EnhancerDB
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  3. vista40141[chr3:16352603-16353027]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40141[chr3:16352603-16353027]
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Tissue distribution of vista40141
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Transcription factor that possibly regulate vista40141[chr3:16352603-16353027]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 16352596 16352610 TLX1 JASPAR yes 714544
chr3 16352596 16352610 TLX1 JASPAR yes 70946110
chr3 16352603 16352609 MZF1 JASPAR yes 714545
chr3 16352603 16352609 MZF1 JASPAR yes 70946111
chr3 16352608 16352618 MSC JASPAR yes 714546
chr3 16352608 16352618 MSC JASPAR yes 70946112
chr3 16352629 16352649 RREB1 JASPAR yes 714547
chr3 16352629 16352649 RREB1 JASPAR yes 70946113
chr3 16352639 16352650 E2F6 JASPAR yes 714548
chr3 16352639 16352650 E2F6 JASPAR yes 70946114
chr3 16352643 16352654 E2F6 JASPAR yes 714549
chr3 16352643 16352654 E2F6 JASPAR yes 70946115
chr3 16352651 16352665 IRF7 JASPAR yes 714550
chr3 16352651 16352665 IRF7 JASPAR yes 70946116
chr3 16352678 16352693 MEF2C JASPAR yes 714551
chr3 16352678 16352693 MEF2C JASPAR yes 70946117
chr3 16352684 16352699 MEF2A JASPAR yes 714552
chr3 16352684 16352699 MEF2A JASPAR yes 70946118
chr3 16352685 16352697 MEF2A JASPAR yes 714553
chr3 16352685 16352697 MEF2A JASPAR yes 70946119
chr3 16352686 16352696 MEF2A JASPAR yes 714554
chr3 16352686 16352696 MEF2A JASPAR yes 70946120
chr3 16352700 16352704 YY1 TRANSFAC yes 714555
chr3 16352700 16352704 YY1 TRANSFAC yes 70946121
chr3 16352709 16352713 YY1 TRANSFAC yes 714556
chr3 16352709 16352713 YY1 TRANSFAC yes 70946122
chr3 16352726 16352745 PAX5 JASPAR yes 714557
chr3 16352726 16352745 PAX5 JASPAR yes 70946123
chr3 16352730 16352741 NFE2L2 JASPAR yes 714558
chr3 16352730 16352741 NFE2L2 JASPAR yes 70946124
chr3 16352734 16352738 NFE TRANSFAC yes 714559
chr3 16352734 16352738 NFE TRANSFAC yes 70946125
chr3 16352766 16352776 SREBF1 JASPAR yes 714560
chr3 16352766 16352776 SREBF1 JASPAR yes 70946126
chr3 16352781 16352785 NFE TRANSFAC yes 714561
chr3 16352781 16352785 NFE TRANSFAC yes 70946127
chr3 16352781 16352786 GATA1 TRANSFAC yes 714562
chr3 16352781 16352786 GATA1 TRANSFAC yes 70946128
chr3 16352781 16352787 GATA3 JASPAR yes 714563
chr3 16352781 16352787 GATA3 JASPAR yes 70946129
chr3 16352833 16352838 TFAP2A TRANSFAC yes 714564
chr3 16352833 16352838 TFAP2A TRANSFAC yes 70946130
chr3 16352833 16352839 MZF1 JASPAR yes 714565
chr3 16352833 16352839 MZF1 JASPAR yes 70946131
chr3 16352843 16352853 MAX JASPAR yes 714566
chr3 16352843 16352853 MAX JASPAR yes 70946132
chr3 16352843 16352854 USF2 JASPAR yes 714567
chr3 16352843 16352854 USF2 JASPAR yes 70946133
chr3 16352843 16352855 HES5 JASPAR yes 714568
chr3 16352843 16352855 HES7 JASPAR yes 714569
chr3 16352843 16352855 HES5 JASPAR yes 70946134
