EnhancerDB
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  3. vista40132[chr3:16218160-16218375]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40132[chr3:16218160-16218375]
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Tissue distribution of vista40132
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Transcription factor that possibly regulate vista40132[chr3:16218160-16218375]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 16218146 16218162 RFX3 JASPAR yes 708005
chr3 16218146 16218162 RFX4 JASPAR yes 708006
chr3 16218146 16218162 RFX3 JASPAR yes 70945820
chr3 16218146 16218162 RFX4 JASPAR yes 70945821
chr3 16218152 16218162 HMBOX1 JASPAR yes 708007
chr3 16218152 16218162 HMBOX1 JASPAR yes 70945822
chr3 16218157 16218168 GCM1 JASPAR yes 708008
chr3 16218157 16218168 GCM1 JASPAR yes 70945823
chr3 16218158 16218168 GCM2 JASPAR yes 708009
chr3 16218158 16218168 GCM2 JASPAR yes 70945824
chr3 16218185 16218206 IRF1 JASPAR yes 708010
chr3 16218185 16218206 IRF1 JASPAR yes 70945825
chr3 16218186 16218198 MEF2A JASPAR yes 708011
chr3 16218186 16218198 MEF2D JASPAR yes 708012
chr3 16218186 16218198 MEF2A JASPAR yes 70945826
chr3 16218186 16218198 MEF2D JASPAR yes 70945827
chr3 16218187 16218202 STAT2 JASPAR yes 708013
chr3 16218187 16218202 STAT2 JASPAR yes 70945828
chr3 16218189 16218201 IRF1 JASPAR yes 708014
chr3 16218189 16218201 IRF1 JASPAR yes 70945829
chr3 16218189 16218203 IRF7 JASPAR yes 708015
chr3 16218189 16218203 IRF7 JASPAR yes 70945830
chr3 16218189 16218204 IRF9 JASPAR yes 708016
chr3 16218189 16218204 IRF9 JASPAR yes 70945831
chr3 16218192 16218212 RREB1 JASPAR yes 708017
chr3 16218192 16218212 RREB1 JASPAR yes 70945832
chr3 16218209 16218213 H4TF2 TRANSFAC yes 708018
chr3 16218209 16218213 H4TF2 TRANSFAC yes 70945833
chr3 16218251 16218268 BCL6B JASPAR yes 708019
chr3 16218251 16218268 BCL6B JASPAR yes 70945834
chr3 16218252 16218267 STAT1 JASPAR yes 708020
chr3 16218252 16218267 STAT1 JASPAR yes 70945835
chr3 16218254 16218265 STAT1 JASPAR yes 708021
chr3 16218254 16218265 STAT3 JASPAR yes 708022
chr3 16218254 16218265 STAT1 JASPAR yes 70945836
chr3 16218254 16218265 STAT3 JASPAR yes 70945837
chr3 16218261 16218272 FOXA1 JASPAR yes 708023
chr3 16218261 16218272 FOXA1 JASPAR yes 70945838
chr3 16218261 16218276 FOXA1 JASPAR yes 708024
chr3 16218261 16218276 FOXA1 JASPAR yes 70945839
chr3 16218262 16218273 FOXC1 JASPAR yes 708025
chr3 16218262 16218273 FOXC1 JASPAR yes 70945840
chr3 16218262 16218274 FOXC2 JASPAR yes 708026
chr3 16218262 16218274 FOXC2 JASPAR yes 70945841
chr3 16218270 16218274 YY1 TRANSFAC yes 708027
chr3 16218270 16218274 YY1 TRANSFAC yes 70945842
chr3 16218280 16218284 LFA1 TRANSFAC yes 708028
chr3 16218280 16218284 LFA1 TRANSFAC yes 70945843
chr3 16218286 16218291 MYC TRANSFAC yes 708029
chr3 16218286 16218291 MYC TRANSFAC yes 70945844
chr3 16218370 16218386 SOX4 JASPAR yes 708030
chr3 16218370 16218386 SOX4 JASPAR yes 70945845
chr3 16218371 16218386 SOX21 JASPAR yes 708031
chr3 16218371 16218386 SOX21 JASPAR yes 70945846
chr3 16218373 16218394 MAFG JASPAR yes 708032
chr3 16218373 16218394 MAFG JASPAR yes 70945847
SNP sites on vista40132[chr3:16218160-16218375]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 16218165 rs75196175 C T
GCM1 GCM2
6579729
chr3 16218225 rs147071568 A G no 6579730
chr3 16218298 rs147664885 A C no 6579731
chr3 16218355 rs73051143 A G no 6579732
Genes possibly regulated by vista40132[chr3:16218160-16218375]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 16216156 16273499 + GALNT15 ENSG00000131386.13 16216156 0.91 1.0 3449 97996
chr3 16299485 16306479 - DPH3 ENSG00000154813.5 16306479 0.71 0.99 3450 11896
chr3 16306706 16391806 + OXNAD1 ENSG00000154814.9 16306706 0.91 0.99 3451 11669
Expression level of Genes
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miRNAs possibly regulated by vista40132[chr3:16218160-16218375]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results