EnhancerDB
  1. Home
  2. Enhancers
  3. vista40102[chr3:15599049-15599493]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40102[chr3:15599049-15599493]
Back to top
Tissue distribution of vista40102
Back to top
Transcription factor that possibly regulate vista40102[chr3:15599049-15599493]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 15598934 15599489 CTCF UCSC Txn Factor no Conserved 108528381
chr3 15599050 15599058 MEIS2 JASPAR yes 667796
chr3 15599050 15599058 MEIS2 JASPAR yes 70944235
chr3 15599051 15599055 NFE TRANSFAC yes 667797
chr3 15599051 15599055 NFE TRANSFAC yes 70944236
chr3 15599051 15599058 MEIS1 JASPAR yes 667798
chr3 15599051 15599058 MEIS1 JASPAR yes 70944237
chr3 15599053 15599063 HESX1 JASPAR yes 667799
chr3 15599053 15599063 LHX2 JASPAR yes 667800
chr3 15599053 15599063 RAX JASPAR yes 667801
chr3 15599053 15599063 HESX1 JASPAR yes 70944238
chr3 15599053 15599063 LHX2 JASPAR yes 70944239
chr3 15599053 15599063 RAX JASPAR yes 70944240
chr3 15599054 15599062 LHX9 JASPAR yes 667802
chr3 15599054 15599062 SHOX JASPAR yes 667803
chr3 15599054 15599062 LHX9 JASPAR yes 70944241
chr3 15599054 15599062 SHOX JASPAR yes 70944242
chr3 15599056 15599064 HOXA5 JASPAR yes 667804
chr3 15599056 15599064 HOXA5 JASPAR yes 70944243
chr3 15599060 15599071 ESRRA JASPAR yes 667805
chr3 15599060 15599071 ESRRA JASPAR yes 70944244
chr3 15599073 15599085 GLI2 JASPAR yes 667806
chr3 15599073 15599085 GLI2 JASPAR yes 70944245
chr3 15599087 15599104 RARA JASPAR yes 667807
chr3 15599087 15599104 RARA JASPAR yes 70944246
chr3 15599095 15599114 CTCF JASPAR yes 667808
chr3 15599095 15599114 CTCF JASPAR yes 70944247
chr3 15599098 15599115 RARA JASPAR yes 667809
chr3 15599098 15599115 RARA JASPAR yes 70944248
chr3 15599120 15599123 MYB TRANSFAC yes 667810
chr3 15599120 15599123 MYB TRANSFAC yes 70944249
chr3 15599121 15599139 MAFF JASPAR yes 667811
chr3 15599121 15599139 MAFF JASPAR yes 70944250
chr3 15599122 15599137 MAFK JASPAR yes 667812
chr3 15599122 15599137 MAFK JASPAR yes 70944251
chr3 15599124 15599128 NFE TRANSFAC yes 667813
chr3 15599124 15599128 NFE TRANSFAC yes 70944252
chr3 15599126 15599137 NRL JASPAR yes 667814
chr3 15599126 15599137 NRL JASPAR yes 70944253
chr3 15599131 15599135 YY1 TRANSFAC yes 667815
chr3 15599131 15599135 YY1 TRANSFAC yes 70944254
chr3 15599133 15599148 FOXP1 JASPAR yes 667816
chr3 15599133 15599148 FOXP1 JASPAR yes 70944255
chr3 15599134 15599149 FOXP1 JASPAR yes 667817
chr3 15599134 15599149 FOXP1 JASPAR yes 70944256
chr3 15599163 15599183 PPARG JASPAR yes 667818
chr3 15599163 15599183 PPARG JASPAR yes 70944257
chr3 15599166 15599170 LFA1 TRANSFAC yes 667819
chr3 15599166 15599170 LFA1 TRANSFAC yes 70944258
chr3 15599169 15599173 YY1 TRANSFAC yes 667820
chr3 15599169 15599173 YY1 TRANSFAC yes 70944259
chr3 15599170 15599182 E2F8 JASPAR yes 667821
chr3 15599170 15599182 E2F8 JASPAR yes 70944260
chr3 15599171 15599183 E2F8 JASPAR yes 667822
chr3 15599171 15599183 E2F8 JASPAR yes 70944261
chr3 15599174 15599180 MZF1 JASPAR yes 667823
chr3 15599174 15599180 MZF1 JASPAR yes 70944262
chr3 15599182 15599190 GATA3 JASPAR yes 667824
chr3 15599182 15599190 GATA3 JASPAR yes 70944263
chr3 15599192 15599196 YY1 TRANSFAC yes 667825
chr3 15599192 15599196 YY1 TRANSFAC yes 70944264
chr3 15599199 15599202 MYB TRANSFAC yes 667826
chr3 15599199 15599202 MYB TRANSFAC yes 70944265
