EnhancerDB
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  3. vista40109[chr3:15702831-15703150]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40109[chr3:15702831-15703150]
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Tissue distribution of vista40109
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Transcription factor that possibly regulate vista40109[chr3:15702831-15703150]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 15702835 15702839 YY1 TRANSFAC yes 672695
chr3 15702835 15702839 YY1 TRANSFAC yes 70944654
chr3 15702855 15702865 RELA JASPAR yes 672696
chr3 15702855 15702865 RELA JASPAR yes 70944655
chr3 15702865 15702883 NFYA JASPAR yes 672697
chr3 15702865 15702883 NFYA JASPAR yes 70944656
chr3 15702870 15702880 ALX3 JASPAR yes 672698
chr3 15702870 15702880 ESX1 JASPAR yes 672699
chr3 15702870 15702880 GBX1 JASPAR yes 672700
chr3 15702870 15702880 GBX2 JASPAR yes 672701
chr3 15702870 15702880 GSX1 JASPAR yes 672702
chr3 15702870 15702880 GSX2 JASPAR yes 672703
chr3 15702870 15702880 HESX1 JASPAR yes 672704
chr3 15702870 15702880 HOXB3 JASPAR yes 672705
chr3 15702870 15702880 LBX2 JASPAR yes 672706
chr3 15702870 15702880 LHX2 JASPAR yes 672707
chr3 15702870 15702880 MIXL1 JASPAR yes 672708
chr3 15702870 15702880 RAX JASPAR yes 672709
chr3 15702870 15702880 ALX3 JASPAR yes 70944657
chr3 15702870 15702880 ESX1 JASPAR yes 70944658
chr3 15702870 15702880 GBX1 JASPAR yes 70944659
chr3 15702870 15702880 GBX2 JASPAR yes 70944660
chr3 15702870 15702880 GSX1 JASPAR yes 70944661
chr3 15702870 15702880 GSX2 JASPAR yes 70944662
chr3 15702870 15702880 HESX1 JASPAR yes 70944663
chr3 15702870 15702880 HOXB3 JASPAR yes 70944664
chr3 15702870 15702880 LBX2 JASPAR yes 70944665
chr3 15702870 15702880 LHX2 JASPAR yes 70944666
chr3 15702870 15702880 MIXL1 JASPAR yes 70944667
chr3 15702870 15702880 RAX JASPAR yes 70944668
chr3 15702871 15702879 BARX1 JASPAR yes 672710
chr3 15702871 15702879 BSX JASPAR yes 672711
chr3 15702871 15702879 EN1 JASPAR yes 672712
chr3 15702871 15702879 ISX JASPAR yes 672713
chr3 15702871 15702879 LHX9 JASPAR yes 672714
chr3 15702871 15702879 MSX1 JASPAR yes 672715
chr3 15702871 15702879 MSX2 JASPAR yes 672716
chr3 15702871 15702879 PRRX1 JASPAR yes 672717
chr3 15702871 15702879 RAX2 JASPAR yes 672718
chr3 15702871 15702879 SHOX JASPAR yes 672719
chr3 15702871 15702879 BARX1 JASPAR yes 70944669
chr3 15702871 15702879 BSX JASPAR yes 70944670
chr3 15702871 15702879 EN1 JASPAR yes 70944671
chr3 15702871 15702879 ISX JASPAR yes 70944672
chr3 15702871 15702879 LHX9 JASPAR yes 70944673
chr3 15702871 15702879 MSX1 JASPAR yes 70944674
chr3 15702871 15702879 MSX2 JASPAR yes 70944675
chr3 15702871 15702879 PRRX1 JASPAR yes 70944676
chr3 15702871 15702879 RAX2 JASPAR yes 70944677
chr3 15702871 15702879 SHOX JASPAR yes 70944678
chr3 15702871 15702880 VENTX JASPAR yes 672720
chr3 15702871 15702880 VENTX JASPAR yes 70944679
chr3 15702871 15702886 NFYB JASPAR yes 672721
chr3 15702871 15702886 NFYB JASPAR yes 70944680
chr3 15702894 15702898 YY1 TRANSFAC yes 672722
chr3 15702894 15702898 YY1 TRANSFAC yes 70944681
chr3 15702896 15702902 TCF4 TRANSFAC yes 672723
chr3 15702896 15702902 TCF4 TRANSFAC yes 70944682
chr3 15702924 15702928 YY1 TRANSFAC yes 672724
chr3 15702924 15702928 YY1 TRANSFAC yes 70944683
chr3 15702924 15702937 POU2F2 JASPAR yes 672725
chr3 15702924 15702937 POU2F2 JASPAR yes 70944684