chr3 16352843 16352855 HES7 JASPAR yes 70946135
chr3 16352854 16352864 SP1 JASPAR yes 714570
chr3 16352854 16352864 SP1 JASPAR yes 70946136
chr3 16352867 16352882 MEF2A JASPAR yes 714571
chr3 16352867 16352882 MEF2A JASPAR yes 70946137
chr3 16352868 16352882 POU4F1 JASPAR yes 714572
chr3 16352868 16352882 POU4F1 JASPAR yes 70946138
chr3 16352868 16352883 MEF2C JASPAR yes 714573
chr3 16352868 16352883 MEF2C JASPAR yes 70946139
chr3 16352869 16352881 MEF2D JASPAR yes 714574
chr3 16352869 16352881 MEF2D JASPAR yes 70946140
chr3 16352871 16352875 YY1 TRANSFAC yes 714575
chr3 16352871 16352875 YY1 TRANSFAC yes 70946141
chr3 16352873 16352883 HOXA13 JASPAR yes 714576
chr3 16352873 16352883 HOXA13 JASPAR yes 70946142
chr3 16352889 16352900 CEBPB JASPAR yes 714577
chr3 16352889 16352900 CEBPB JASPAR yes 70946143
chr3 16352892 16352904 YY1 JASPAR yes 714578
chr3 16352892 16352904 YY1 JASPAR yes 70946144
chr3 16352914 16352932 RARA JASPAR yes 714579
chr3 16352914 16352932 RARA JASPAR yes 70946145
chr3 16352939 16352950 TBX20 JASPAR yes 714580
chr3 16352939 16352950 TBX2 JASPAR yes 714581
chr3 16352939 16352950 TBX20 JASPAR yes 70946146
chr3 16352939 16352950 TBX2 JASPAR yes 70946147
chr3 16352955 16352959 TEAD2 TRANSFAC yes 714582
chr3 16352955 16352959 TEAD2 TRANSFAC yes 70946148
chr3 16352955 16352960 TBP TRANSFAC yes 714583
chr3 16352955 16352960 TBP TRANSFAC yes 70946149
chr3 16352978 16352984 SOX10 JASPAR yes 714584
chr3 16352978 16352984 SOX10 JASPAR yes 70946150
chr3 16352993 16353004 TBX2 JASPAR yes 714585
chr3 16352993 16353004 TBX2 JASPAR yes 70946151
chr3 16352994 16353004 TBR1 JASPAR yes 714586
chr3 16352994 16353004 TBR1 JASPAR yes 70946152
chr3 16353012 16353021 PITX3 JASPAR yes 714587
chr3 16353012 16353021 PITX3 JASPAR yes 70946153
chr3 16353012 16353022 GSC JASPAR yes 714588
chr3 16353012 16353022 GSC JASPAR yes 70946154
chr3 16353020 16353033 SCRT2 JASPAR yes 714589
chr3 16353020 16353033 SCRT2 JASPAR yes 70946155
chr3 16353025 16353038 HSF2 JASPAR yes 714590
chr3 16353025 16353038 HSF2 JASPAR yes 70946156
SNP sites on vista40141[chr3:16352603-16353027]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 16352637 rs10569622 ACTCC A
RREB1
6580525
chr3 16352637 rs565047686 ACTCC A
RREB1
6580526
chr3 16352687 rs7619884 T A
MEF2A MEF2C
6580527
chr3 16352891 rs7652886 G T
CEBPB
6580528
chr3 16352959 rs62233913 A T
TBP TEAD2
6580529
chr3 16352981 rs537979329 T C
SOX10
6580530
chr3 16352990 rs62233914 G A no 6580531
Genes possibly regulated by vista40141[chr3:16352603-16353027]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 16299485 16306479 - DPH3 ENSG00000154813.5 16306479 0.71 0.99 3450 53876
chr3 16306706 16391806 + OXNAD1 ENSG00000154814.9 16306706 0.91 0.99 3451 54103
Expression level of Genes
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miRNAs possibly regulated by vista40141[chr3:16352603-16353027]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results