EnhancerDB
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  3. vista40125[chr3:16106573-16106816]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40125[chr3:16106573-16106816]
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Tissue distribution of vista40125
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Transcription factor that possibly regulate vista40125[chr3:16106573-16106816]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 16106554 16106573 REST JASPAR yes 697010
chr3 16106554 16106573 REST JASPAR yes 70945533
chr3 16106563 16106575 PKNOX1 JASPAR yes 697012
chr3 16106563 16106575 PKNOX2 JASPAR yes 697013
chr3 16106563 16106575 TGIF1 JASPAR yes 697014
chr3 16106563 16106575 TGIF2 JASPAR yes 697015
chr3 16106563 16106575 PKNOX1 JASPAR yes 70945534
chr3 16106563 16106575 PKNOX2 JASPAR yes 70945535
chr3 16106563 16106575 TGIF1 JASPAR yes 70945536
chr3 16106563 16106575 TGIF2 JASPAR yes 70945537
chr3 16106571 16106585 RORA JASPAR yes 697016
chr3 16106571 16106585 RORA JASPAR yes 70945538
chr3 16106591 16106596 ETS2 TRANSFAC yes 697017
chr3 16106591 16106596 ETS2 TRANSFAC yes 70945539
chr3 16106594 16106609 LEF1 JASPAR yes 697018
chr3 16106594 16106609 LEF1 JASPAR yes 70945540
chr3 16106605 16106608 MYB TRANSFAC yes 697019
chr3 16106605 16106608 MYB TRANSFAC yes 70945541
chr3 16106607 16106625 SRF JASPAR yes 697020
chr3 16106607 16106625 SRF JASPAR yes 70945542
chr3 16106612 16106626 GATA2 JASPAR yes 697021
chr3 16106612 16106626 GATA2 JASPAR yes 70945543
chr3 16106614 16106622 GATA3 JASPAR yes 697022
chr3 16106614 16106622 GATA5 JASPAR yes 697023
chr3 16106614 16106622 GATA3 JASPAR yes 70945544
chr3 16106614 16106622 GATA5 JASPAR yes 70945545
chr3 16106614 16106628 STAT1 JASPAR yes 697024
chr3 16106614 16106628 STAT1 JASPAR yes 70945546
chr3 16106614 16106629 STAT2 JASPAR yes 697025
chr3 16106614 16106629 STAT2 JASPAR yes 70945547
chr3 16106618 16106623 ETS2 TRANSFAC yes 697026
chr3 16106618 16106623 ETS2 TRANSFAC yes 70945548
chr3 16106637 16106647 PAX3 JASPAR yes 697027
chr3 16106637 16106647 PAX7 JASPAR yes 697028
chr3 16106637 16106647 PAX3 JASPAR yes 70945549
chr3 16106637 16106647 PAX7 JASPAR yes 70945550
chr3 16106639 16106649 EMX1 JASPAR yes 697029
chr3 16106639 16106649 HESX1 JASPAR yes 697030
chr3 16106639 16106649 LHX6 JASPAR yes 697031
chr3 16106639 16106649 MNX1 JASPAR yes 697032
chr3 16106639 16106649 POU6F1 JASPAR yes 697033
chr3 16106639 16106649 RAX JASPAR yes 697034
chr3 16106639 16106649 EMX1 JASPAR yes 70945551
chr3 16106639 16106649 HESX1 JASPAR yes 70945552
chr3 16106639 16106649 LHX6 JASPAR yes 70945553
chr3 16106639 16106649 MNX1 JASPAR yes 70945554
chr3 16106639 16106649 POU6F1 JASPAR yes 70945555
chr3 16106639 16106649 RAX JASPAR yes 70945556
chr3 16106640 16106648 LMX1A JASPAR yes 697035
chr3 16106640 16106648 LMX1B JASPAR yes 697036
chr3 16106640 16106648 NKX6-1 JASPAR yes 697037
chr3 16106640 16106648 NKX6-2 JASPAR yes 697038
chr3 16106640 16106648 VAX1 JASPAR yes 697039
chr3 16106640 16106648 VAX2 JASPAR yes 697040
