EnhancerDB
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  3. vista40054[chr3:14451404-14452012]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40054[chr3:14451404-14452012]
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Tissue distribution of vista40054
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Transcription factor that possibly regulate vista40054[chr3:14451404-14452012]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 14450858 14452814 POLR2A UCSC Txn Factor no Conserved 108528350
chr3 14451405 14451414 SOX9 JASPAR yes 609148
chr3 14451405 14451414 SOX9 JASPAR yes 70941768
chr3 14451411 14451429 ESR1 JASPAR yes 609149
chr3 14451411 14451429 ESR1 JASPAR yes 70941769
chr3 14451438 14451459 LUN1 TRANSFAC yes 609150
chr3 14451438 14451459 LUN1 TRANSFAC yes 70941770
chr3 14451455 14451469 PLAG1 JASPAR yes 609151
chr3 14451455 14451469 PLAG1 JASPAR yes 70941771
chr3 14451462 14451467 SP1 TRANSFAC yes 609152
chr3 14451462 14451467 SP1 TRANSFAC yes 70941772
chr3 14451463 14451468 SP1 TRANSFAC yes 609153
chr3 14451463 14451468 SP1 TRANSFAC yes 70941773
chr3 14451466 14451471 SP1 TRANSFAC yes 609154
chr3 14451466 14451471 SP1 TRANSFAC yes 70941774
chr3 14451475 14451488 NR2F1 JASPAR yes 609155
chr3 14451475 14451488 NR2F1 JASPAR yes 70941775
chr3 14451477 14451495 RARA JASPAR yes 609156
chr3 14451477 14451495 RARA JASPAR yes 70941776
chr3 14451479 14451483 ESR1 TRANSFAC yes 609157
chr3 14451479 14451483 ESR1 TRANSFAC yes 70941777
chr3 14451504 14451508 H1TF2 TRANSFAC yes 609158
chr3 14451504 14451508 NFE TRANSFAC yes 609159
chr3 14451504 14451508 SRF TRANSFAC yes 609160
chr3 14451504 14451508 H1TF2 TRANSFAC yes 70941778
chr3 14451504 14451508 NFE TRANSFAC yes 70941779
chr3 14451504 14451508 SRF TRANSFAC yes 70941780
chr3 14451508 14451519 CEBPA JASPAR yes 609161
chr3 14451508 14451519 CEBPA JASPAR yes 70941781
chr3 14451508 14451520 HLF JASPAR yes 609162
chr3 14451508 14451520 HLF JASPAR yes 70941782
chr3 14451509 14451520 CEBPB JASPAR yes 609163
chr3 14451509 14451520 CEBPB JASPAR yes 70941783
chr3 14451510 14451523 NFKB1 JASPAR yes 609164
chr3 14451510 14451523 NFKB2 JASPAR yes 609165
chr3 14451510 14451523 NFKB1 JASPAR yes 70941784
chr3 14451510 14451523 NFKB2 JASPAR yes 70941785
chr3 14451521 14451525 YY1 TRANSFAC yes 609166
chr3 14451521 14451525 YY1 TRANSFAC yes 70941786
chr3 14451526 14451541 MEF2C JASPAR yes 609167
chr3 14451526 14451541 MEF2C JASPAR yes 70941787
chr3 14451527 14451542 MEF2A JASPAR yes 609168
chr3 14451527 14451542 MEF2A JASPAR yes 70941788
chr3 14451528 14451540 MEF2A JASPAR yes 609169
chr3 14451528 14451540 MEF2B JASPAR yes 609170
chr3 14451528 14451540 MEF2D JASPAR yes 609171
chr3 14451528 14451540 MEF2A JASPAR yes 70941789
chr3 14451528 14451540 MEF2B JASPAR yes 70941790
chr3 14451528 14451540 MEF2D JASPAR yes 70941791
chr3 14451547 14451557 ID4 JASPAR yes 609172
