EnhancerDB
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  3. vista40089[chr3:15343024-15343227]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40089[chr3:15343024-15343227]
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Tissue distribution of vista40089
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Transcription factor that possibly regulate vista40089[chr3:15343024-15343227]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 15343018 15343029 NFKB1 JASPAR yes 653438
chr3 15343018 15343029 NFKB1 JASPAR yes 70943638
chr3 15343023 15343036 TFAP2B JASPAR yes 653439
chr3 15343023 15343036 TFAP2C JASPAR yes 653440
chr3 15343023 15343036 TFAP2B JASPAR yes 70943639
chr3 15343023 15343036 TFAP2C JASPAR yes 70943640
chr3 15343030 15343051 IRF1 JASPAR yes 653441
chr3 15343030 15343051 IRF1 JASPAR yes 70943641
chr3 15343034 15343048 STAT1 JASPAR yes 653442
chr3 15343034 15343048 STAT1 JASPAR yes 70943642
chr3 15343034 15343049 PRDM1 JASPAR yes 653443
chr3 15343034 15343049 STAT2 JASPAR yes 653444
chr3 15343034 15343049 PRDM1 JASPAR yes 70943643
chr3 15343034 15343049 STAT2 JASPAR yes 70943644
chr3 15343034 15343052 IRF2 JASPAR yes 653445
chr3 15343034 15343052 IRF2 JASPAR yes 70943645
chr3 15343038 15343043 ETS2 TRANSFAC yes 653446
chr3 15343038 15343043 ETS2 TRANSFAC yes 70943646
chr3 15343049 15343061 INSM1 JASPAR yes 653447
chr3 15343049 15343061 INSM1 JASPAR yes 70943647
chr3 15343054 15343064 SP1 JASPAR yes 653448
chr3 15343054 15343064 SP1 JASPAR yes 70943648
chr3 15343076 15343081 SP1 TRANSFAC yes 653449
chr3 15343076 15343081 SP1 TRANSFAC yes 70943649
chr3 15343077 15343087 SP1 JASPAR yes 653450
chr3 15343077 15343087 SP1 JASPAR yes 70943650
chr3 15343090 15343093 MYB TRANSFAC yes 653451
chr3 15343090 15343093 MYB TRANSFAC yes 70943651
chr3 15343091 15343107 SOX8 JASPAR yes 653452
chr3 15343091 15343107 SOX8 JASPAR yes 70943652
chr3 15343094 15343098 YY1 TRANSFAC yes 653453
chr3 15343094 15343098 YY1 TRANSFAC yes 70943653
chr3 15343125 15343130 GATA2 JASPAR yes 653454
chr3 15343125 15343130 GATA2 JASPAR yes 70943654
chr3 15343133 15343138 GATA2 JASPAR yes 653455
chr3 15343133 15343138 GATA2 JASPAR yes 70943655
chr3 15343140 15343144 YY1 TRANSFAC yes 653456
chr3 15343140 15343144 YY1 TRANSFAC yes 70943656
chr3 15343158 15343171 JUN JASPAR yes 653457
chr3 15343158 15343171 JUN JASPAR yes 70943657
chr3 15343163 15343171 FEV JASPAR yes 653458
chr3 15343163 15343171 FEV JASPAR yes 70943658
chr3 15343175 15343188 POU2F2 JASPAR yes 653459
chr3 15343175 15343188 POU2F2 JASPAR yes 70943659
chr3 15343176 15343187 FOXC1 JASPAR yes 653460
chr3 15343176 15343187 FOXC1 JASPAR yes 70943660
chr3 15343219 15343234 PRDM1 JASPAR yes 653461
chr3 15343219 15343234 PRDM1 JASPAR yes 70943661
chr3 15343224 15343242 NR3C1 JASPAR yes 653462
chr3 15343224 15343242 NR3C1 JASPAR yes 70943662
SNP sites on vista40089[chr3:15343024-15343227]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 15343053 rs142422601 A C
INSM1
6574461
chr3 15343055 rs9816187 G A
INSM1 SP1
6574462
chr3 15343141 rs534303127 C T
YY1
6574463
Genes possibly regulated by vista40089[chr3:15343024-15343227]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 15247659 15294425 + CAPN7 ENSG00000131375.5 15247659 0.66 0.99 3441 4635
chr3 15296360 15382875 - SH3BP5 ENSG00000131370.11 15382875 0.69 0.99 3442 60352
Expression level of Genes
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miRNAs possibly regulated by vista40089[chr3:15343024-15343227]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results