EnhancerDB
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  3. vista40093[chr3:15358234-15358387]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40093[chr3:15358234-15358387]
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Tissue distribution of vista40093
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Transcription factor that possibly regulate vista40093[chr3:15358234-15358387]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 15358231 15358246 FOXP1 JASPAR yes 654901
chr3 15358231 15358246 FOXP1 JASPAR yes 70943759
chr3 15358231 15358252 IRF1 JASPAR yes 654902
chr3 15358231 15358252 IRF1 JASPAR yes 70943760
chr3 15358232 15358242 NFATC3 JASPAR yes 654903
chr3 15358232 15358242 NFATC3 JASPAR yes 70943761
chr3 15358234 15358241 NFATC2 JASPAR yes 654904
chr3 15358234 15358241 NFATC2 JASPAR yes 70943762
chr3 15358235 15358250 FOXP1 JASPAR yes 654905
chr3 15358235 15358250 FOXP1 JASPAR yes 70943763
chr3 15358258 15358264 SOX10 JASPAR yes 654906
chr3 15358258 15358264 SOX10 JASPAR yes 70943764
chr3 15358269 15358290 IRF1 JASPAR yes 654907
chr3 15358269 15358290 IRF1 JASPAR yes 70943765
chr3 15358271 15358286 IRF9 JASPAR yes 654908
chr3 15358271 15358286 IRF9 JASPAR yes 70943766
chr3 15358303 15358311 MEIS2 JASPAR yes 654909
chr3 15358303 15358311 MEIS3 JASPAR yes 654910
chr3 15358303 15358311 MEIS2 JASPAR yes 70943767
chr3 15358303 15358311 MEIS3 JASPAR yes 70943768
chr3 15358320 15358324 ESR1 TRANSFAC yes 654911
chr3 15358320 15358324 ESR1 TRANSFAC yes 70943769
chr3 15358353 15358364 NFIL3 JASPAR yes 654912
chr3 15358353 15358364 NFIL3 JASPAR yes 70943770
chr3 15358354 15358366 DBP JASPAR yes 654913
chr3 15358354 15358366 HLF JASPAR yes 654914
chr3 15358354 15358366 TEF JASPAR yes 654915
chr3 15358354 15358366 DBP JASPAR yes 70943771
chr3 15358354 15358366 HLF JASPAR yes 70943772
chr3 15358354 15358366 TEF JASPAR yes 70943773
chr3 15358356 15358367 NFIL3 JASPAR yes 654916
chr3 15358356 15358367 NFIL3 JASPAR yes 70943774
chr3 15358361 15358364 MYB TRANSFAC yes 654917
chr3 15358361 15358364 MYB TRANSFAC yes 70943775
chr3 15358379 15358399 TP53 JASPAR yes 654918
chr3 15358379 15358399 TP53 JASPAR yes 70943776
SNP sites on vista40093[chr3:15358234-15358387]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 15358237 rs11399420 G GA
FOXP1 IRF1 NFATC2 NFATC3
6574678
chr3 15358237 rs397945956 G GA
FOXP1 IRF1 NFATC2 NFATC3
6574679
chr3 15358237 rs397988789 GA G
FOXP1 IRF1 NFATC2 NFATC3
6574680
chr3 15358237 rs5846865 GA G
FOXP1 IRF1 NFATC2 NFATC3
6574681
chr3 15358237 rs763708819 G GA
FOXP1 IRF1 NFATC2 NFATC3
6574682
chr3 15358308 rs138330731 C T
MEIS2 MEIS3
6574683
chr3 15358344 rs6768398 G C no 6574684
Genes possibly regulated by vista40093[chr3:15358234-15358387]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 15296360 15382875 - SH3BP5 ENSG00000131370.11 15382875 0.69 0.99 3442 75512
Expression level of Genes
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miRNAs possibly regulated by vista40093[chr3:15358234-15358387]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results