chr3 14451547 14451557 ID4 JASPAR yes 70941792
chr3 14451559 14451564 SP1 TRANSFAC yes 609173
chr3 14451559 14451564 SP1 TRANSFAC yes 70941793
chr3 14451559 14451568 HIC2 JASPAR yes 609174
chr3 14451559 14451568 HIC2 JASPAR yes 70941794
chr3 14451562 14451566 LFA1 TRANSFAC yes 609175
chr3 14451562 14451566 LFA1 TRANSFAC yes 70941795
chr3 14451563 14451573 ID4 JASPAR yes 609176
chr3 14451563 14451573 TCF3 JASPAR yes 609177
chr3 14451563 14451573 TCF4 JASPAR yes 609178
chr3 14451563 14451573 ID4 JASPAR yes 70941796
chr3 14451563 14451573 TCF3 JASPAR yes 70941797
chr3 14451563 14451573 TCF4 JASPAR yes 70941798
chr3 14451564 14451573 SNAI2 JASPAR yes 609179
chr3 14451564 14451573 SNAI2 JASPAR yes 70941799
chr3 14451565 14451570 USF2 TRANSFAC yes 609180
chr3 14451565 14451570 USF2 TRANSFAC yes 70941800
chr3 14451574 14451586 NHLH1 JASPAR yes 609181
chr3 14451574 14451586 NHLH1 JASPAR yes 70941801
chr3 14451575 14451585 NHLH1 JASPAR yes 609182
chr3 14451575 14451585 NHLH1 JASPAR yes 70941802
chr3 14451612 14451616 LFA1 TRANSFAC yes 609183
chr3 14451612 14451616 LFA1 TRANSFAC yes 70941803
chr3 14451617 14451634 ESR1 JASPAR yes 609184
chr3 14451617 14451634 ESR1 JASPAR yes 70941804
chr3 14451617 14451635 ESR2 JASPAR yes 609185
chr3 14451617 14451635 ESR2 JASPAR yes 70941805
chr3 14451621 14451635 TLX1 JASPAR yes 609186
chr3 14451621 14451635 TLX1 JASPAR yes 70941806
chr3 14451626 14451637 FOXA1 JASPAR yes 609187
chr3 14451626 14451637 FOXA1 JASPAR yes 70941807
chr3 14451657 14451676 PAX5 JASPAR yes 609188
chr3 14451657 14451676 PAX5 JASPAR yes 70941808
chr3 14451681 14451696 FOXP1 JASPAR yes 609189
chr3 14451681 14451696 FOXP1 JASPAR yes 70941809
chr3 14451682 14451697 FOXP1 JASPAR yes 609190
chr3 14451682 14451697 FOXP1 JASPAR yes 70941810
chr3 14451683 14451698 FOXP1 JASPAR yes 609191
chr3 14451683 14451698 FOXP1 JASPAR yes 70941811
chr3 14451683 14451704 IRF1 JASPAR yes 609192
chr3 14451683 14451704 IRF1 JASPAR yes 70941812
chr3 14451684 14451699 FOXP1 JASPAR yes 609193
chr3 14451684 14451699 FOXP1 JASPAR yes 70941813
chr3 14451684 14451705 IRF1 JASPAR yes 609194
chr3 14451684 14451705 IRF1 JASPAR yes 70941814
chr3 14451685 14451700 FOXP1 JASPAR yes 609195
chr3 14451685 14451700 FOXP1 JASPAR yes 70941815
chr3 14451685 14451706 IRF1 JASPAR yes 609196
chr3 14451685 14451706 IRF1 JASPAR yes 70941816
chr3 14451686 14451701 FOXP1 JASPAR yes 609197
chr3 14451686 14451701 FOXP1 JASPAR yes 70941817
chr3 14451686 14451707 IRF1 JASPAR yes 609198
chr3 14451686 14451707 IRF1 JASPAR yes 70941818
chr3 14451687 14451702 FOXP1 JASPAR yes 609199
chr3 14451687 14451702 FOXP1 JASPAR yes 70941819
chr3 14451687 14451708 IRF1 JASPAR yes 609200
chr3 14451687 14451708 IRF1 JASPAR yes 70941820
chr3 14451688 14451703 FOXP1 JASPAR yes 609201
chr3 14451688 14451703 FOXP1 JASPAR yes 70941821
chr3 14451688 14451709 IRF1 JASPAR yes 609202
