EnhancerDB
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  3. vista40104[chr3:15672231-15672450]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40104[chr3:15672231-15672450]
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Tissue distribution of vista40104
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Transcription factor that possibly regulate vista40104[chr3:15672231-15672450]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 15671638 15672242 CTCF UCSC Txn Factor no Conserved 108528383
chr3 15672034 15672843 TCF7L2 UCSC Txn Factor no Conserved 108528384
chr3 15672247 15672263 POU4F2 JASPAR yes 670017
chr3 15672247 15672263 POU4F3 JASPAR yes 670018
chr3 15672247 15672263 POU4F2 JASPAR yes 70944321
chr3 15672247 15672263 POU4F3 JASPAR yes 70944322
chr3 15672249 15672263 POU4F1 JASPAR yes 670019
chr3 15672249 15672263 POU4F1 JASPAR yes 70944323
chr3 15672251 15672254 MYB TRANSFAC yes 670020
chr3 15672251 15672254 MYB TRANSFAC yes 70944324
chr3 15672261 15672276 RFX5 JASPAR yes 670021
chr3 15672261 15672276 RFX5 JASPAR yes 70944325
chr3 15672262 15672267 MYC TRANSFAC yes 670022
chr3 15672262 15672267 MYC TRANSFAC yes 70944326
chr3 15672274 15672288 PAX6 JASPAR yes 670023
chr3 15672274 15672288 PAX6 JASPAR yes 70944327
chr3 15672290 15672300 MSC JASPAR yes 670024
chr3 15672290 15672300 TFAP4 JASPAR yes 670025
chr3 15672290 15672300 MSC JASPAR yes 70944328
chr3 15672290 15672300 TFAP4 JASPAR yes 70944329
chr3 15672294 15672302 MEIS2 JASPAR yes 670026
chr3 15672294 15672302 MEIS3 JASPAR yes 670027
chr3 15672294 15672302 MEIS2 JASPAR yes 70944330
chr3 15672294 15672302 MEIS3 JASPAR yes 70944331
chr3 15672295 15672299 NFE TRANSFAC yes 670028
chr3 15672295 15672299 NFE TRANSFAC yes 70944332
chr3 15672305 15672320 FOXA1 JASPAR yes 670029
chr3 15672305 15672320 FOXA1 JASPAR yes 70944333
chr3 15672306 15672321 FOXP1 JASPAR yes 670030
chr3 15672306 15672321 FOXP1 JASPAR yes 70944334
chr3 15672307 15672318 FOXP2 JASPAR yes 670031
chr3 15672307 15672318 FOXP2 JASPAR yes 70944335
chr3 15672307 15672321 FOXF2 JASPAR yes 670032
chr3 15672307 15672321 FOXF2 JASPAR yes 70944336
chr3 15672308 15672316 FOXD1 JASPAR yes 670033
chr3 15672308 15672316 FOXG1 JASPAR yes 670034
chr3 15672308 15672316 FOXO3 JASPAR yes 670035
chr3 15672308 15672316 FOXD1 JASPAR yes 70944337
chr3 15672308 15672316 FOXG1 JASPAR yes 70944338
chr3 15672308 15672316 FOXO3 JASPAR yes 70944339
chr3 15672309 15672316 FOXD2 JASPAR yes 670036
chr3 15672309 15672316 FOXI1 JASPAR yes 670037
chr3 15672309 15672316 FOXL1 JASPAR yes 670038
chr3 15672309 15672316 FOXO4 JASPAR yes 670039
chr3 15672309 15672316 FOXO6 JASPAR yes 670040
chr3 15672309 15672316 FOXP3 JASPAR yes 670041
chr3 15672309 15672316 FOXD2 JASPAR yes 70944340
chr3 15672309 15672316 FOXI1 JASPAR yes 70944341
chr3 15672309 15672316 FOXL1 JASPAR yes 70944342
