EnhancerDB
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  3. vista40060[chr3:14481056-14481424]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40060[chr3:14481056-14481424]
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Tissue distribution of vista40060
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Transcription factor that possibly regulate vista40060[chr3:14481056-14481424]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 14480897 14481633 ZNF263 UCSC Txn Factor no Conserved 108528354
chr3 14481081 14481096 SCRT1 JASPAR yes 613278
chr3 14481081 14481096 SCRT1 JASPAR yes 70942023
chr3 14481088 14481104 RFX2 JASPAR yes 613279
chr3 14481088 14481104 RFX3 JASPAR yes 613280
chr3 14481088 14481104 RFX4 JASPAR yes 613281
chr3 14481088 14481104 RFX2 JASPAR yes 70942024
chr3 14481088 14481104 RFX3 JASPAR yes 70942025
chr3 14481088 14481104 RFX4 JASPAR yes 70942026
chr3 14481099 14481102 MYB TRANSFAC yes 613282
chr3 14481099 14481102 MYB TRANSFAC yes 70942027
chr3 14481102 14481116 SPI1 JASPAR yes 613283
chr3 14481102 14481116 SPIC JASPAR yes 613284
chr3 14481102 14481116 SPI1 JASPAR yes 70942028
chr3 14481102 14481116 SPIC JASPAR yes 70942029
chr3 14481103 14481116 ELF1 JASPAR yes 613285
chr3 14481103 14481116 ELF1 JASPAR yes 70942030
chr3 14481106 14481113 SPIB JASPAR yes 613286
chr3 14481106 14481113 SPIB JASPAR yes 70942031
chr3 14481119 14481133 SPI1 JASPAR yes 613287
chr3 14481119 14481133 SPI1 JASPAR yes 70942032
chr3 14481123 14481128 TFAP2A TRANSFAC yes 613288
chr3 14481123 14481128 TFAP2A TRANSFAC yes 70942033
chr3 14481123 14481129 MZF1 JASPAR yes 613289
chr3 14481123 14481129 MZF1 JASPAR yes 70942034
chr3 14481134 14481139 GATA1 TRANSFAC yes 613290
chr3 14481134 14481139 GATA1 TRANSFAC yes 70942035
chr3 14481154 14481157 MYB TRANSFAC yes 613291
chr3 14481154 14481157 MYB TRANSFAC yes 70942036
chr3 14481160 14481174 TLX1 JASPAR yes 613292
chr3 14481160 14481174 TLX1 JASPAR yes 70942037
chr3 14481161 14481175 TLX1 JASPAR yes 613293
chr3 14481161 14481175 TLX1 JASPAR yes 70942038
chr3 14481167 14481176 NFIX JASPAR yes 613294
chr3 14481167 14481176 NFIX JASPAR yes 70942039
chr3 14481167 14481177 NFIA JASPAR yes 613295
chr3 14481167 14481177 NFIA JASPAR yes 70942040
chr3 14481169 14481175 NFIC JASPAR yes 613296
chr3 14481169 14481175 NFIC JASPAR yes 70942041
chr3 14481171 14481186 FOXP1 JASPAR yes 613297
chr3 14481171 14481186 FOXP1 JASPAR yes 70942042
chr3 14481172 14481183 FOXA1 JASPAR yes 613298
chr3 14481172 14481183 FOXA1 JASPAR yes 70942043
chr3 14481173 14481178 ETS2 TRANSFAC yes 613299
chr3 14481173 14481178 ETS2 TRANSFAC yes 70942044
chr3 14481174 14481185 FOXP2 JASPAR yes 613300
chr3 14481174 14481185 FOXP2 JASPAR yes 70942045
chr3 14481175 14481183 FOXO3 JASPAR yes 613301
chr3 14481175 14481183 FOXO3 JASPAR yes 70942046
chr3 14481192 14481197 SP1 TRANSFAC yes 613302
chr3 14481192 14481197 SP1 TRANSFAC yes 70942047
chr3 14481243 14481257 ZIC1 JASPAR yes 613303
chr3 14481243 14481257 ZIC1 JASPAR yes 70942048
chr3 14481255 14481265 NKX2-3 JASPAR yes 613304