chr3 14451688 14451709 IRF1 JASPAR yes 70941822
chr3 14451689 14451704 FOXP1 JASPAR yes 609203
chr3 14451689 14451704 FOXP1 JASPAR yes 70941823
chr3 14451690 14451705 FOXP1 JASPAR yes 609204
chr3 14451690 14451705 FOXP1 JASPAR yes 70941824
chr3 14451690 14451711 IRF1 JASPAR yes 609205
chr3 14451690 14451711 IRF1 JASPAR yes 70941825
chr3 14451691 14451706 FOXP1 JASPAR yes 609206
chr3 14451691 14451706 FOXP1 JASPAR yes 70941826
chr3 14451694 14451709 STAT2 JASPAR yes 609207
chr3 14451694 14451709 STAT2 JASPAR yes 70941827
chr3 14451698 14451714 SOX4 JASPAR yes 609208
chr3 14451698 14451714 SOX4 JASPAR yes 70941828
chr3 14451699 14451714 SOX21 JASPAR yes 609209
chr3 14451699 14451714 SOX21 JASPAR yes 70941829
chr3 14451699 14451715 SOX4 JASPAR yes 609210
chr3 14451699 14451715 SOX4 JASPAR yes 70941830
chr3 14451706 14451715 SOX9 JASPAR yes 609211
chr3 14451706 14451715 SOX9 JASPAR yes 70941831
chr3 14451708 14451717 SRY JASPAR yes 609212
chr3 14451708 14451717 SRY JASPAR yes 70941832
chr3 14451712 14451725 ZBTB18 JASPAR yes 609213
chr3 14451712 14451725 ZBTB18 JASPAR yes 70941833
chr3 14451735 14451745 MZF1 JASPAR yes 609214
chr3 14451735 14451745 MZF1 JASPAR yes 70941834
chr3 14451735 14451756 ZNF263 JASPAR yes 609215
chr3 14451735 14451756 ZNF263 JASPAR yes 70941835
chr3 14451736 14451746 SP1 JASPAR yes 609216
chr3 14451736 14451746 SP1 JASPAR yes 70941836
chr3 14451737 14451757 RREB1 JASPAR yes 609217
chr3 14451737 14451757 RREB1 JASPAR yes 70941837
chr3 14451738 14451744 SP1 TRANSFAC yes 609218
chr3 14451738 14451744 SP1 TRANSFAC yes 70941838
chr3 14451738 14451748 SP1 JASPAR yes 609219
chr3 14451738 14451748 SP1 JASPAR yes 70941839
chr3 14451751 14451767 ZNF143 JASPAR yes 609220
chr3 14451751 14451767 ZNF143 JASPAR yes 70941840
chr3 14451754 14451766 PBX1 JASPAR yes 609221
chr3 14451754 14451766 PBX1 JASPAR yes 70941841
chr3 14451776 14451786 ZNF740 JASPAR yes 609222
chr3 14451776 14451786 ZNF740 JASPAR yes 70941842
chr3 14451784 14451791 MEIS1 JASPAR yes 609223
chr3 14451784 14451791 MEIS1 JASPAR yes 70941843
chr3 14451784 14451792 MEIS2 JASPAR yes 609224
chr3 14451784 14451792 MEIS3 JASPAR yes 609225
chr3 14451784 14451792 MEIS2 JASPAR yes 70941844
chr3 14451784 14451792 MEIS3 JASPAR yes 70941845
chr3 14451790 14451796 MAZ TRANSFAC yes 609226
chr3 14451790 14451796 MAZ TRANSFAC yes 70941846
chr3 14451801 14451806 ETS2 TRANSFAC yes 609227
chr3 14451801 14451806 ETS2 TRANSFAC yes 70941847
chr3 14451848 14451861 SMAD2 JASPAR yes 609228
chr3 14451848 14451861 SMAD2 JASPAR yes 70941848
chr3 14451855 14451868 ELF3 JASPAR yes 609229
chr3 14451855 14451868 ELF3 JASPAR yes 70941849
chr3 14451856 14451867 ELF5 JASPAR yes 609230
chr3 14451856 14451867 SPDEF JASPAR yes 609231
chr3 14451856 14451867 ELF5 JASPAR yes 70941850
chr3 14451856 14451867 SPDEF JASPAR yes 70941851
chr3 14451856 14451868 ELF1 JASPAR yes 609232
