EnhancerDB
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  3. vista40085[chr3:15337572-15337812]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40085[chr3:15337572-15337812]
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Tissue distribution of vista40085
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Transcription factor that possibly regulate vista40085[chr3:15337572-15337812]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 15337569 15337572 MYB TRANSFAC yes 652620
chr3 15337569 15337572 MYB TRANSFAC yes 70943309
chr3 15337569 15337586 RARA JASPAR yes 652621
chr3 15337569 15337586 RXRA JASPAR yes 652622
chr3 15337569 15337586 RARA JASPAR yes 70943310
chr3 15337569 15337586 RXRA JASPAR yes 70943311
chr3 15337576 15337580 YY1 TRANSFAC yes 652623
chr3 15337576 15337580 YY1 TRANSFAC yes 70943312
chr3 15337578 15337588 MZF1 JASPAR yes 652624
chr3 15337578 15337588 MZF1 JASPAR yes 70943313
chr3 15337579 15337590 EBF1 JASPAR yes 652625
chr3 15337579 15337590 EBF1 JASPAR yes 70943314
chr3 15337644 15337655 RUNX1 JASPAR yes 652626
chr3 15337644 15337655 RUNX1 JASPAR yes 70943315
chr3 15337653 15337663 POU6F2 JASPAR yes 652627
chr3 15337653 15337663 POU6F2 JASPAR yes 70943316
chr3 15337658 15337673 AR JASPAR yes 652628
chr3 15337658 15337673 AR JASPAR yes 70943317
chr3 15337667 15337682 FOXP1 JASPAR yes 652629
chr3 15337667 15337682 FOXP1 JASPAR yes 70943318
chr3 15337668 15337682 FOXF2 JASPAR yes 652630
chr3 15337668 15337682 FOXF2 JASPAR yes 70943319
chr3 15337670 15337674 YY1 TRANSFAC yes 652631
chr3 15337670 15337674 YY1 TRANSFAC yes 70943320
chr3 15337685 15337688 MYB TRANSFAC yes 652632
chr3 15337685 15337688 MYB TRANSFAC yes 70943321
chr3 15337718 15337723 GATA2 JASPAR yes 652633
chr3 15337718 15337723 GATA2 JASPAR yes 70943322
chr3 15337758 15337764 SOX10 JASPAR yes 652634
chr3 15337758 15337764 SOX10 JASPAR yes 70943323
chr3 15337780 15337786 NFIC JASPAR yes 652635
chr3 15337780 15337786 NFIC JASPAR yes 70943324
chr3 15337782 15337786 H1TF2 TRANSFAC yes 652636
chr3 15337782 15337786 NFE TRANSFAC yes 652637
chr3 15337782 15337786 SRF TRANSFAC yes 652638
chr3 15337782 15337786 H1TF2 TRANSFAC yes 70943325
chr3 15337782 15337786 NFE TRANSFAC yes 70943326
chr3 15337782 15337786 SRF TRANSFAC yes 70943327
chr3 15337799 15337803 TEAD2 TRANSFAC yes 652639
chr3 15337799 15337803 TEAD2 TRANSFAC yes 70943328
chr3 15337800 15337808 OTX2 JASPAR yes 652640
chr3 15337800 15337808 OTX2 JASPAR yes 70943329
chr3 15337812 15337825 SMAD2 JASPAR yes 652641
chr3 15337812 15337825 SMAD2 JASPAR yes 70943330
SNP sites on vista40085[chr3:15337572-15337812]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 15337641 rs188981497 A G no 6574375
chr3 15337688 rs113923020 A G
MYB
6574376
chr3 15337700 rs712869 A T no 6574377
chr3 15337786 rs113464078 A G
H1TF2 NFE NFIC SRF
6574378
chr3 15337790 rs10558455 CCT C no 6574379
chr3 15337812 rs75813182 A C
SMAD2
6574380
Genes possibly regulated by vista40085[chr3:15337572-15337812]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 15247659 15294425 + CAPN7 ENSG00000131375.5 15247659 0.66 0.99 3441 10087
chr3 15296360 15382875 - SH3BP5 ENSG00000131370.11 15382875 0.69 0.99 3442 54937
Expression level of Genes
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miRNAs possibly regulated by vista40085[chr3:15337572-15337812]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results