EnhancerDB
  1. Home
  2. Enhancers
  3. vista4013[chr1:177142101-177142380]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4013[chr1:177142101-177142380]
Back to top
Tissue distribution of vista4013
Back to top
Transcription factor that possibly regulate vista4013[chr1:177142101-177142380]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 177142129 177142145 SOX4 JASPAR yes 118404391
chr1 177142130 177142145 SOX21 JASPAR yes 118404392
chr1 177142144 177142147 MYB TRANSFAC yes 118404393
chr1 177142169 177142183 EBF1 JASPAR yes 118404394
chr1 177142170 177142182 TFAP2C JASPAR yes 118404395
chr1 177142170 177142183 TFAP2A JASPAR yes 118404396
chr1 177142170 177142183 TFAP2B JASPAR yes 118404397
chr1 177142170 177142183 TFAP2C JASPAR yes 118404398
chr1 177142171 177142184 TFAP2A JASPAR yes 118404399
chr1 177142171 177142184 TFAP2B JASPAR yes 118404400
chr1 177142171 177142184 TFAP2C JASPAR yes 118404401
chr1 177142179 177142183 LFA1 TRANSFAC yes 118404402
chr1 177142185 177142200 JUND JASPAR yes 118404403
chr1 177142186 177142199 DUXA JASPAR yes 118404404
chr1 177142187 177142201 BATF3 JASPAR yes 118404405
chr1 177142188 177142200 JDP2 JASPAR yes 118404406
chr1 177142189 177142202 JUN JASPAR yes 118404407
chr1 177142190 177142197 JUN TRANSFAC yes 118404408
chr1 177142190 177142202 PKNOX2 JASPAR yes 118404409
chr1 177142230 177142241 E2F6 JASPAR yes 118404410
chr1 177142238 177142249 FOS JASPAR yes 118404411
chr1 177142238 177142249 FOSL1 JASPAR yes 118404412
chr1 177142238 177142249 JUND JASPAR yes 118404413
chr1 177142239 177142250 FOSL2 JASPAR yes 118404414
chr1 177142239 177142250 JUNB JASPAR yes 118404415
chr1 177142239 177142253 JUN JASPAR yes 118404416
chr1 177142242 177142262 TBX19 JASPAR yes 118404417
chr1 177142244 177142260 T JASPAR yes 118404418
chr1 177142249 177142254 MYC TRANSFAC yes 118404419
chr1 177142261 177142273 FOXI1 JASPAR yes 118404420
chr1 177142264 177142268 YY1 TRANSFAC yes 118404421
chr1 177142266 177142275 SRY JASPAR yes 118404422
chr1 177142276 177142294 RARA JASPAR yes 118404423
chr1 177142287 177142298 NFKB1 JASPAR yes 118404424
chr1 177142292 177142307 NR2C2 JASPAR yes 118404425
chr1 177142319 177142340 REST JASPAR yes 118404426
chr1 177142330 177142334 LFA1 TRANSFAC yes 118404427
chr1 177142362 177142366 NFE TRANSFAC yes 118404428
chr1 177142365 177142373 GATA5 JASPAR yes 118404429
chr1 177142367 177142377 CUX1 JASPAR yes 118404430
chr1 177142367 177142377 CUX2 JASPAR yes 118404431
SNP sites on vista4013[chr1:177142101-177142380]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 177142106 rs10913294 C T no 747999
chr1 177142111 rs115173135 A G no 748000
chr1 177142136 rs34599247 T C
SOX21 SOX4
748001
chr1 177142178 rs76455872 G A
EBF1 TFAP2A TFAP2B TFAP2C
748002
chr1 177142226 rs564477856 G C no 748003
Genes possibly regulated by vista4013[chr1:177142101-177142380]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 176826438 177134109 - ASTN1 ENSG00000152092.11 177134109 0.96 1.0 1595 92008
chr1 177140633 177251558 + BRINP2 ENSG00000198797.6 177140633 0.98 0.94 1596 98532
Expression level of Genes
Back to top
miRNAs possibly regulated by vista4013[chr1:177142101-177142380]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results