chr3 14451856 14451868 ELF4 JASPAR yes 609233
chr3 14451856 14451868 ELF1 JASPAR yes 70941852
chr3 14451856 14451868 ELF4 JASPAR yes 70941853
chr3 14451869 14451881 PKNOX2 JASPAR yes 609234
chr3 14451869 14451881 PKNOX2 JASPAR yes 70941854
chr3 14451888 14451903 NR2C2 JASPAR yes 609235
chr3 14451888 14451903 NR2C2 JASPAR yes 70941855
chr3 14451890 14451901 E2F6 JASPAR yes 609236
chr3 14451890 14451901 E2F6 JASPAR yes 70941856
chr3 14451891 14451896 SP1 TRANSFAC yes 609237
chr3 14451891 14451896 SP1 TRANSFAC yes 70941857
chr3 14451894 14451900 MAZ TRANSFAC yes 609238
chr3 14451894 14451900 MAZ TRANSFAC yes 70941858
chr3 14451898 14451902 LFA1 TRANSFAC yes 609239
chr3 14451898 14451902 LFA1 TRANSFAC yes 70941859
chr3 14451905 14451916 DMRT3 JASPAR yes 609240
chr3 14451905 14451916 DMRT3 JASPAR yes 70941860
chr3 14451916 14451922 TCF4 TRANSFAC yes 609241
chr3 14451916 14451922 TCF4 TRANSFAC yes 70941861
chr3 14451919 14451931 PROX1 JASPAR yes 609242
chr3 14451919 14451931 PROX1 JASPAR yes 70941862
chr3 14451970 14451987 BCL6B JASPAR yes 609243
chr3 14451970 14451987 BCL6B JASPAR yes 70941863
chr3 14451971 14451986 STAT1 JASPAR yes 609244
chr3 14451971 14451986 STAT1 JASPAR yes 70941864
chr3 14451972 14451989 RARA JASPAR yes 609245
chr3 14451972 14451989 RARA JASPAR yes 70941865
chr3 14451973 14451984 STAT1 JASPAR yes 609246
chr3 14451973 14451984 STAT3 JASPAR yes 609247
chr3 14451973 14451984 STAT1 JASPAR yes 70941866
chr3 14451973 14451984 STAT3 JASPAR yes 70941867
chr3 14451979 14451994 HSF1 JASPAR yes 609248
chr3 14451979 14451994 HSF1 JASPAR yes 70941868
SNP sites on vista40054[chr3:14451404-14452012]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 14451471 rs569835513 G A
POLR2A SP1
6569368
chr3 14451478 rs141824401 G A
NR2F1 POLR2A RARA
6569369
chr3 14451492 rs374655407 G A
POLR2A RARA
6569370
chr3 14451555 rs150641615 G A
ID4 POLR2A
6569371
chr3 14451604 rs192470729 G T
POLR2A
6569372
chr3 14451663 rs115810065 C T
PAX5 POLR2A
6569373
chr3 14451664 rs139733283 G A
PAX5 POLR2A
6569374
chr3 14451741 rs185560671 C A,G
MZF1 POLR2A RREB1 SP1 ZNF263
6569375
chr3 14451751 rs190071859 G A
POLR2A RREB1 ZNF143 ZNF263
6569376
chr3 14451761 rs11710184 T C
PBX1 POLR2A ZNF143
6569377
chr3 14451783 rs9810533 C A,T
POLR2A ZNF740
6569378
chr3 14451836 rs531044541 G A
POLR2A
6569379
chr3 14451837 rs9810939 G A
POLR2A
6569380
chr3 14451928 rs192951089 C T
POLR2A PROX1
6569381
chr3 14452009 rs570875887 G T
POLR2A
6569382
Genes possibly regulated by vista40054[chr3:14451404-14452012]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 14444076 14530857 + SLC6A6 ENSG00000131389.12 14444076 0.82 1.0 3434 92672
Expression level of Genes
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miRNAs possibly regulated by vista40054[chr3:14451404-14452012]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results