EnhancerDB
  1. Home
  2. Enhancers
  3. vista40090[chr3:15344031-15344281]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40090[chr3:15344031-15344281]
Back to top
Tissue distribution of vista40090
Back to top
Transcription factor that possibly regulate vista40090[chr3:15344031-15344281]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 15344034 15344046 IRF1 JASPAR yes 653580
chr3 15344034 15344046 IRF1 JASPAR yes 70943663
chr3 15344037 15344049 FOXI1 JASPAR yes 653581
chr3 15344037 15344049 FOXI1 JASPAR yes 70943664
chr3 15344041 15344047 HiNF-A TRANSFAC yes 653582
chr3 15344041 15344047 HiNF-A TRANSFAC yes 70943665
chr3 15344098 15344104 HiNF-A TRANSFAC yes 653583
chr3 15344098 15344104 HiNF-A TRANSFAC yes 70943666
chr3 15344112 15344122 NFATC3 JASPAR yes 653584
chr3 15344112 15344122 NFATC3 JASPAR yes 70943667
chr3 15344116 15344137 ZNF263 JASPAR yes 653585
chr3 15344116 15344137 ZNF263 JASPAR yes 70943668
chr3 15344131 15344138 SPIB JASPAR yes 653586
chr3 15344131 15344138 SPIB JASPAR yes 70943669
chr3 15344134 15344152 NR3C1 JASPAR yes 653587
chr3 15344134 15344152 NR3C1 JASPAR yes 70943670
chr3 15344170 15344174 NFE TRANSFAC yes 653588
chr3 15344170 15344174 NFE TRANSFAC yes 70943671
chr3 15344170 15344175 GATA1 TRANSFAC yes 653589
chr3 15344170 15344175 GATA1 TRANSFAC yes 70943672
chr3 15344170 15344176 GATA3 JASPAR yes 653590
chr3 15344170 15344176 GATA3 JASPAR yes 70943673
chr3 15344189 15344194 H4TF1 TRANSFAC yes 653591
chr3 15344189 15344194 H4TF1 TRANSFAC yes 70943674
chr3 15344214 15344218 H4TF2 TRANSFAC yes 653592
chr3 15344214 15344218 H4TF2 TRANSFAC yes 70943675
chr3 15344265 15344279 ZIC1 JASPAR yes 653593
chr3 15344265 15344279 ZIC1 JASPAR yes 70943676
chr3 15344280 15344294 NR2F1 JASPAR yes 653594
chr3 15344280 15344294 NR2F1 JASPAR yes 70943677
chr3 15344280 15344296 SOX4 JASPAR yes 653595
chr3 15344280 15344296 SOX8 JASPAR yes 653596
chr3 15344280 15344296 SOX4 JASPAR yes 70943678
chr3 15344280 15344296 SOX8 JASPAR yes 70943679
SNP sites on vista40090[chr3:15344031-15344281]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 15344117 rs372004831 G A
NFATC3 ZNF263
6574472
chr3 15344130 rs181152379 G A
ZNF263
6574473
chr3 15344148 rs138709243 C T
NR3C1
6574474
chr3 15344254 rs7610033 A G no 6574475
Genes possibly regulated by vista40090[chr3:15344031-15344281]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 15247659 15294425 + CAPN7 ENSG00000131375.5 15247659 0.66 0.99 3441 3628
chr3 15296360 15382875 - SH3BP5 ENSG00000131370.11 15382875 0.69 0.99 3442 61406
Expression level of Genes
Back to top
miRNAs possibly regulated by vista40090[chr3:15344031-15344281]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results