EnhancerDB
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  3. vista40142[chr3:16373323-16373612]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40142[chr3:16373323-16373612]
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Tissue distribution of vista40142
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Transcription factor that possibly regulate vista40142[chr3:16373323-16373612]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 16373318 16373338 PPARG JASPAR yes 715900
chr3 16373318 16373338 PPARG JASPAR yes 70946157
chr3 16373354 16373374 TP53 JASPAR yes 715901
chr3 16373354 16373374 TP53 JASPAR yes 70946158
chr3 16373355 16373359 YY1 TRANSFAC yes 715902
chr3 16373355 16373359 YY1 TRANSFAC yes 70946159
chr3 16373370 16373376 SOX10 JASPAR yes 715903
chr3 16373370 16373376 SOX10 JASPAR yes 70946160
chr3 16373376 16373386 HMBOX1 JASPAR yes 715904
chr3 16373376 16373386 HMBOX1 JASPAR yes 70946161
chr3 16373376 16373388 HNF1B JASPAR yes 715905
chr3 16373376 16373388 HNF1B JASPAR yes 70946162
chr3 16373378 16373381 MYB TRANSFAC yes 715906
chr3 16373378 16373381 MYB TRANSFAC yes 70946163
chr3 16373410 16373424 ONECUT1 JASPAR yes 715907
chr3 16373410 16373424 ONECUT2 JASPAR yes 715908
chr3 16373410 16373424 ONECUT3 JASPAR yes 715909
chr3 16373410 16373424 ONECUT1 JASPAR yes 70946164
chr3 16373410 16373424 ONECUT2 JASPAR yes 70946165
chr3 16373410 16373424 ONECUT3 JASPAR yes 70946166
chr3 16373411 16373421 PAX3 JASPAR yes 715910
chr3 16373411 16373421 PAX7 JASPAR yes 715911
chr3 16373411 16373421 PAX3 JASPAR yes 70946167
chr3 16373411 16373421 PAX7 JASPAR yes 70946168
chr3 16373411 16373422 PHOX2A JASPAR yes 715912
chr3 16373411 16373422 PROP1 JASPAR yes 715913
chr3 16373411 16373422 PHOX2A JASPAR yes 70946169
chr3 16373411 16373422 PROP1 JASPAR yes 70946170
chr3 16373420 16373425 GATA2 JASPAR yes 715914
chr3 16373420 16373425 GATA2 JASPAR yes 70946171
chr3 16373443 16373458 HSF1 JASPAR yes 715915
chr3 16373443 16373458 HSF1 JASPAR yes 70946172
chr3 16373444 16373457 HSF4 JASPAR yes 715916
chr3 16373444 16373457 HSF4 JASPAR yes 70946173
chr3 16373448 16373463 HSF1 JASPAR yes 715917
chr3 16373448 16373463 HSF1 JASPAR yes 70946174
chr3 16373449 16373462 HSF4 JASPAR yes 715918
chr3 16373449 16373462 HSF4 JASPAR yes 70946175
chr3 16373462 16373473 NRL JASPAR yes 715919
chr3 16373462 16373473 NRL JASPAR yes 70946176
chr3 16373465 16373480 SOX21 JASPAR yes 715920
chr3 16373465 16373480 SOX21 JASPAR yes 70946177
chr3 16373490 16373497 GATA1 TRANSFAC yes 715921
chr3 16373490 16373497 GATA1 TRANSFAC yes 70946178
chr3 16373501 16373505 YY1 TRANSFAC yes 715922
chr3 16373501 16373505 YY1 TRANSFAC yes 70946179
chr3 16373506 16373509 MYB TRANSFAC yes 715923
chr3 16373506 16373509 MYB TRANSFAC yes 70946180
chr3 16373510 16373525 SCRT1 JASPAR yes 715924
chr3 16373510 16373525 SCRT1 JASPAR yes 70946181
chr3 16373512 16373515 MYB TRANSFAC yes 715925
chr3 16373512 16373515 MYB TRANSFAC yes 70946182
chr3 16373512 16373525 SCRT2 JASPAR yes 715926
chr3 16373512 16373525 SCRT2 JASPAR yes 70946183
chr3 16373514 16373520 PTF TRANSFAC yes 715927
chr3 16373514 16373520 PTF TRANSFAC yes 70946184
chr3 16373562 16373575 HSF2 JASPAR yes 715928
chr3 16373562 16373575 HSF2 JASPAR yes 70946185
chr3 16373564 16373578 SPI1 JASPAR yes 715929
chr3 16373564 16373578 SPI1 JASPAR yes 70946186
chr3 16373597 16373617 PPARG JASPAR yes 715930
chr3 16373597 16373617 PPARG JASPAR yes 70946187
SNP sites on vista40142[chr3:16373323-16373612]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 16373417 rs144772637 G A
ONECUT1 ONECUT2 ONECUT3 PAX3 PAX7 PHOX2A PROP1
6580685
chr3 16373424 rs147864945 C A
GATA2 ONECUT1 ONECUT2 ONECUT3
6580686
chr3 16373457 rs139883248 C G
HSF1 HSF4
6580687
chr3 16373511 rs116835323 T G
SCRT1
6580688
chr3 16373571 rs1607226 C T
HSF2 SPI1
6580689
Genes possibly regulated by vista40142[chr3:16373323-16373612]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 16299485 16306479 - DPH3 ENSG00000154813.5 16306479 0.71 0.99 3450 33156
chr3 16306706 16391806 + OXNAD1 ENSG00000154814.9 16306706 0.91 0.99 3451 33383
Expression level of Genes
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miRNAs possibly regulated by vista40142[chr3:16373323-16373612]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results