C1 JASPAR yes 70941750
chr3 14445747 14445762 MEF2A JASPAR yes 608404
chr3 14445747 14445762 MEF2A JASPAR yes 70941751
chr3 14445748 14445763 MEF2C JASPAR yes 608405
chr3 14445748 14445763 MEF2C JASPAR yes 70941752
chr3 14445749 14445761 MEF2A JASPAR yes 608406
chr3 14445749 14445761 MEF2D JASPAR yes 608407
chr3 14445749 14445761 MEF2A JASPAR yes 70941753
chr3 14445749 14445761 MEF2D JASPAR yes 70941754
chr3 14445750 14445760 MEF2A JASPAR yes 608408
chr3 14445750 14445760 MEF2A JASPAR yes 70941755
chr3 14445751 14445755 YY1 TRANSFAC yes 608409
chr3 14445751 14445755 YY1 TRANSFAC yes 70941756
chr3 14445753 14445763 HOXA13 JASPAR yes 608410
chr3 14445753 14445763 HOXB13 JASPAR yes 608411
chr3 14445753 14445763 HOXC10 JASPAR yes 608412
chr3 14445753 14445763 HOXD11 JASPAR yes 608413
chr3 14445753 14445763 HOXD13 JASPAR yes 608414
chr3 14445753 14445763 HOXA13 JASPAR yes 70941757
chr3 14445753 14445763 HOXB13 JASPAR yes 70941758
chr3 14445753 14445763 HOXC10 JASPAR yes 70941759
chr3 14445753 14445763 HOXD11 JASPAR yes 70941760
chr3 14445753 14445763 HOXD13 JASPAR yes 70941761
chr3 14445753 14445764 HOXA10 JASPAR yes 608415
chr3 14445753 14445764 HOXC11 JASPAR yes 608416
chr3 14445753 14445764 HOXC13 JASPAR yes 608417
chr3 14445753 14445764 HOXA10 JASPAR yes 70941762
chr3 14445753 14445764 HOXC11 JASPAR yes 70941763
chr3 14445753 14445764 HOXC13 JASPAR yes 70941764
chr3 14445754 14445763 CDX1 JASPAR yes 608418
chr3 14445754 14445763 CDX1 JASPAR yes 70941765
chr3 14445754 14445765 CDX2 JASPAR yes 608419
chr3 14445754 14445765 CDX2 JASPAR yes 70941766
chr3 14445759 14445774 PRDM1 JASPAR yes 608420
chr3 14445759 14445774 PRDM1 JASPAR yes 70941767
SNP sites on vista40053[chr3:14444961-14445761]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 14445177 rs141088058 G A
POLR2A SPI1
6569258
chr3 14445183 rs571684642 T A,C
POLR2A SPI1
6569259
chr3 14445191 rs537533290 C T
POLR2A SPI1
6569260
chr3 14445241 rs556109088 G T
POLR2A SPI1
6569261
chr3 14445272 rs137961969 T C
MZF1 POLR2A SPI1
6569262
chr3 14445335 rs572365035 G A
POLR2A SPI1
6569263
chr3 14445481 rs143219744 C G
POLR2A
6569264
chr3 14445543 rs80120927 G A
DLX6 HOXA5 MSX1 POLR2A SREBF2
6569265
chr3 14445547 rs529404731 T A
DLX6 HOXA5 MSX1 POLR2A
6569266
Genes possibly regulated by vista40053[chr3:14444961-14445761]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 14444076 14530857 + SLC6A6 ENSG00000131389.12 14444076 0.82 1.0 3434 99115
Expression level of Genes
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miRNAs possibly regulated by vista40053[chr3:14444961-14445761]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results