EnhancerDB
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  3. vista40082[chr3:15334615-15334919]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40082[chr3:15334615-15334919]
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Tissue distribution of vista40082
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Transcription factor that possibly regulate vista40082[chr3:15334615-15334919]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 15334635 15335036 TFAP2C UCSC Txn Factor no Conserved 108528363
chr3 15334612 15334623 FLI1 JASPAR yes 652175
chr3 15334612 15334623 FLI1 JASPAR yes 70942993
chr3 15334613 15334620 PEA3 TRANSFAC yes 652176
chr3 15334613 15334620 PEA3 TRANSFAC yes 70942994
chr3 15334619 15334627 NR4A2 JASPAR yes 652177
chr3 15334619 15334627 NR4A2 JASPAR yes 70942995
chr3 15334663 15334674 CDX2 JASPAR yes 652178
chr3 15334663 15334674 CDX2 JASPAR yes 70942996
chr3 15334665 15334674 CDX1 JASPAR yes 652179
chr3 15334665 15334674 CDX1 JASPAR yes 70942997
chr3 15334694 15334704 NEUROG2 JASPAR yes 652180
chr3 15334694 15334704 NEUROG2 JASPAR yes 70942998
chr3 15334700 15334711 NFE2L2 JASPAR yes 652181
chr3 15334700 15334711 NFE2L2 JASPAR yes 70942999
chr3 15334703 15334711 MEIS2 JASPAR yes 652182
chr3 15334703 15334711 MEIS3 JASPAR yes 652183
chr3 15334703 15334711 MEIS2 JASPAR yes 70943000
chr3 15334703 15334711 MEIS3 JASPAR yes 70943001
chr3 15334704 15334708 NFE TRANSFAC yes 652184
chr3 15334704 15334708 NFE TRANSFAC yes 70943002
chr3 15334732 15334736 LFA1 TRANSFAC yes 652185
chr3 15334732 15334736 LFA1 TRANSFAC yes 70943003
chr3 15334748 15334763 RFX5 JASPAR yes 652186
chr3 15334748 15334763 RFX5 JASPAR yes 70943004
chr3 15334751 15334766 RFX5 JASPAR yes 652187
chr3 15334751 15334766 RFX5 JASPAR yes 70943005
chr3 15334761 15334776 TFAP2A JASPAR yes 652188
chr3 15334761 15334776 TFAP2A JASPAR yes 70943006
chr3 15334762 15334776 TLX1 JASPAR yes 652189
chr3 15334762 15334776 TLX1 JASPAR yes 70943007
chr3 15334762 15334777 HNF4A JASPAR yes 652190
chr3 15334762 15334777 HNF4A JASPAR yes 70943008
chr3 15334771 15334786 ZIC4 JASPAR yes 652191
chr3 15334771 15334786 ZIC4 JASPAR yes 70943009
chr3 15334775 15334786 EBF1 JASPAR yes 652192
chr3 15334775 15334786 EBF1 JASPAR yes 70943010
chr3 15334779 15334791 TEAD1 JASPAR yes 652193
chr3 15334779 15334791 TEAD1 JASPAR yes 70943011
chr3 15334780 15334800 ESR1 JASPAR yes 652194
chr3 15334780 15334800 ESR1 JASPAR yes 70943012
chr3 15334781 15334791 TEAD1 JASPAR yes 652195
chr3 15334781 15334791 TEAD1 JASPAR yes 70943013
chr3 15334803 15334808 ETS2 TRANSFAC yes 652196
chr3 15334803 15334808 ETS2 TRANSFAC yes 70943014
chr3 15334810 15334815 ATF1 TRANSFAC yes 652197
chr3 15334810 15334815 ATF1 TRANSFAC yes 70943015
chr3 15334853 15334868 TFAP2A JASPAR yes 652198
chr3 15334853 15334868 TFAP2A JASPAR yes 70943016
chr3 15334854 15334869 TFAP2C JASPAR yes 652199
chr3 15334854 15334869 TFAP2C JASPAR yes 70943017
chr3 15334855 15334861 NFE2 TRANSFAC yes 652200
chr3 15334855 15334861 NFE2 TRANSFAC yes 70943018
chr3 15334856 15334868 INSM1 JASPAR yes 652201
chr3 15334856 15334868 TFAP2A JASPAR yes 652202
chr3 15334856 15334868 TFAP2B JASPAR yes 652203
chr3 15334856 15334868 TFAP2C JASPAR yes 652204
chr3 15334856 15334868 INSM1 JASPAR yes 70943019
chr3 15334856 15334868 TFAP2A JASPAR yes 70943020
chr3 15334856 15334868 TFAP2B JASPAR yes 70943021
chr3 15334856 15334868 TFAP2C JASPAR yes 70943022
chr3 15334856 15334871 TFAP2A JASPAR yes 652205
chr3 15334856 15334871 TFAP2A JASPAR yes 70943023
chr3 15334858 15334867 TFAP2A JASPAR yes 652206
chr3 15334858 15334867 TFAP2A JASPAR yes 70943024
chr3 15334885 15334893 GATA3 JASPAR yes 652207
chr3 15334885 15334893 GATA3 JASPAR yes 70943025
chr3 15334890 15334911 ZNF263 JASPAR yes 652208
chr3 15334890 15334911 ZNF263 JASPAR yes 70943026
chr3 15334891 15334912 ZNF263 JASPAR yes 652209
chr3 15334891 15334912 ZNF263 JASPAR yes 70943027
chr3 15334898 15334903 ETS2 TRANSFAC yes 652210
chr3 15334898 15334903 ETS2 TRANSFAC yes 70943028
chr3 15334899 15334918 PAX5 JASPAR yes 652211
chr3 15334899 15334918 PAX5 JASPAR yes 70943029
chr3 15334904 15334909 ETS2 TRANSFAC yes 652212
chr3 15334904 15334909 ETS2 TRANSFAC yes 70943030
chr3 15334904 15334912 EHF JASPAR yes 652213
chr3 15334904 15334912 EHF JASPAR yes 70943031
chr3 15334913 15334924 NFE2L2 JASPAR yes 652214
chr3 15334913 15334924 NFE2L2 JASPAR yes 70943032
chr3 15334916 15334922 SOX10 JASPAR yes 652215
chr3 15334916 15334922 SOX10 JASPAR yes 70943033
chr3 15334917 15334929 IRF1 JASPAR yes 652216
chr3 15334917 15334929 IRF1 JASPAR yes 70943034
SNP sites on vista40082[chr3:15334615-15334919]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 15334625 rs191826228 C A
NR4A2
6574316
chr3 15334748 rs147224346 C T
RFX5 TFAP2C
6574317
chr3 15334859 rs113439747 C A,G
INSM1 NFE2 TFAP2A TFAP2B TFAP2C
6574318
chr3 15334897 rs28657898 C A,T
TFAP2C ZNF263
6574319
Genes possibly regulated by vista40082[chr3:15334615-15334919]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 15247659 15294425 + CAPN7 ENSG00000131375.5 15247659 0.66 0.99 3441 13044
chr3 15296360 15382875 - SH3BP5 ENSG00000131370.11 15382875 0.69 0.99 3442 52044
Expression level of Genes
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miRNAs possibly regulated by vista40082[chr3:15334615-15334919]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results