chr3 15599243 15599262 CTCF JASPAR yes 667827
chr3 15599243 15599262 CTCF JASPAR yes 70944266
chr3 15599281 15599294 ZBTB18 JASPAR yes 667828
chr3 15599281 15599294 ZBTB18 JASPAR yes 70944267
chr3 15599288 15599296 TBX5 JASPAR yes 667829
chr3 15599288 15599296 TBX5 JASPAR yes 70944268
chr3 15599298 15599319 ZNF263 JASPAR yes 667830
chr3 15599298 15599319 ZNF263 JASPAR yes 70944269
chr3 15599307 15599317 SP1 JASPAR yes 667831
chr3 15599307 15599317 SP1 JASPAR yes 70944270
chr3 15599318 15599331 DUXA JASPAR yes 667832
chr3 15599318 15599331 DUXA JASPAR yes 70944271
chr3 15599319 15599330 DUX4 JASPAR yes 667833
chr3 15599319 15599330 DUX4 JASPAR yes 70944272
chr3 15599336 15599340 NFE TRANSFAC yes 667834
chr3 15599336 15599340 NFE TRANSFAC yes 70944273
chr3 15599337 15599342 GATA2 JASPAR yes 667835
chr3 15599337 15599342 GATA2 JASPAR yes 70944274
chr3 15599355 15599376 ZNF263 JASPAR yes 667836
chr3 15599355 15599376 ZNF263 JASPAR yes 70944275
chr3 15599366 15599379 ELF1 JASPAR yes 667837
chr3 15599366 15599379 ELF1 JASPAR yes 70944276
chr3 15599399 15599405 HiNF-A TRANSFAC yes 667838
chr3 15599399 15599405 HiNF-A TRANSFAC yes 70944277
chr3 15599411 15599431 TP53 JASPAR yes 667839
chr3 15599411 15599431 TP53 JASPAR yes 70944278
chr3 15599423 15599427 NFE TRANSFAC yes 667840
chr3 15599423 15599427 NFE TRANSFAC yes 70944279
chr3 15599424 15599436 INSM1 JASPAR yes 667841
chr3 15599424 15599436 INSM1 JASPAR yes 70944280
chr3 15599429 15599434 SP1 TRANSFAC yes 667842
chr3 15599429 15599434 SP1 TRANSFAC yes 70944281
chr3 15599431 15599442 NFE2L2 JASPAR yes 667843
chr3 15599431 15599442 NFE2L2 JASPAR yes 70944282
chr3 15599443 15599448 GATA1 TRANSFAC yes 667844
chr3 15599443 15599448 GATA1 TRANSFAC yes 70944283
chr3 15599445 15599459 NR2F1 JASPAR yes 667845
chr3 15599445 15599459 NR2F1 JASPAR yes 70944284
chr3 15599454 15599465 TBX20 JASPAR yes 667846
chr3 15599454 15599465 TBX20 JASPAR yes 70944285
chr3 15599471 15599484 SMAD2 JASPAR yes 667847
chr3 15599471 15599484 SMAD2 JASPAR yes 70944286
chr3 15599484 15599496 GLI2 JASPAR yes 667848
chr3 15599484 15599496 GLI2 JASPAR yes 70944287
chr3 15599486 15599506 PPARG JASPAR yes 667849
chr3 15599486 15599506 PPARG JASPAR yes 70944288
chr3 15599490 15599494 ESR1 TRANSFAC yes 667850
chr3 15599490 15599494 ESR1 TRANSFAC yes 70944289
chr3 15599492 15599509 RXRA JASPAR yes 667851
chr3 15599492 15599509 RXRA JASPAR yes 70944290
SNP sites on vista40102[chr3:15599049-15599493]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 15599055 rs17556939 T A
CTCF HESX1 LHX2 LHX9 MEIS1 MEIS2 NFE RAX SHOX
6576022
chr3 15599147 rs10628105 T TGA
CTCF FOXP1
6576023
chr3 15599259 rs11718128 G A
CTCF
6576024
chr3 15599283 rs6781430 T G
CTCF ZBTB18
6576025
chr3 15599405 rs11706669 T C
CTCF HiNF-A
6576026
chr3 15599465 rs143410755 A G
CTCF TBX20
6576027
Genes possibly regulated by vista40102[chr3:15599049-15599493]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 15491640 15563258 - COLQ ENSG00000206561.8 15563258 0.71 1.0 3445 64209
chr3 15602211 15643338 - HACL1 ENSG00000131373.10 15643338 0.68 0.99 3446 56155
chr3 15642848 15687329 + BTD ENSG00000169814.8 15642848 0.77 1.0 3447 56645
Expression level of Genes
Back to top
miRNAs possibly regulated by vista40102[chr3:15599049-15599493]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results