chr3 15672309 15672316 FOXO4 JASPAR yes 70944343
chr3 15672309 15672316 FOXO6 JASPAR yes 70944344
chr3 15672309 15672316 FOXP3 JASPAR yes 70944345
chr3 15672309 15672317 FOXO3 JASPAR yes 670042
chr3 15672309 15672317 FOXO3 JASPAR yes 70944346
chr3 15672309 15672320 FOXA1 JASPAR yes 670043
chr3 15672309 15672320 FOXA1 JASPAR yes 70944347
chr3 15672311 15672329 IRF2 JASPAR yes 670044
chr3 15672311 15672329 IRF2 JASPAR yes 70944348
chr3 15672312 15672326 RXRB JASPAR yes 670045
chr3 15672312 15672326 RXRG JASPAR yes 670046
chr3 15672312 15672326 RXRB JASPAR yes 70944349
chr3 15672312 15672326 RXRG JASPAR yes 70944350
chr3 15672312 15672327 LEF1 JASPAR yes 670047
chr3 15672312 15672327 NR2C2 JASPAR yes 670048
chr3 15672312 15672327 LEF1 JASPAR yes 70944351
chr3 15672312 15672327 NR2C2 JASPAR yes 70944352
chr3 15672324 15672330 ETS1 JASPAR yes 670049
chr3 15672324 15672330 ETS1 JASPAR yes 70944353
chr3 15672330 15672341 NFE2 JASPAR yes 670050
chr3 15672330 15672341 NFE2 JASPAR yes 70944354
chr3 15672331 15672340 JDP2 JASPAR yes 670051
chr3 15672331 15672340 JDP2 JASPAR yes 70944355
chr3 15672334 15672349 LEF1 JASPAR yes 670052
chr3 15672334 15672349 LEF1 JASPAR yes 70944356
chr3 15672357 15672362 SP1 TRANSFAC yes 670053
chr3 15672357 15672362 SP1 TRANSFAC yes 70944357
chr3 15672364 15672373 SRY JASPAR yes 670054
chr3 15672364 15672373 SRY JASPAR yes 70944358
chr3 15672368 15672374 SOX10 JASPAR yes 670055
chr3 15672368 15672374 SOX10 JASPAR yes 70944359
chr3 15672374 15672389 ZBTB33 JASPAR yes 670056
chr3 15672374 15672389 ZBTB33 JASPAR yes 70944360
chr3 15672407 15672419 INSM1 JASPAR yes 670057
chr3 15672407 15672419 INSM1 JASPAR yes 70944361
chr3 15672412 15672417 SP1 TRANSFAC yes 670058
chr3 15672412 15672417 SP1 TRANSFAC yes 70944362
chr3 15672412 15672419 SP1 TRANSFAC yes 670059
chr3 15672412 15672419 SP1 TRANSFAC yes 70944363
chr3 15672418 15672422 ESR1 TRANSFAC yes 670060
chr3 15672418 15672422 ESR1 TRANSFAC yes 70944364
chr3 15672418 15672435 PAX9 JASPAR yes 670061
chr3 15672418 15672435 PAX9 JASPAR yes 70944365
chr3 15672439 15672459 TBX19 JASPAR yes 670062
chr3 15672439 15672459 TBX19 JASPAR yes 70944366
chr3 15672441 15672457 T JASPAR yes 670063
chr3 15672441 15672457 T JASPAR yes 70944367
SNP sites on vista40104[chr3:15672231-15672450]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 15672425 rs111955505 G A
PAX9 TCF7L2
6576224
Genes possibly regulated by vista40104[chr3:15672231-15672450]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 15602211 15643338 - HACL1 ENSG00000131373.10 15643338 0.68 0.99 3446 71107
chr3 15642848 15687329 + BTD ENSG00000169814.8 15642848 0.77 1.0 3447 70617
Expression level of Genes
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miRNAs possibly regulated by vista40104[chr3:15672231-15672450]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results