chr3 16106640 16106648 VSX1 JASPAR yes 697041
chr3 16106640 16106648 VSX2 JASPAR yes 697042
chr3 16106640 16106648 LMX1A JASPAR yes 70945557
chr3 16106640 16106648 LMX1B JASPAR yes 70945558
chr3 16106640 16106648 NKX6-1 JASPAR yes 70945559
chr3 16106640 16106648 NKX6-2 JASPAR yes 70945560
chr3 16106640 16106648 VAX1 JASPAR yes 70945561
chr3 16106640 16106648 VAX2 JASPAR yes 70945562
chr3 16106640 16106648 VSX1 JASPAR yes 70945563
chr3 16106640 16106648 VSX2 JASPAR yes 70945564
chr3 16106640 16106650 POU6F2 JASPAR yes 697043
chr3 16106640 16106650 POU6F2 JASPAR yes 70945565
chr3 16106655 16106663 NR4A2 JASPAR yes 697044
chr3 16106655 16106663 NR4A2 JASPAR yes 70945566
chr3 16106657 16106661 ESR1 TRANSFAC yes 697045
chr3 16106657 16106661 ESR1 TRANSFAC yes 70945567
chr3 16106669 16106679 BARHL2 JASPAR yes 697046
chr3 16106669 16106679 BARHL2 JASPAR yes 70945568
chr3 16106698 16106713 RUNX2 JASPAR yes 697047
chr3 16106698 16106713 RUNX2 JASPAR yes 70945569
chr3 16106710 16106725 STAT1 JASPAR yes 697048
chr3 16106710 16106725 STAT1 JASPAR yes 70945570
chr3 16106712 16106723 STAT1 JASPAR yes 697049
chr3 16106712 16106723 STAT1 JASPAR yes 70945571
chr3 16106724 16106739 JUND JASPAR yes 697050
chr3 16106724 16106739 JUND JASPAR yes 70945572
chr3 16106725 16106738 JUN JASPAR yes 697051
chr3 16106725 16106738 JUN JASPAR yes 70945573
chr3 16106727 16106739 JDP2 JASPAR yes 697052
chr3 16106727 16106739 JDP2 JASPAR yes 70945574
chr3 16106733 16106754 REST JASPAR yes 697053
chr3 16106733 16106754 REST JASPAR yes 70945575
chr3 16106734 16106753 REST JASPAR yes 697054
chr3 16106734 16106753 REST JASPAR yes 70945576
chr3 16106753 16106767 TLX1 JASPAR yes 697055
chr3 16106753 16106767 TLX1 JASPAR yes 70945577
chr3 16106754 16106768 TLX1 JASPAR yes 697056
chr3 16106754 16106768 TLX1 JASPAR yes 70945578
chr3 16106762 16106768 TCF4 TRANSFAC yes 697057
chr3 16106762 16106768 TCF4 TRANSFAC yes 70945579
chr3 16106778 16106799 IRF1 JASPAR yes 697058
chr3 16106778 16106799 IRF1 JASPAR yes 70945580
chr3 16106782 16106797 PRDM1 JASPAR yes 697059
chr3 16106782 16106797 PRDM1 JASPAR yes 70945581
chr3 16106782 16106803 ZNF263 JASPAR yes 697060
chr3 16106782 16106803 ZNF263 JASPAR yes 70945582
chr3 16106787 16106793 TCF4 TRANSFAC yes 697061
chr3 16106787 16106793 TCF4 TRANSFAC yes 70945583
chr3 16106790 16106804 TCF7L2 JASPAR yes 697062
chr3 16106790 16106804 TCF7L2 JASPAR yes 70945584
chr3 16106790 16106805 LEF1 JASPAR yes 697063
chr3 16106790 16106805 LEF1 JASPAR yes 70945585
chr3 16106797 16106818 ZNF263 JASPAR yes 697064
chr3 16106797 16106818 ZNF263 JASPAR yes 70945586
SNP sites on vista40125[chr3:16106573-16106816]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 16106626 rs35874403 C T
GATA2 STAT1 STAT2
6578687
chr3 16106637 rs73820716 G A
PAX3 PAX7
6578688
chr3 16106701 rs12492464 T C
RUNX2
6578689
Genes possibly regulated by vista40125[chr3:16106573-16106816]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista40125[chr3:16106573-16106816]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results