EnhancerDB
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  3. vista40130[chr3:16171559-16171808]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40130[chr3:16171559-16171808]
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Tissue distribution of vista40130
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Transcription factor that possibly regulate vista40130[chr3:16171559-16171808]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 16171569 16171589 TP53 JASPAR yes 704351
chr3 16171569 16171589 TP53 JASPAR yes 70945758
chr3 16171656 16171674 RARA JASPAR yes 704352
chr3 16171656 16171674 RARA JASPAR yes 70945759
chr3 16171657 16171671 RXRG JASPAR yes 704353
chr3 16171657 16171671 RXRG JASPAR yes 70945760
chr3 16171664 16171678 RXRB JASPAR yes 704354
chr3 16171664 16171678 RXRG JASPAR yes 704355
chr3 16171664 16171678 RXRB JASPAR yes 70945761
chr3 16171664 16171678 RXRG JASPAR yes 70945762
chr3 16171736 16171745 SOX9 JASPAR yes 704356
chr3 16171736 16171745 SOX9 JASPAR yes 70945763
chr3 16171742 16171753 FLI1 JASPAR yes 704357
chr3 16171742 16171753 FLI1 JASPAR yes 70945764
chr3 16171744 16171751 SPI1 JASPAR yes 704358
chr3 16171744 16171751 SPI1 JASPAR yes 70945765
chr3 16171744 16171752 EHF JASPAR yes 704359
chr3 16171744 16171752 EHF JASPAR yes 70945766
chr3 16171746 16171753 SPIB JASPAR yes 704360
chr3 16171746 16171753 SPIB JASPAR yes 70945767
chr3 16171751 16171766 HSF1 JASPAR yes 704361
chr3 16171751 16171766 HSF1 JASPAR yes 70945768
chr3 16171757 16171770 HSF1 JASPAR yes 704362
chr3 16171757 16171770 HSF1 JASPAR yes 70945769
chr3 16171761 16171775 NR2F1 JASPAR yes 704363
chr3 16171761 16171775 NR2F1 JASPAR yes 70945770
chr3 16171784 16171788 YY1 TRANSFAC yes 704364
chr3 16171784 16171788 YY1 TRANSFAC yes 70945771
chr3 16171789 16171799 SREBF1 JASPAR yes 704365
chr3 16171789 16171799 SREBF2 JASPAR yes 704366
chr3 16171789 16171799 TBX21 JASPAR yes 704367
chr3 16171789 16171799 SREBF1 JASPAR yes 70945772
chr3 16171789 16171799 SREBF2 JASPAR yes 70945773
chr3 16171789 16171799 TBX21 JASPAR yes 70945774
chr3 16171789 16171802 EOMES JASPAR yes 704368
chr3 16171789 16171802 EOMES JASPAR yes 70945775
chr3 16171790 16171798 MGA JASPAR yes 704369
chr3 16171790 16171798 MGA JASPAR yes 70945776
chr3 16171796 16171815 REST JASPAR yes 704370
chr3 16171796 16171815 REST JASPAR yes 70945777
chr3 16171799 16171803 NFE TRANSFAC yes 704371
chr3 16171799 16171803 NFE TRANSFAC yes 70945778
chr3 16171805 16171820 PRDM1 JASPAR yes 704372
chr3 16171805 16171820 STAT2 JASPAR yes 704373
chr3 16171805 16171820 PRDM1 JASPAR yes 70945779
chr3 16171805 16171820 STAT2 JASPAR yes 70945780
chr3 16171806 16171820 STAT1 JASPAR yes 704374
chr3 16171806 16171820 STAT1 JASPAR yes 70945781
SNP sites on vista40130[chr3:16171559-16171808]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 16171666 rs80152911 G C
RARA RXRB RXRG
6579374
chr3 16171754 rs79257350 G A
HSF1
6579375
chr3 16171798 rs182399103 A T
EOMES MGA REST SREBF1 SREBF2 TBX21
6579376
Genes possibly regulated by vista40130[chr3:16171559-16171808]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 16216156 16273499 + GALNT15 ENSG00000131386.13 16216156 0.91 1.0 3449 55652
Expression level of Genes
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miRNAs possibly regulated by vista40130[chr3:16171559-16171808]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results