chr3 14481255 14481265 NKX2-3 JASPAR yes 70942049
chr3 14481279 14481289 SREBF1 JASPAR yes 613305
chr3 14481279 14481289 SREBF2 JASPAR yes 613306
chr3 14481279 14481289 SREBF1 JASPAR yes 70942050
chr3 14481279 14481289 SREBF2 JASPAR yes 70942051
chr3 14481293 14481301 BARX1 JASPAR yes 613307
chr3 14481293 14481301 EN1 JASPAR yes 613308
chr3 14481293 14481301 ISL2 JASPAR yes 613309
chr3 14481293 14481301 MSX1 JASPAR yes 613310
chr3 14481293 14481301 MSX2 JASPAR yes 613311
chr3 14481293 14481301 PDX1 JASPAR yes 613312
chr3 14481293 14481301 BARX1 JASPAR yes 70942052
chr3 14481293 14481301 EN1 JASPAR yes 70942053
chr3 14481293 14481301 ISL2 JASPAR yes 70942054
chr3 14481293 14481301 MSX1 JASPAR yes 70942055
chr3 14481293 14481301 MSX2 JASPAR yes 70942056
chr3 14481293 14481301 PDX1 JASPAR yes 70942057
chr3 14481329 14481340 NFKB1 JASPAR yes 613313
chr3 14481329 14481340 NFKB1 JASPAR yes 70942058
chr3 14481330 14481340 NFKB1 JASPAR yes 613314
chr3 14481330 14481340 NFKB1 JASPAR yes 70942059
chr3 14481335 14481349 GLIS3 JASPAR yes 613315
chr3 14481335 14481349 GLIS3 JASPAR yes 70942060
chr3 14481336 14481347 EBF1 JASPAR yes 613316
chr3 14481336 14481347 EBF1 JASPAR yes 70942061
chr3 14481351 14481371 ESR1 JASPAR yes 613317
chr3 14481351 14481371 ESR1 JASPAR yes 70942062
chr3 14481354 14481362 CREB1 JASPAR yes 613318
chr3 14481354 14481362 CREB1 JASPAR yes 70942063
chr3 14481355 14481372 ESR1 JASPAR yes 613319
chr3 14481355 14481372 ESR1 JASPAR yes 70942064
chr3 14481355 14481373 ESR2 JASPAR yes 613320
chr3 14481355 14481373 ESR2 JASPAR yes 70942065
chr3 14481356 14481371 ESR2 JASPAR yes 613321
chr3 14481356 14481371 ESR2 JASPAR yes 70942066
chr3 14481356 14481376 ESR1 JASPAR yes 613322
chr3 14481356 14481376 ESR1 JASPAR yes 70942067
chr3 14481357 14481361 ESR1 TRANSFAC yes 613323
chr3 14481357 14481361 ESR1 TRANSFAC yes 70942068
chr3 14481405 14481416 DMRT3 JASPAR yes 613324
chr3 14481405 14481416 DMRT3 JASPAR yes 70942069
chr3 14481407 14481412 GATA2 JASPAR yes 613325
chr3 14481407 14481412 GATA2 JASPAR yes 70942070
chr3 14481418 14481422 ESR1 TRANSFAC yes 613326
chr3 14481418 14481422 ESR1 TRANSFAC yes 70942071
SNP sites on vista40060[chr3:14481056-14481424]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 14481188 rs373824445 T C
ZNF263
6569848
chr3 14481225 rs114150766 C T
ZNF263
6569849
chr3 14481273 rs529454908 G A
ZNF263
6569850
chr3 14481274 rs893084 A T
ZNF263
6569851
chr3 14481277 rs565568087 A G
ZNF263
6569852
chr3 14481285 rs557646868 G A
SREBF1 SREBF2 ZNF263
6569853
chr3 14481330 rs549582830 C T
NFKB1 ZNF263
6569854
chr3 14481418 rs138322745 C T
ESR1 ZNF263
6569855
Genes possibly regulated by vista40060[chr3:14481056-14481424]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 14444076 14530857 + SLC6A6 ENSG00000131389.12 14444076 0.82 1.0 3434 63020
Expression level of Genes
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miRNAs possibly regulated by vista40060[chr3:14481056-14481424]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results