chr3 15702930 15702944 POU1F1 JASPAR yes 672726
chr3 15702930 15702944 POU1F1 JASPAR yes 70944685
chr3 15702932 15702944 POU2F1 JASPAR yes 672727
chr3 15702932 15702944 POU2F1 JASPAR yes 70944686
chr3 15702932 15702945 POU3F3 JASPAR yes 672728
chr3 15702932 15702945 POU3F3 JASPAR yes 70944687
chr3 15702932 15702946 POU1F1 JASPAR yes 672729
chr3 15702932 15702946 POU1F1 JASPAR yes 70944688
chr3 15702933 15702945 POU3F1 JASPAR yes 672730
chr3 15702933 15702945 POU3F2 JASPAR yes 672731
chr3 15702933 15702945 POU3F1 JASPAR yes 70944689
chr3 15702933 15702945 POU3F2 JASPAR yes 70944690
chr3 15702934 15702943 POU3F4 JASPAR yes 672732
chr3 15702934 15702943 POU5F1B JASPAR yes 672733
chr3 15702934 15702943 POU3F4 JASPAR yes 70944691
chr3 15702934 15702943 POU5F1B JASPAR yes 70944692
chr3 15702940 15702944 YY1 TRANSFAC yes 672734
chr3 15702940 15702944 YY1 TRANSFAC yes 70944693
chr3 15702944 15702959 SCRT1 JASPAR yes 672735
chr3 15702944 15702959 SCRT1 JASPAR yes 70944694
chr3 15702945 15702955 FIGLA JASPAR yes 672736
chr3 15702945 15702955 FIGLA JASPAR yes 70944695
chr3 15702946 15702955 SNAI2 JASPAR yes 672737
chr3 15702946 15702955 SNAI2 JASPAR yes 70944696
chr3 15702947 15702952 USF2 TRANSFAC yes 672738
chr3 15702947 15702952 USF2 TRANSFAC yes 70944697
chr3 15702952 15702957 GATA1 TRANSFAC yes 672739
chr3 15702952 15702957 GATA1 TRANSFAC yes 70944698
chr3 15702987 15702991 H4TF2 TRANSFAC yes 672740
chr3 15702987 15702991 H4TF2 TRANSFAC yes 70944699
chr3 15702990 15702994 H1TF2 TRANSFAC yes 672741
chr3 15702990 15702994 NFE TRANSFAC yes 672742
chr3 15702990 15702994 SRF TRANSFAC yes 672743
chr3 15702990 15702994 H1TF2 TRANSFAC yes 70944700
chr3 15702990 15702994 NFE TRANSFAC yes 70944701
chr3 15702990 15702994 SRF TRANSFAC yes 70944702
chr3 15703016 15703020 YY1 TRANSFAC yes 672744
chr3 15703016 15703020 YY1 TRANSFAC yes 70944703
chr3 15703037 15703043 LEF1 TRANSFAC yes 672745
chr3 15703037 15703043 SOX10 JASPAR yes 672746
chr3 15703037 15703043 LEF1 TRANSFAC yes 70944704
chr3 15703037 15703043 SOX10 JASPAR yes 70944705
chr3 15703044 15703048 YY1 TRANSFAC yes 672747
chr3 15703044 15703048 YY1 TRANSFAC yes 70944706
chr3 15703050 15703055 GATA2 JASPAR yes 672748
chr3 15703050 15703055 GATA2 JASPAR yes 70944707
chr3 15703064 15703069 GATA2 JASPAR yes 672749
chr3 15703064 15703069 GATA2 JASPAR yes 70944708
chr3 15703070 15703081 CEBPA JASPAR yes 672750
chr3 15703070 15703081 CEBPA JASPAR yes 70944709
SNP sites on vista40109[chr3:15702831-15703150]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 15702921 rs113509828 G A no 6576528
chr3 15702947 rs59574954 C A
FIGLA SCRT1 SNAI2 USF2
6576529
chr3 15702951 rs201511073 CT C
FIGLA SCRT1 SNAI2 USF2
6576530
chr3 15702987 rs372772704 TG T
H4TF2
6576531
chr3 15702987 rs569706302 TG T
H4TF2
6576532
chr3 15702990 rs541314329 T C
H1TF2 H4TF2 NFE SRF
6576533
chr3 15702998 rs2455803 T A no 6576534
Genes possibly regulated by vista40109[chr3:15702831-15703150]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 15602211 15643338 - HACL1 ENSG00000131373.10 15643338 0.68 0.99 3446 40507
chr3 15642848 15687329 + BTD ENSG00000169814.8 15642848 0.77 1.0 3447 40017
Expression level of Genes
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miRNAs possibly regulated by vista40109[chr3:15702831-15703150]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results