EnhancerDB
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  3. vista4012[chr1:177131482-177131884]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4012[chr1:177131482-177131884]
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Tissue distribution of vista4012
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Transcription factor that possibly regulate vista4012[chr1:177131482-177131884]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 177131494 177131508 ONECUT1 JASPAR yes 118404346
chr1 177131494 177131508 ONECUT2 JASPAR yes 118404347
chr1 177131494 177131508 ONECUT3 JASPAR yes 118404348
chr1 177131497 177131507 CUX1 JASPAR yes 118404349
chr1 177131497 177131507 CUX2 JASPAR yes 118404350
chr1 177131506 177131510 YY1 TRANSFAC yes 118404351
chr1 177131507 177131516 POU5F1B JASPAR yes 118404352
chr1 177131507 177131517 MEF2A JASPAR yes 118404353
chr1 177131564 177131574 NFIA JASPAR yes 118404354
chr1 177131566 177131572 NFIC JASPAR yes 118404355
chr1 177131572 177131583 CEBPA JASPAR yes 118404356
chr1 177131577 177131596 RFX2 JASPAR yes 118404357
chr1 177131581 177131597 RFX2 JASPAR yes 118404358
chr1 177131581 177131597 RFX3 JASPAR yes 118404359
chr1 177131581 177131597 RFX4 JASPAR yes 118404360
chr1 177131581 177131597 RFX5 JASPAR yes 118404361
chr1 177131582 177131591 POU3F4 JASPAR yes 118404362
chr1 177131582 177131591 POU5F1B JASPAR yes 118404363
chr1 177131582 177131601 RFX2 JASPAR yes 118404364
chr1 177131584 177131599 RFX5 JASPAR yes 118404365
chr1 177131615 177131619 LFA1 TRANSFAC yes 118404366
chr1 177131639 177131651 GRHL1 JASPAR yes 118404367
chr1 177131651 177131655 TEAD2 TRANSFAC yes 118404368
chr1 177131652 177131664 TAL1 JASPAR yes 118404369
chr1 177131653 177131656 MYB TRANSFAC yes 118404370
chr1 177131653 177131666 ZBTB18 JASPAR yes 118404371
chr1 177131661 177131676 PRDM1 JASPAR yes 118404372
chr1 177131679 177131696 BCL6B JASPAR yes 118404373
chr1 177131704 177131708 YY1 TRANSFAC yes 118404374
chr1 177131736 177131742 HiNF-A TRANSFAC yes 118404375
chr1 177131802 177131816 FOXF2 JASPAR yes 118404376
chr1 177131802 177131817 FOXP1 JASPAR yes 118404377
chr1 177131803 177131814 FOXA1 JASPAR yes 118404378
chr1 177131803 177131818 FOXA1 JASPAR yes 118404379
chr1 177131805 177131816 FOXP2 JASPAR yes 118404380
chr1 177131807 177131814 FOXD2 JASPAR yes 118404381
chr1 177131807 177131814 FOXI1 JASPAR yes 118404382
chr1 177131807 177131814 FOXL1 JASPAR yes 118404383
chr1 177131807 177131814 FOXO4 JASPAR yes 118404384
chr1 177131807 177131814 FOXO6 JASPAR yes 118404385
chr1 177131807 177131814 FOXP3 JASPAR yes 118404386
chr1 177131807 177131815 FOXD1 JASPAR yes 118404387
chr1 177131807 177131815 FOXG1 JASPAR yes 118404388
chr1 177131807 177131815 FOXO3 JASPAR yes 118404389
chr1 177131845 177131851 HiNF-A TRANSFAC yes 118404390
SNP sites on vista4012[chr1:177131482-177131884]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 177131485 rs375279520 G C no 747990
chr1 177131583 rs12039332 A G
CEBPA POU3F4 POU5F1B RFX2 RFX3 RFX4 RFX5
747991
chr1 177131831 rs547819251 A G no 747992
chr1 177131865 rs144445284 C T no 747993
chr1 177131878 rs116752381 A G no 747994
Genes possibly regulated by vista4012[chr1:177131482-177131884]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 176826438 177134109 - ASTN1 ENSG00000152092.11 177134109 0.96 1.0 1595 97775
chr1 177140633 177251558 + BRINP2 ENSG00000198797.6 177140633 0.98 0.94 1596 91251
Expression level of Genes
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miRNAs possibly regulated by vista4012[chr1:177131482-177131884]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr1 176998510 176998530 - hsa-miR-488-3p MIMAT0004763 177133842 0.04044444444444444 0.821413 0.0 100
Expression level of miRNAs
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