EnhancerDB
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  3. vista40101[chr3:15598070-15598395]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40101[chr3:15598070-15598395]
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Tissue distribution of vista40101
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Transcription factor that possibly regulate vista40101[chr3:15598070-15598395]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 15598058 15598322 SPI1 UCSC Txn Factor no Conserved 108528379
chr3 15598109 15598373 RUNX3 UCSC Txn Factor no Conserved 108528380
chr3 15598075 15598078 MYB TRANSFAC yes 667658
chr3 15598075 15598078 MYB TRANSFAC yes 70944198
chr3 15598099 15598108 SOX9 JASPAR yes 667659
chr3 15598099 15598108 SOX9 JASPAR yes 70944199
chr3 15598101 15598110 SRY JASPAR yes 667660
chr3 15598101 15598110 SRY JASPAR yes 70944200
chr3 15598106 15598109 MYB TRANSFAC yes 667661
chr3 15598106 15598109 MYB TRANSFAC yes 70944201
chr3 15598123 15598127 YY1 TRANSFAC yes 667662
chr3 15598123 15598127 YY1 TRANSFAC yes 70944202
chr3 15598125 15598135 TBR1 JASPAR yes 667663
chr3 15598125 15598135 TBR1 JASPAR yes 70944203
chr3 15598125 15598136 TBX20 JASPAR yes 667664
chr3 15598125 15598136 TBX2 JASPAR yes 667665
chr3 15598125 15598136 TBX20 JASPAR yes 70944204
chr3 15598125 15598136 TBX2 JASPAR yes 70944205
chr3 15598127 15598130 MYB TRANSFAC yes 667666
chr3 15598127 15598130 MYB TRANSFAC yes 70944206
chr3 15598161 15598176 MEF2A JASPAR yes 667667
chr3 15598161 15598176 MEF2A JASPAR yes 70944207
chr3 15598163 15598175 MEF2D JASPAR yes 667668
chr3 15598163 15598175 MEF2D JASPAR yes 70944208
chr3 15598164 15598174 MEF2A JASPAR yes 667669
chr3 15598164 15598174 MEF2A JASPAR yes 70944209
chr3 15598167 15598188 IRF1 JASPAR yes 667670
chr3 15598167 15598188 IRF1 JASPAR yes 70944210
chr3 15598171 15598185 STAT1 JASPAR yes 667671
chr3 15598171 15598185 STAT1 JASPAR yes 70944211
chr3 15598171 15598186 PRDM1 JASPAR yes 667672
chr3 15598171 15598186 PRDM1 JASPAR yes 70944212
chr3 15598172 15598184 IRF1 JASPAR yes 667673
chr3 15598172 15598184 IRF1 JASPAR yes 70944213
chr3 15598178 15598189 FOXH1 JASPAR yes 667674
chr3 15598178 15598189 FOXH1 JASPAR yes 70944214
chr3 15598187 15598202 NR2C2 JASPAR yes 667675
chr3 15598187 15598202 NR2C2 JASPAR yes 70944215
chr3 15598195 15598210 STAT1 JASPAR yes 667676
chr3 15598195 15598210 STAT1 JASPAR yes 70944216
chr3 15598197 15598208 STAT1 JASPAR yes 667677
chr3 15598197 15598208 STAT1 JASPAR yes 70944217
chr3 15598199 15598210 ELF5 JASPAR yes 667678
chr3 15598199 15598210 ELF5 JASPAR yes 70944218
chr3 15598201 15598209 FEV JASPAR yes 667679
chr3 15598201 15598209 FEV JASPAR yes 70944219
chr3 15598240 15598261 IRF1 JASPAR yes 667680
chr3 15598240 15598261 IRF1 JASPAR yes 70944220
chr3 15598244 15598258 STAT1 JASPAR yes 667681
chr3 15598244 15598258 STAT1 JASPAR yes 70944221
chr3 15598244 15598259 PRDM1 JASPAR yes 667682
chr3 15598244 15598259 STAT2 JASPAR yes 667683
chr3 15598244 15598259 PRDM1 JASPAR yes 70944222
chr3 15598244 15598259 STAT2 JASPAR yes 70944223
chr3 15598244 15598262 IRF2 JASPAR yes 667684
chr3 15598244 15598262 IRF2 JASPAR yes 70944224
chr3 15598259 15598267 FOXL1 JASPAR yes 667685
chr3 15598259 15598267 FOXL1 JASPAR yes 70944225
chr3 15598261 15598279 IRF2 JASPAR yes 667686
chr3 15598261 15598279 IRF2 JASPAR yes 70944226
chr3 15598262 15598283 IRF1 JASPAR yes 667687
chr3 15598262 15598283 IRF1 JASPAR yes 70944227
chr3 15598266 15598280 IRF8 JASPAR yes 667688
chr3 15598266 15598280 IRF8 JASPAR yes 70944228
chr3 15598294 15598304 NKX2-3 JASPAR yes 667689
chr3 15598294 15598304 NKX2-3 JASPAR yes 70944229
chr3 15598316 15598329 EOMES JASPAR yes 667690
chr3 15598316 15598329 EOMES JASPAR yes 70944230
chr3 15598318 15598328 TBR1 JASPAR yes 667691
chr3 15598318 15598328 TBR1 JASPAR yes 70944231
chr3 15598318 15598329 TBX2 JASPAR yes 667692
chr3 15598318 15598329 TBX2 JASPAR yes 70944232
chr3 15598319 15598329 TBX21 JASPAR yes 667693
chr3 15598319 15598329 TBX21 JASPAR yes 70944233
chr3 15598325 15598333 EHF JASPAR yes 667694
chr3 15598325 15598333 EHF JASPAR yes 70944234
SNP sites on vista40101[chr3:15598070-15598395]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 15598170 rs188429590 T C
IRF1 MEF2A MEF2D RUNX3 SPI1
6576008
chr3 15598194 rs545353216 CT C
NR2C2 RUNX3 SPI1
6576009
chr3 15598355 rs139168530 G A
RUNX3
6576010
chr3 15598359 rs77136013 C A,G
RUNX3
6576011
chr3 15598388 rs142980752 C T no 6576012
Genes possibly regulated by vista40101[chr3:15598070-15598395]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 15491640 15563258 - COLQ ENSG00000206561.8 15563258 0.71 1.0 3445 65188
chr3 15602211 15643338 - HACL1 ENSG00000131373.10 15643338 0.68 0.99 3446 55057
chr3 15642848 15687329 + BTD ENSG00000169814.8 15642848 0.77 1.0 3447 55547
Expression level of Genes
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miRNAs possibly regulated by vista40101[chr3:15598070-15598395]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results