EnhancerDB
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  3. vista40080[chr3:15329162-15329412]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40080[chr3:15329162-15329412]
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Tissue distribution of vista40080
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Transcription factor that possibly regulate vista40080[chr3:15329162-15329412]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 15329081 15329385 CEBPB UCSC Txn Factor no Conserved 108528362
chr3 15329158 15329173 MEF2A JASPAR yes 651443
chr3 15329158 15329173 MEF2A JASPAR yes 70942945
chr3 15329159 15329174 MEF2C JASPAR yes 651444
chr3 15329159 15329174 MEF2C JASPAR yes 70942946
chr3 15329162 15329166 YY1 TRANSFAC yes 651445
chr3 15329162 15329166 YY1 TRANSFAC yes 70942947
chr3 15329192 15329197 ETS2 TRANSFAC yes 651446
chr3 15329192 15329197 ETS2 TRANSFAC yes 70942948
chr3 15329220 15329233 ATF4 JASPAR yes 651447
chr3 15329220 15329233 ATF4 JASPAR yes 70942949
chr3 15329221 15329232 CEBPA JASPAR yes 651448
chr3 15329221 15329232 CEBPA JASPAR yes 70942950
chr3 15329221 15329233 DBP JASPAR yes 651449
chr3 15329221 15329233 HLF JASPAR yes 651450
chr3 15329221 15329233 TEF JASPAR yes 651451
chr3 15329221 15329233 DBP JASPAR yes 70942951
chr3 15329221 15329233 HLF JASPAR yes 70942952
chr3 15329221 15329233 TEF JASPAR yes 70942953
chr3 15329222 15329232 CEBPB JASPAR yes 651452
chr3 15329222 15329232 CEBPD JASPAR yes 651453
chr3 15329222 15329232 CEBPE JASPAR yes 651454
chr3 15329222 15329232 CEBPG JASPAR yes 651455
chr3 15329222 15329232 CEBPB JASPAR yes 70942954
chr3 15329222 15329232 CEBPD JASPAR yes 70942955
chr3 15329222 15329232 CEBPE JASPAR yes 70942956
chr3 15329222 15329232 CEBPG JASPAR yes 70942957
chr3 15329222 15329233 CEBPB JASPAR yes 651456
chr3 15329222 15329233 CEBPB JASPAR yes 70942958
chr3 15329223 15329242 PAX5 JASPAR yes 651457
chr3 15329223 15329242 PAX5 JASPAR yes 70942959
chr3 15329226 15329243 PAX9 JASPAR yes 651458
chr3 15329226 15329243 PAX9 JASPAR yes 70942960
chr3 15329244 15329257 JUN JASPAR yes 651459
chr3 15329244 15329257 JUN JASPAR yes 70942961
chr3 15329245 15329258 ATF4 JASPAR yes 651460
chr3 15329245 15329258 ATF4 JASPAR yes 70942962
chr3 15329246 15329258 JDP2 JASPAR yes 651461
chr3 15329246 15329258 JDP2 JASPAR yes 70942963
chr3 15329247 15329260 DUXA JASPAR yes 651462
chr3 15329247 15329260 DUXA JASPAR yes 70942964
chr3 15329248 15329259 DUX4 JASPAR yes 651463
chr3 15329248 15329259 NFIL3 JASPAR yes 651464
chr3 15329248 15329259 DUX4 JASPAR yes 70942965
chr3 15329248 15329259 NFIL3 JASPAR yes 70942966
chr3 15329285 15329300 SOX21 JASPAR yes 651465
chr3 15329285 15329300 SOX21 JASPAR yes 70942967
chr3 15329285 15329301 SOX4 JASPAR yes 651466
chr3 15329285 15329301 SOX4 JASPAR yes 70942968
chr3 15329305 15329310 ATF1 TRANSFAC yes 651467
chr3 15329305 15329310 ATF1 TRANSFAC yes 70942969
chr3 15329362 15329367 SP1 TRANSFAC yes 651468
chr3 15329362 15329367 SP1 TRANSFAC yes 70942970
chr3 15329386 15329392 SOX10 JASPAR yes 651469
chr3 15329386 15329392 SOX10 JASPAR yes 70942971
chr3 15329390 15329405 RUNX2 JASPAR yes 651470
chr3 15329390 15329405 RUNX2 JASPAR yes 70942972
chr3 15329399 15329403 ESR1 TRANSFAC yes 651471
chr3 15329399 15329403 ESR1 TRANSFAC yes 70942973
SNP sites on vista40080[chr3:15329162-15329412]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 15329194 rs566618788 G A
CEBPB ETS2
6574238
chr3 15329284 rs183072442 C T
CEBPB
6574239
chr3 15329309 rs146055890 C T
ATF1 CEBPB
6574240
chr3 15329364 rs528826110 G GGGCCA
CEBPB SP1
6574241
Genes possibly regulated by vista40080[chr3:15329162-15329412]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 15247659 15294425 + CAPN7 ENSG00000131375.5 15247659 0.66 0.99 3441 18497
chr3 15296360 15382875 - SH3BP5 ENSG00000131370.11 15382875 0.69 0.99 3442 46537
Expression level of Genes
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miRNAs possibly regulated by vista40080[chr3:15329162-15329412]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results