EnhancerDB
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  3. vista40139[chr3:16342509-16342839]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40139[chr3:16342509-16342839]
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Tissue distribution of vista40139
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Transcription factor that possibly regulate vista40139[chr3:16342509-16342839]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 16342510 16342518 GATA3 JASPAR yes 713966
chr3 16342510 16342518 GATA3 JASPAR yes 70946085
chr3 16342518 16342524 GATA3 JASPAR yes 713967
chr3 16342518 16342524 GATA3 JASPAR yes 70946086
chr3 16342555 16342570 AR JASPAR yes 713968
chr3 16342555 16342570 AR JASPAR yes 70946087
chr3 16342571 16342585 EBF1 JASPAR yes 713969
chr3 16342571 16342585 EBF1 JASPAR yes 70946088
chr3 16342572 16342583 EBF1 JASPAR yes 713970
chr3 16342572 16342583 EBF1 JASPAR yes 70946089
chr3 16342573 16342584 EBF1 JASPAR yes 713971
chr3 16342573 16342584 EBF1 JASPAR yes 70946090
chr3 16342611 16342631 TP63 JASPAR yes 713972
chr3 16342611 16342631 TP63 JASPAR yes 70946091
chr3 16342635 16342650 AR JASPAR yes 713973
chr3 16342635 16342650 AR JASPAR yes 70946092
chr3 16342675 16342682 NKX3-1 JASPAR yes 70946093
chr3 16342706 16342710 LFA1 TRANSFAC yes 70946094
chr3 16342721 16342733 PKNOX1 JASPAR yes 70946095
chr3 16342721 16342733 PKNOX2 JASPAR yes 70946096
chr3 16342721 16342733 TGIF1 JASPAR yes 70946097
chr3 16342721 16342733 TGIF2 JASPAR yes 70946098
chr3 16342724 16342728 YY1 TRANSFAC yes 70946099
chr3 16342730 16342741 FLI1 JASPAR yes 70946100
chr3 16342731 16342741 ERF JASPAR yes 70946101
chr3 16342731 16342741 ERG JASPAR yes 70946102
chr3 16342731 16342741 ETS1 JASPAR yes 70946103
chr3 16342731 16342742 ETV2 JASPAR yes 70946104
chr3 16342731 16342742 SPDEF JASPAR yes 70946105
chr3 16342731 16342745 SPI1 JASPAR yes 70946106
chr3 16342778 16342786 GATA3 JASPAR yes 70946107
SNP sites on vista40139[chr3:16342509-16342839]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 16342553 rs137951191 C T no 6580429
chr3 16342701 rs181575458 A C no 6580430
chr3 16342777 rs147116527 T G no 6580431
chr3 16342801 rs138449417 A G no 6580432
Genes possibly regulated by vista40139[chr3:16342509-16342839]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 16299485 16306479 - DPH3 ENSG00000154813.5 16306479 0.71 0.99 3450 63970
chr3 16306706 16391806 + OXNAD1 ENSG00000154814.9 16306706 0.91 0.99 3451 64197
Expression level of Genes
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miRNAs possibly regulated by vista40139[chr3:16342509-16342839]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results